KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:00:33 2014 Check: 00 .. Name: ENSP00000419235/1-921 Len: 921 Check: 1702 Weight: 1.00 Name: ENSBTAP00000050827/1-921 Len: 921 Check: 2010 Weight: 1.00 Name: bmy_15490T0/1-919 Len: 921 Check: 9821 Weight: 1.00 Name: BACU010934/1-919 Len: 921 Check: 9634 Weight: 1.00 // 1 50 ENSP00000419235/1-921 MATPSAAFEA LMNGVTSWDV PEDAVPCELL LIGEASFPVM VNDMGQVLIA ENSBTAP00000050827/1-921 MATPSAAFEA LMNGVTSWNV PEDAVPCELL LIGEASFPVM VNDMGQVLIA bmy_15490T0/1-919 MATPSAAFEA LMNGVTSWDV PEDAIPCELL LIGEASFPVM VNDMGQVLIA BACU010934/1-919 MATPSAAFEA LMNGVTSWDV PEDAIPCELL LIGEASFPVM VNDMGQVLIA 51 100 ENSP00000419235/1-921 ASSYGRGRLV VVSHEDYLVE AQLTPFLLNA VGWLCSSPGA PIGVHPSLAP ENSBTAP00000050827/1-921 ASSYGRGRLV VVSHEDYLVE AQLTPFLLNA VGWLCSSPGA PVGVHPSLAP bmy_15490T0/1-919 ASSYGRGRLV VVSHEDYLVE AQLTPFLLNA VGWLCSSPGA PVGIHPSLAP BACU010934/1-919 ASSYGRGRLV VVSHEDYLVE AQLTPFLLNA VGWLCSSPGA PVGVHPSLAP 101 150 ENSP00000419235/1-921 LAKILEGSGV DAKVEPEVKD SLGVYCIDAY NETMTEKLVK FMKCGGGLLI ENSBTAP00000050827/1-921 LAKILEGSGV EAKVEPEVKD SLGVYCIDAY NETMTEKLVK FMKRGGGLLI bmy_15490T0/1-919 LAKILEGSGV EAKVEPEVKD SLGVYCIDAY SETMTEKLVK FMKRGGGLLI BACU010934/1-919 LAKILEGSGI EAKVEPEVKD SLGVYCIDAY SETMTEKLVK FMKRGGGLLI 151 200 ENSP00000419235/1-921 GGQAWDWANQ GEDERVLFTF PGNLVTSVAG IYFTDNKGDT SFFKVSKKMP ENSBTAP00000050827/1-921 GGQAWDWANQ GDDERVLFTF PGNLVTSVAG VYFTDNKGDT SFFKVSKKMP bmy_15490T0/1-919 GGQAWDWANQ GDDERVLFTF PGNLVTSVAG VYFTDNKGDT SFFKVSKKMP BACU010934/1-919 GGQAWDWANQ GDDERVLFTF PGNLVTSVAG VYFTDNKGDT SFFKVSKKMP 201 250 ENSP00000419235/1-921 KIPVLVSCED DLSDDREELL HGISELDISN SDCFPSQLLV HGALAFPLGL ENSBTAP00000050827/1-921 KIPVLVSCED DLSEDRDELL HGISELDITN SDCFPSQLLV HGALAFPLGL bmy_15490T0/1-919 KIPVLVSCED DLSEDRDELL HGISELDISN SDCFPSQLLV HGALAFPLGL BACU010934/1-919 KIPVLVSCED DLSEDRDELL HGISELDISN SDCFPSQLLV HGALAFPLGL 251 300 ENSP00000419235/1-921 DSYHGCVIAA ARYGRGRVVV TGHKVLFTVG KLGPFLLNAV RWLDGGRRGK ENSBTAP00000050827/1-921 DSYHGCVIAA ARYGRGRVVV TGHKVLFTVG KLGPFLLNAV RWLDAGRRGK bmy_15490T0/1-919 DSYHGCVIAA ARYGRGRVVV TGHKVLFTVG KLGPFLLNAV RWLDAGRRGK BACU010934/1-919 DSYHGCVIAA ARYGRGRVVV TGHKVLFTVG KLGPFLLNAV RWLDAGRRGK 301 350 ENSP00000419235/1-921 VVVQTELRTL SGLLAVGGID TSIEPNLTSD ASVYCFEPVS EVGVKELQEF ENSBTAP00000050827/1-921 IVVQTELRTL SGLLAVGGID TSIEPNLTSD ASVYCFEPVS DVGVKELQEF bmy_15490T0/1-919 IVVQTELRTL SGLLAVGGID SSIEPNLTSD ASVYCFEPVS DVGVKELQEF BACU010934/1-919 IVVQTELRTL SGLLAVGGID SSIEPNLTSD ASVYCFEPVS DVGVKELQEF 351 400 ENSP00000419235/1-921 VAEGGGLFVG AQAWWWAFKN PGVSPLARFP GNLLLNPFGI SITSQSLNPG ENSBTAP00000050827/1-921 VAEGGGLFVG AQAWWWAFKN PGVSPLARFP GNLLLNPFGI SITSQSLNPG bmy_15490T0/1-919 VAEGGGLFVG AQAWWWAFKN PGVSPLARFP GNLLLNPFGI SITSQSLNPG BACU010934/1-919 VAEGGGLFVG AQAWWWAFKN PGVSPLARFP GNLLLNPFGI SITSQSLNPG 401 450 ENSP00000419235/1-921 PFRTPKAGIR TYHFRSTLAE FQVIMGRKRG NVEKGWLAKL GPDGAAFLQI ENSBTAP00000050827/1-921 PFRTPKAGIR TYHFRSTLAE FQVIMGRKRG NVEKGWLAKL GPDGAAFLQI bmy_15490T0/1-919 PFRTPKAGIR TYHFRSTLAE FQVIMGRKRG NVEKGWLAKL GPDGAAFLQI BACU010934/1-919 PFRTPKAGIR TYHFRSTLAE FQVIMGRKRG NVEKGWLAKL GPDGAAFLQI 451 500 ENSP00000419235/1-921 PAEEIPAYMS VHRLLRKLLS RYRLPVATRE NPVINDCCRG AMLSLATGLA ENSBTAP00000050827/1-921 PAEEIPAYMS VHRLLRKLLS RYRLPVATRE NPVINDCCRG AMLSLATGLA bmy_15490T0/1-919 PAEEIPAYMS VHRLLRKLLS RYRLPVATRE NPVINDCCRG AMLSLATGLA BACU010934/1-919 PAEEIPAYTS VHRLLRKLLS RYRLPVATRE NPVINDCCRG AMLSLATGLA 501 550 ENSP00000419235/1-921 HSGSDLSLLV PEIEDMYSSP YLRPSESPIT VEVNCTNPGT RYCWMSTGLY ENSBTAP00000050827/1-921 HSGSDLSLLV PEIEDMYSSP YLRPSESPIT VEVNCNNPGT RYCWMSTGLY bmy_15490T0/1-919 HSGSDLSLLV PEIEDMYSSP YLRPSESPIT VEVNCNNPGT RYCWMSTGLY BACU010934/1-919 HSGSDLSLLV PEIEDMYSSP YLRPSESPIT VEVNCNNPGT RYCWMSTGLY 551 600 ENSP00000419235/1-921 IPGRQIIEVS LPEAAASADL KIQIGCHTDD LTRASKLFRG PLVINRCCLD ENSBTAP00000050827/1-921 IPGRQIIEVS LPEAAASADL KIQIGCHTDD LTRASKLFRG PLVINRCCLD bmy_15490T0/1-919 IPGRQIIEVS LPEAAASADL KVQIGCHTDD LTRASKLFRG PLVINRCCLD BACU010934/1-919 IPGRQIIEVS LPEAAASADL KVQIGCHTDD LTRASKLFRG PLVINRCCLD 601 650 ENSP00000419235/1-921 KPTKSITCLW GGLLYIIVPQ NSKLGSVPVT VKGAVHAPYY KLGETTLEEW ENSBTAP00000050827/1-921 KPTKSITCLW GGLLYIIVPQ SSKLGTVPVT IKGAVRAPYY KLGETTQEEW bmy_15490T0/1-919 KPTKSITCLW GGLLYIIVPQ SSKLGSVPVT VKGAVHAPYY RLGETSQEEW BACU010934/1-919 KPTKSITCLW GGLLYIIVPQ SSKLGSVPVT VKGAVHAPYY RLGETSQEEW 651 700 ENSP00000419235/1-921 KRRIQENPGP WGELATDNII LTVPTANLRT LENPEPLLRL WDEVMQAVAR ENSBTAP00000050827/1-921 KRQIQENPGP WGELATDNII LTVPTANLRT LENPEPLLRL WDEVMQAVAR bmy_15490T0/1-919 KRRIQENPGP WGELATDNII LTVPTANLRT LENPEPLLRL WDEVMQAVAR BACU010934/1-919 KRRIQENPGP WGELATDNII LTVPTANLRT LENPEPLLRL WDEVMQAVAR 701 750 ENSP00000419235/1-921 LGAEPFPLRL PQRIVADVQI SVGWMHAGYP IMCHLESVQE LINEKLIRTK ENSBTAP00000050827/1-921 LGAEPFPLRL PQRIVADVQI SVGWMHAGYP IMCHLESVQE LINEKLIRTK bmy_15490T0/1-919 LGAEPFPLRL PQRIVADVQI SVGWMHAGYP IMCHLESVQE LISEKLIRTK BACU010934/1-919 LGAEPFPLRL PQRIVADVQI SVGWMHAGYP IMCHLESVQE LISEKLIRTK 751 800 ENSP00000419235/1-921 GLWGPVHELG RNQQRQEWEF PPHTTEATCN LWCVYVHETV LGIPRSRANI ENSBTAP00000050827/1-921 GLWGPVHELG RNQQRQEWEF PPHTTEATCN LWCVYVHETV LGIPRGRANI bmy_15490T0/1-919 GLWGPVHELG RNQQRQEWEF PPHTTEATCN LWCVYVHETV LGIPRGRANI BACU010934/1-919 GLWGPVHELG RNQQRQEWEF PPHTTEATCN LWCVYVHETV LGIPRGRANI 801 850 ENSP00000419235/1-921 ALWPPVREKR VRIYLSKGPN VKNWNAWTAL ETYLQLQEAF GWEPFIRLFT ENSBTAP00000050827/1-921 ALWPPVREKR VRIYLGKGPN VKNWNAWTAL ETYLQLQEAF GWEPFIRLFT bmy_15490T0/1-919 ALWPPVREKR VRIYLGKGPN VKNWNAWTAL ETYLQLQEAF GWEPFIRLFT BACU010934/1-919 ALWPPVREKR VRIYLGKGPN VKNWNAWTAL ETYLQLQEAF GWEPFIRLFT 851 900 ENSP00000419235/1-921 EYRNQTNLPT ENVDKMNLWV KMFSHQVQKN LAPFFEAWAW PIQKEVATSL ENSBTAP00000050827/1-921 EYRNQTNLPT DNVDKMNLWV KMFSHQVQKN LAPFFEAWAW PIQKEVATSL bmy_15490T0/1-919 EYRNQTNLPT DNVDKMNLWV KMFSHQVQKN LAPFFEAWAW PIQKEVATSL BACU010934/1-919 EYRNQTNLPT DNVDKMNLWV KMFSHQVQKN LAPFFEAWAW PIQKEVATSL 901 950 ENSP00000419235/1-921 AYLPEWKENI MKLYLLTQMP H ENSBTAP00000050827/1-921 AYLPEWKENI MKLYLLTQMP H bmy_15490T0/1-919 AYLPEWKENI MKLYLLTQM- - BACU010934/1-919 AYLPEWKENI MKLYLLTQM- -