KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:34 2014 Check: 00 .. Name: ENSBTAP00000050839/1-603 Len: 603 Check: 6262 Weight: 1.00 Name: ENSP00000357810/1-593 Len: 603 Check: 9059 Weight: 1.00 Name: ENSTTRP00000002953/1-590 Len: 603 Check: 4201 Weight: 1.00 Name: bmy_18545T0/1-593 Len: 603 Check: 9477 Weight: 1.00 Name: BACU007263/1-593 Len: 603 Check: 9614 Weight: 1.00 // 1 50 ENSBTAP00000050839/1-603 ILCSRNKEGM AVATAPKQAW PPWPPVFFLL LLPALGSSGN CPAVCDCTSQ ENSP00000357810/1-593 ---------M DAATAPKQAW PPWPPLLFLL LLPG-GSGGS CPAVCDCTSQ ENSTTRP00000002953/1-590 ---------M AAATTPKQA- --WPPIFFLL LLSG-GSSGG CPAVCDCTSQ bmy_18545T0/1-593 ---------M AAATTPKQAW PPWPPIFFLL LLSG-GSSGG CPAVCDCTSQ BACU007263/1-593 ---------M AAATTPKQAW PPWPPIFFLL LLSG-GSSGG CPAVCDCTSQ 51 100 ENSBTAP00000050839/1-603 PQAVLCAHRR LEAVPGGLPL DTELLDLSGN RLWGLQQGML SRLGQLRELD ENSP00000357810/1-593 PQAVLCGHRQ LEAVPGGLPL DTELLDLSGN RLWGLQQGML SRLSLLQELD ENSTTRP00000002953/1-590 PRAVLCAHRR LEAVPGGLPL DTELLDLSGN RLWGLQRGML SRLGLLRELD bmy_18545T0/1-593 PRAVLCAQRR LEAVPGGLPL DTELLDLSGN RLWGLQRGML SHLGLLRELD BACU007263/1-593 PRAVLCAQRR LEVVPGGLPL DTELLDLSGN RLWGLQRGML SRLGLLRELD 101 150 ENSBTAP00000050839/1-603 LSYNQLSTLE PGAFHGLRSL LTLRLQGNRL RIMGPGVFAG LSALTLLDLR ENSP00000357810/1-593 LSYNQLSTLE PGAFHGLQSL LTLRLQGNRL RIMGPGVFSG LSALTLLDLR ENSTTRP00000002953/1-590 LSYNQLSTLE PGAFHGLQSL LTLRLQGNRL RIVGPRVFSG LSSLTLLDIR bmy_18545T0/1-593 LSYNQLSTLE PGAFHGLQGL LTLRLQGNRL RIMGPGVFSG LSALTLLDIR BACU007263/1-593 LSYNQLSTLE PGAFHGLQGL LTLRLQGNRL RIMGPGVFSG LSALTLLDIR 151 200 ENSBTAP00000050839/1-603 LNQIVLFLDG AFRELGSLQQ LEVGDNHLVF VAPGAFAGLA KLSTLTLERC ENSP00000357810/1-593 LNQIVLFLDG AFGELGSLQK LEVGDNHLVF VAPGAFAGLA KLSTLTLERC ENSTTRP00000002953/1-590 LNQIVLFLDG AFGELGSLQQ LEVGDNHLVF VAPGAFAGLA KLSTFTLERC bmy_18545T0/1-593 LNQIVLFLDG AFGELGSLQQ LEAGDNHLVF VAPGAFAGLA KLSTLTLERC BACU007263/1-593 LNQIVLFLDG AFGELGSLQQ LEAGDNHLVF VAPGAFAGLA KLSTLTLERC 201 250 ENSBTAP00000050839/1-603 NLSTVPGPAL ARLPALGALK LRELDIGRLP AGALRGLGQL RELEIHHWPA ENSP00000357810/1-593 NLSTVPGLAL ARLPALVALR LRELDIGRLP AGALRGLGQL KELEIHLWPS ENSTTRP00000002953/1-590 NLSTVPGPAL ARLPALGVLR LRELDIGRLP GGALQGLGQL KELEIHHWPP bmy_18545T0/1-593 NLSTVPGPAL ARLPALGALR LRELDIGRLP GGVLRGLGQL KELEIHHWPS BACU007263/1-593 NLSAVPGPAL ARLPALGALS LRELDIGRLP GGALRGLGRL KELEIHHWPS 251 300 ENSBTAP00000050839/1-603 LEALEPGSLG GLNLSSLAIT HCNLSSVPFQ ALHHLSFLRA LDLSRNPISA ENSP00000357810/1-593 LEALDPGSLV GLNLSSLAIT RCNLSSVPFQ ALYHLSFLRV LDLSQNPISA ENSTTRP00000002953/1-590 LEALEPGSLT GLNLSSLAIT RCNLSSVPFQ ALHHLSFLRV LDLSQNPISA bmy_18545T0/1-593 LEALEPGSLT GLNLSSLAIT RCNLSSVPFQ ALHHLSFLRV LDLSQNPISA BACU007263/1-593 LEALEPGSLT GLNLSSLAIT RCNLSSVPSQ ALHHLSFLRV LDLSQNPISA 301 350 ENSBTAP00000050839/1-603 IPARRLSSLV RLQELRLSGA CLTSIAAHAF HGLTAFHLLD VADNALQTLE ENSP00000357810/1-593 IPARRLSPLV RLQELRLSGA CLTSIAAHAF HGLTAFHLLD VADNALQTLE ENSTTRP00000002953/1-590 IPARRLSPLV RLQELRLSGA CLTSIAAHAF HGLTAFHLLD VADNALQTLE bmy_18545T0/1-593 IPAQRLSPLV RLQELRLSGA CLTSIAAHAF HGLTAFHLLD VADNALQTLE BACU007263/1-593 IPARGLSPLV RLQELRLSGA CLTSIAAHAF HGLTAFHLLD VADNALQTLE 351 400 ENSBTAP00000050839/1-603 ETAFPSPDKL VTLRLSGNPL TCDCRLLWLL RLRRRLDFGS TPPACAGPQH ENSP00000357810/1-593 ETAFPSPDKL VTLRLSGNPL TCDCRLLWLL RLRRHLDFGM SPPACAGPHH ENSTTRP00000002953/1-590 ETAFSSPDKL VTLRLSGNPL TCDCRLVWLL RLRRRLDFGT SPPACAGPQN bmy_18545T0/1-593 ETAFPSPDKL VTLRLSGNPL TCDCRLVWLL RLHRHLDFGT SPPACASPQH BACU007263/1-593 ETAFPSPDKL VTLRLSGNPL TCDCRLVWLL RLRRRLDFGM SPPACAGPQH 401 450 ENSBTAP00000050839/1-603 VQGKSLREFA DILPPGHFTC RPALIRKSGP RWVMAEEGGH AVFSCSGDGD ENSP00000357810/1-593 VQGKSLKEFS DILPPGHFTC KPALIRKSGP RWVIAEEGGH AVFSCSGDGD ENSTTRP00000002953/1-590 VQGKSLREFS DILPPGHFTC QPALIRKSGP RWVIAEEGGH AVFSCSGDGD bmy_18545T0/1-593 VQGKSLREFL DILPPGHFTC QPALIRKSGP RWVIAEEGGH AVFSCSGDGD BACU007263/1-593 VQGKSLREFL DILPPGHFTC QPALIRKSGP RWVIAEEGGH AVFSCSGDGD 451 500 ENSBTAP00000050839/1-603 PAPTVSWMRP QGVRLGRAGR VRVLQDGTLE IRSVQLRDRG AYVCVVSNVA ENSP00000357810/1-593 PAPTVSWMRP HGAWLGRAGR VRVLEDGTLE IRSVQLRDRG AYVCVVSNVA ENSTTRP00000002953/1-590 PAPIVSWMRP QGAWLGRAGR VRVLEDGTLE IRSVQLRDRG AYVCVVSNVA bmy_18545T0/1-593 PAPIVSWMRP QGAWLGRAGR VRVLEDGTLE IRSVQLRDRG AYVCVVSNVA BACU007263/1-593 PAPIVSWMRP QGAWLGRAGR VRVLEDGTLE IRSVQLRDRG AYVCVVSNVA 501 550 ENSBTAP00000050839/1-603 GNDSLRTWLE VIQVEPPNGT LSDPNSTSPG IPGPFFLDSR GIAMVLAVGF ENSP00000357810/1-593 GNDSLRTWLE VIQVEPPNGT LSDPNITVPG IPGPFFLDSR GVAMVLAVGF ENSTTRP00000002953/1-590 GNDSLRTWLE VIQVEPPNST LSDPNITMPG IPGLFFLDSR GIAMVLAVGF bmy_18545T0/1-593 GNDSLRTWLE VIQVEPPNST LSDPNITMPG IPGPFLLDSR GIAMVLAVGF BACU007263/1-593 GNDSLRTWLE VIQVEPPNST LSDPNITMPG IPGPFLLDSR GIAMVLAVGF 551 600 ENSBTAP00000050839/1-603 LPFLTSVTLC FGLIALWSKG KGRVKHHVTF DFVAPRTSGD KNSGGNRVTA ENSP00000357810/1-593 LPFLTSVTLC FGLIALWSKG KGRVKHHMTF DFVAPRPSGD KNSGGNRVTA ENSTTRP00000002953/1-590 LPFLTSVTLC FGLIALWSKG KGRVKHHMTF DFVAPRASGD KNSGGNRVTA bmy_18545T0/1-593 LPFLTSVTLC FGLIALWSKG KGRVKHHMTF DFVAPRTSGD KNSGGNRVTA BACU007263/1-593 LPFLTSVTLC FGLIALWSKG KGRVKHHMTF DFVAPRTSGD KNSGGNRVTA 601 650 ENSBTAP00000050839/1-603 KLF ENSP00000357810/1-593 KLF ENSTTRP00000002953/1-590 KLF bmy_18545T0/1-593 KLF BACU007263/1-593 KLF