KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:35 2014 Check: 00 .. Name: ENSTTRP00000003090/1-502 Len: 520 Check: 511 Weight: 1.00 Name: BACU018730/1-434 Len: 520 Check: 1789 Weight: 1.00 Name: ENSP00000240651/1-500 Len: 520 Check: 5239 Weight: 1.00 Name: bmy_21821T0/1-493 Len: 520 Check: 9105 Weight: 1.00 Name: ENSBTAP00000050877/1-502 Len: 520 Check: 8959 Weight: 1.00 // 1 50 ENSTTRP00000003090/1-502 MEAVRAPPTA GKFVVVGGGI AGVTCA-EQL AIHFPSEDIL LITASPVIKA BACU018730/1-434 ---------- ---------- ---------- ---------- ---------- ENSP00000240651/1-500 MEAARPPPTA GKFVVVGGGI AGVTCA-EQL ATHFPSEDIL LVTASPVIKA bmy_21821T0/1-493 --------MA SKL--LGETQ SGLNPALVLL AIHFPSEDIL LITASPVIKA ENSBTAP00000050877/1-502 MEAPCSPPTA GKFVVVGGGI AGVTCA-EQL AINFPSEDIL LITASPVIKA 51 100 ENSTTRP00000003090/1-502 VTNFKQVSKV LEEFDVEEQP STMLGNRFPN IKIIESGVKQ LNSKEHCILT BACU018730/1-434 ----MQVSKV LEEFDVEEQP STMLENRFPN IKVIESGVKQ LNSKEHCILT ENSP00000240651/1-500 VTNFKQISKI LEEFDVEEQS STMLGKRFPN IKVIESGVKQ LKSEEHCIVT bmy_21821T0/1-493 VTNFKQVSKV LEEFDVEEQP STMLENRFPN IKVIESGVKQ LNSKEHCILT ENSBTAP00000050877/1-502 VTNFKQVSKV LEEFDVEEQP STMLENRFPN IKVIESGVKQ LKSKEHCVLT 101 150 ENSTTRP00000003090/1-502 EDGNQHIYKK LCLCAGAKPK LICEGNPYVL GIRDTDSAQE FQKQLTKAKR BACU018730/1-434 EDGNQHIYKK LCLCAGAKPK LICEENPYVL GIRDTDSAQE FQKQLTKAKR ENSP00000240651/1-500 EDGNQHVYKK LCLCAGAKPK LICEGNPYVL GIRDTDSAQE FQKQLTKAKR bmy_21821T0/1-493 EDGNQHIYKK LCLCAGAKPK LICEENPYVL GIRDTDSAQE FQKQLTKAKR ENSBTAP00000050877/1-502 EDGNQHIYKK LCLCAGAKPK LICEGNPYVL GIRDTDSAQE FQKQLTKAKR 151 200 ENSTTRP00000003090/1-502 IMIIGNGGIA LELV------ ---------X XXXXXXXXXX XXXXXXXXXX BACU018730/1-434 IMIIGNGGIA LELVYKDFFL PSNFHISFRY EIEGCEVIWA IKDKAIGNTF ENSP00000240651/1-500 IMIIGNGGIA LELV------ ---------Y EIEGCEVIWA IKDKAIGNTF bmy_21821T0/1-493 IMIIGNGGIA LELV------ ---------Y EIEGCEVIWA IKDKAIGNTF ENSBTAP00000050877/1-502 IMIIGNGGIA LELV------ ---------Y EIEGCEVIWV IKDKAIGNTF 201 250 ENSTTRP00000003090/1-502 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU018730/1-434 FDAGAAEFLT SKLIAEKPEA KIAQKRTRYT TEVTQIILSR SIMVTSISFI ENSP00000240651/1-500 FDAGAAEFLT SKLIAEKSEA KIAHKRTRYT TEGRKKEARS KSKADNVGSA bmy_21821T0/1-493 FDAGAAEFLT SKLIAEKPEA KIAQKRTRYT TEGRKKEAET KANAGNIGSA ENSBTAP00000050877/1-502 FDAGAAEFLT SKLIDEKPEA KIAQKRTRYT TEGRKKETQA RASAGNVGSA 251 300 ENSTTRP00000003090/1-502 XXXXXXXXXX XXXXXXFSHK IHIETMCEVK KIYLQEEFRI SKKKSLTFPR BACU018730/1-434 ---------- ------FSHK IHIETMCEVK KIYLQEEFRI SKKKSLTFPR ENSP00000240651/1-500 LGPDWHEGLN LKGTKEFSHK IHLETMCEVK KIYLQDEFRI LKKKSFTFPR bmy_21821T0/1-493 LGPDWHEGLD LKGTKEFSHK IHIETMCEVK KIYLQEEFRI SKKKSLTFPR ENSBTAP00000050877/1-502 LGPDWHEGLD LKGTKEFSHK IHIETMCEVK KIYLQEEFRI SEKKSLTFPR 301 350 ENSTTRP00000003090/1-502 DHHNQLVIAD KXX--XXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU018730/1-434 DHHNQLVIAD KDLLKFLFYT PMRTTQKYTH PNLLYGISHC SEFFEFFH-- ENSP00000240651/1-500 DH--KSVTAD TEM--WPVYV ELTNEKIYGC DFIVSATGVT PNVEPFLHGN bmy_21821T0/1-493 DHHNQLVIAD QEI--WPVYV ELTNEKIYGC DFIVSATGVT PNTEPFLCGN ENSBTAP00000050877/1-502 DHHDQSVTTD KEI--WPVYV ELTNEKIYGC DFIVSATGVT PNTEPFLCGN 351 400 ENSTTRP00000003090/1-502 XFDVAKDGGL KVDDHMHTSL PDIYAAGDIC TASWQPSPVW QQMRLWTQAR BACU018730/1-434 ---------- ----RKRESL PDIYAAGDIC TASWQPSPVW QQMRLWTQAR ENSP00000240651/1-500 SFDLGEDGGL KVDDHMHTSL PDIYAAGDIC TTSWQLSPVW QQMRLWTQAR bmy_21821T0/1-493 NFDVGKDGGL KVDDHMHTSL PDIYAAGDIC TASWQPSPVW QQMRLWTQAR ENSBTAP00000050877/1-502 NFDVGEDGGL KVDDHMHTSL PDIYAAGDIC TAAWHPSPVW QQMRLWTQAR 401 450 ENSTTRP00000003090/1-502 QMGWYAAKCM AAASAGESTD MDFSFELFAH VTKFFNYKVV LLGKYNAQGL BACU018730/1-434 QMGWYAAKCM AAASVGESTD MDFSFELFAH VTKFFNYKVV LLGKYNAQGL ENSP00000240651/1-500 QMGWYAAKCM AAASSGDSID MDFSFELFAH VTKFFNYKVV LLGKYNAQGL bmy_21821T0/1-493 QMGWYAAKCM AAASVGESTD MDFSFELFAH VTKFFNYKVV LLGKYNAQGL ENSBTAP00000050877/1-502 QMGWYAAKCM AAASVGESID MDFSFELFAH VTKFFNYKVV LLGKYNAQGL 451 500 ENSTTRP00000003090/1-502 GLDHELILRC TKGQEYIKAV LQNGRMMGAV LIGETDLEET FENLILNQMN BACU018730/1-434 GLDHELILRC TKGQEYIKAV LQNGRMMGAV LIGETDLEET FENLILNQMN ENSP00000240651/1-500 GSDHELMLRC TKGREYIKVV MQNGRMMGAV LIGETDLEET FENLILNQMN bmy_21821T0/1-493 GLDHELILRC TKGQEYIKAV LQNGRMMGAV LIGXTDLEET FENLILNQMN ENSBTAP00000050877/1-502 GSNHELLLRC TKGQEYIKAV LQNGRMMGAV LIGETDLEET FENLILNQMN 501 550 ENSTTRP00000003090/1-502 LSAYGEDLLD PNIDIEDYFD BACU018730/1-434 LSAYGEDLLD PNIDIEDYFD ENSP00000240651/1-500 LSSYGEDLLD PNIDIEDYFD bmy_21821T0/1-493 LSAYGEDLLD PNIDIEDYFD ENSBTAP00000050877/1-502 LSAYGEDLLD PNIDIEDYFD