KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:36 2014 Check: 00 .. Name: bmy_15162T0/1-704 Len: 978 Check: 1108 Weight: 1.00 Name: ENSBTAP00000050885/1-807 Len: 978 Check: 3788 Weight: 1.00 Name: BACU018429/1-914 Len: 978 Check: 9879 Weight: 1.00 Name: ENSP00000303634/1-963 Len: 978 Check: 9089 Weight: 1.00 Name: ENSTTRP00000000974/1-945 Len: 978 Check: 4463 Weight: 1.00 // 1 50 bmy_15162T0/1-704 ---------- ---------- ---------- ---------- ---LGTCRGD ENSBTAP00000050885/1-807 MGRPERGALR PLA-----LL LLLLQLQHLA AAAADPLHGG QGSVKECDEN BACU018429/1-914 ---------- ---------- ---------- ---------- -GSVKECEED ENSP00000303634/1-963 MGLPEPGPLR LLALLLLLLL LLLLQLQHLA AAAADPLLGG QGPAKDCEKD ENSTTRP00000000974/1-945 LCCPVRGALR ALA---LLLL LLLLQLHHL- EGVGDSLRGC QGSVKECEED 51 100 bmy_15162T0/1-704 EFQCGDGTCV PAIKRCNQEQ DCPDRSDEAG CLQEST---- ---------- ENSBTAP00000050885/1-807 QFRCRNERCI PSVWRCDEDD DCSDNSDEDD CPKKTCADSD FTCNNGHCIR BACU018429/1-914 QFRCRNERCI PSVWRCDEDD DCSDNSDEDD CPKKTCADSD FTCDDGHCIR ENSP00000303634/1-963 QFQCRNERCI PSVWRCDEDD DCLDHSDEDD CPKKTCADSD FTCDNGHCIH ENSTTRP00000000974/1-945 QFRCRNERCI PSVWRCDEDD DCSDNSDEDD CPKKTCADSD FTCDDGHCIR 101 150 bmy_15162T0/1-704 ---------- ---------- ---------- ---------- -------CEG ENSBTAP00000050885/1-807 ERWKCDGEED CPDGSDESEA TCTKQVCPAE KLSCGPTSHK CVPASWRCDG BACU018429/1-914 ERWKCDGEEE CPDGSDESEA TCTKQVCPTE KLSCGPTSHK CVPASWRCDG ENSP00000303634/1-963 ERWKCDGEEE CPDGSDESEA TCTKQVCPAE KLSCGPTSHK CVPASWRCDG ENSTTRP00000000974/1-945 ERWKCDGEEE CPDGSDESEA TCTKQVCPAE KLSCGPTSHK CVPASWRCDG 151 200 bmy_15162T0/1-704 PR-------- ---------- ---------- ---------- ---------- ENSBTAP00000050885/1-807 EKDCESGADE AGCAT----- ---------- ---------- ---------- BACU018429/1-914 EKDCESGVDE AGCATWPQAG PVTCALNYCT SLNYSSHLGV PASVHTTPTH ENSP00000303634/1-963 EKDCEGGADE AGCATLCAPH EFQCGNRSCL AAVFVCDGDD DCGDGSDERG ENSTTRP00000000974/1-945 EKDCESGVDE AGCATLCAPH EFQCSNRSCL AAVFVCDGDD DCGDGSDERG 201 250 bmy_15162T0/1-704 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000050885/1-807 ---------- ---------- ---------- ---------- ---------- BACU018429/1-914 CRELLCARPS EQKWISLRAH PHAVCGHGAD REGHKTQTPE QAVKGTRKES ENSP00000303634/1-963 CADPACGPRE ----FRCGGD GGGACIPERW VCDRQFDCED RSDEAAELCG ENSTTRP00000000974/1-945 CADPACGPRE ----FRCGGD -GGACIPERW VCDRQFDCED RSDEAAELCG 251 300 bmy_15162T0/1-704 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000050885/1-807 ---------- ---------- ---------- ---------- --------SL BACU018429/1-914 GGGWKLAKQG STKCVMKEFA CRSGECVHLG WRCDGDRDCK DKSDEADCPL ENSP00000303634/1-963 RPGPGATSAP AACATASQFA CRSGECVHLG WRCDGDRDCK DKSDEADCPL ENSTTRP00000000974/1-945 RAGPRATSAP ATCAAAAQFA CRSGECVHLG WRCDGDRDCK DKSDEADCPL 301 350 bmy_15162T0/1-704 ------RFQC KSGECVDGGK VCDAQRDCRD WSDEPLKECG LNECLHNNGG ENSBTAP00000050885/1-807 GTCRGDEFQC GDGTCVPAIK RCNQEQDCPD GSDETGCLQG LNECLHNNGG BACU018429/1-914 GTCRGDEFQC GDGTCVPAVK RCNQEQDCPD RSDEAGCLQG LNECLHNNGG ENSP00000303634/1-963 GTCRGDEFQC GDGTCVLAIK HCNQEQDCPD GSDEAGCLQG LNECLHNNGG ENSTTRP00000000974/1-945 GTCRGDEFRC GDGTCVPAIK RCNQEQDCPD RSDEAGCLR- LNECLHNNGG 351 400 bmy_15162T0/1-704 CSHICTDLKI GFECTCPSGY RLLDQKTCGD IDECEDPDAC SQICVNYKGY ENSBTAP00000050885/1-807 CSHICTDLKI GFECTCPAGY QLLDQKTCGD IDECEDPDAC SQICVNYKGY BACU018429/1-914 CSHICTDLKI GFECTCPSGY RLLDQKTCGD IDECEDPDAC SQICVNYKGY ENSP00000303634/1-963 CSHICTDLKI GFECTCPAGF QLLDQKTCGD IDECKDPDAC SQICVNYKGY ENSTTRP00000000974/1-945 CSHICTDLKI GFECTCPSGY RLLDQKTCGD IDECEDPDAC SQICVNYKGY 401 450 bmy_15162T0/1-704 FKCECHPGYE MDTLTKNCKA VAGRSPSLIF TNRHEVRRID LVKRDYSRLI ENSBTAP00000050885/1-807 FKCECHPGYE MDTLTKNCKA VAGRSPSLIF TNRHEVRRID LVKRDYSRLI BACU018429/1-914 FKCECHPGYE MDTLTKNCKA VAGRSPSLIF TNRHEVRRID LVKRDYSRLI ENSP00000303634/1-963 FKCECYPGYE MDLLTKNCKA AAGKSPSLIF TNRHEVRRID LVKRNYSRLI ENSTTRP00000000974/1-945 FKCECHPGYE MDTLTKNCKA VAGRSPSLIF TNRHEVRRID LVKRDYSRLI 451 500 bmy_15162T0/1-704 PMLKNVVALD VEVATNRIYW CDLSYRKIYS AYMDKASDPT EQEVLIDEQL ENSBTAP00000050885/1-807 PMLKNVVALD VEVATNRIYW CDLSYRKIYS AYMDKASNPV EQDVLIDEQL BACU018429/1-914 PMLKNVVALD VEVATNRIYW CDLSYRKIYS AYMDKASDPT EQEVLIDEQL ENSP00000303634/1-963 PMLKNVVALD VEVATNRIYW CDLSYRKIYS AYMDKASDPK EQEVLIDEQL ENSTTRP00000000974/1-945 PMLKNVVALD VEVATNRIYW CDLSYRKIYS AYMDKASDPA EQEVLIDEQL 501 550 bmy_15162T0/1-704 HSPEGLAVDW VHKHIYWTDS GNKTISVATV DGGRRCTLFS RDLSEPRAIA ENSBTAP00000050885/1-807 HSPEGLAVDW VHKHIYWTDS GNKTISVATV DGKRRCTLFS RNLSEPRAIA BACU018429/1-914 HSPEGLAVDW VHKHIYWTDS GNKTISVATV DGGRRCTLFS RDLSEPRAIA ENSP00000303634/1-963 HSPEGLAVDW VHKHIYWTDS GNKTISVATV DGGRRRTLFS RNLSEPRAIA ENSTTRP00000000974/1-945 HSPEGLAVDW VHKHIYWTDS GNKTISVATV DGGRRCTLFS RDLSEPRAIA 551 600 bmy_15162T0/1-704 VDPLRGFVYW SDWGYEAKIE KSGLNGMHRQ TLVSDGIEWP NGITLDLLSQ ENSBTAP00000050885/1-807 VDPLQGFMYW SDWGFQAKIE KSGLNGVGRQ TLVSDGIEWP NGITLDLLNQ BACU018429/1-914 VDPLRGFVYW SDWGYKAKIE KSGLNGMHRQ TLVSDGIEWP NGITLDLLNQ ENSP00000303634/1-963 VDPLRGFMYW SDWGDQAKIE KSGLNGVDRQ TLVSDNIEWP NGITLDLLSQ ENSTTRP00000000974/1-945 VDPLRGFVYW SDWGYEAKIE KSGLNGVHRQ TLVSDGIEWP NGITLDLLNQ 601 650 bmy_15162T0/1-704 RLYWVDSKLH QLSSIDFSGG NRKMLISSPD FLSHPFGIAV FEDKVFWTDL ENSBTAP00000050885/1-807 RLYWVDSKLH QLSSIDFSGG NRKMLISSPD FLSHPFGIAV FEDKVFWTDL BACU018429/1-914 RLYWVDSKLH QLSSIDFSGG NRKMLISSPD FLSHPFGIAV FEDKVFWTDL ENSP00000303634/1-963 RLYWVDSKLH QLSSIDFSGG NRKTLISSTD FLSHPFGIAV FEDKVFWTDL ENSTTRP00000000974/1-945 RLYWVDSKLH QLSSIDFSGG NRKMLISSPD YLSHPFGIAV FEDKVFWTDL 651 700 bmy_15162T0/1-704 ENEAIFSANR LNGLEISVLA ENLNNPHDIV IFHELKQPRA ADACELSAQP ENSBTAP00000050885/1-807 ENEAIFSANR LNGLEISVLA ENLNNPHDIV IFHELKQPRA ADACELSAQP BACU018429/1-914 ENEAIFSANR LNGLEISVLA ENLNNPHDIV IFHELKQPRA ADACELSAQP ENSP00000303634/1-963 ENEAIFSANR LNGLEISILA ENLNNPHDIV IFHELKQPRA PDACELSVQP ENSTTRP00000000974/1-945 ENEAIFSANR LNGLEISVLA ENLNNPHDIV IFHELKQPRA ADACELSAQP 701 750 bmy_15162T0/1-704 NGGCEYLCLP APQISSHSPK YTCACPDTMR LGPDMKRCYR APQSTSTTTL ENSBTAP00000050885/1-807 NGGCEYLCLP APQISSHSPK YTCACPDTMW LGPDMKRCYR APQSTSTTTL BACU018429/1-914 NGGCEYLCLP APQISSHSPK YTCACPDTMR LGPDMKRCYR APQSTSTTTL ENSP00000303634/1-963 NGGCEYLCLP APQISSHSPK YTCACPDTMW LGPDMKRCYR APQSTSTTTL ENSTTRP00000000974/1-945 NGGCEYLCLP APQMSSHSPK YTCACPDTMR LGPDMKRCYR APQSTSTTTL 751 800 bmy_15162T0/1-704 ASTTTRTVAD TTRAPGTTVR SPAYQNHSTE TPSLAAAVPS SVSVPRAPSI ENSBTAP00000050885/1-807 ASTTARTLAD TTRAPGTTNH SPTYQNHSTE TPSLATEVPS SVSVPRAPSI BACU018429/1-914 ASTTTRTVAD TTRAPGTTVR SPAYQNHSTE TPSLAAAVPS SVSVPRAPSI ENSP00000303634/1-963 ASTMTRTVPA TTRAPGTTVH RSTYQNHSTE TPSLTAAVPS SVSVPRAPSI ENSTTRP00000000974/1-945 ASTTTRTVAD TTRAPGTTVH SPGYQNHSTE TPSLAAAVPG SVSVPRAPSI 801 850 bmy_15162T0/1-704 SPSTPRPATS NHSQHYGNES GKMGSTVTAA VIGIIVPMVV IALLCMSGYL ENSBTAP00000050885/1-807 SPSTPSPATS NHSQHYGNED GKMGSTVTAA VIGIIVPME- ---------- BACU018429/1-914 SPSTPRPATS NHSQHYGNES GKMGSTVTAA VIGIIVPMVV IALLCMSGYL ENSP00000303634/1-963 SPSTLSPATS NHSQHYANED SKMGSTVTAA VIGIIVPIVV IALLCMSGYL ENSTTRP00000000974/1-945 NPSTPSPATS NHSQHYGNES GKMGSTVTAA VIGIIVPMVV IALLCMSGYL 851 900 bmy_15162T0/1-704 IWRNWKRKNT KSMNFDNPVY RKTTEEEDED ELHIGRAAQI GHVYPAN--- ENSBTAP00000050885/1-807 -----KSRNT PEKEYAE--- ---TEPEEQG AVNIGRTAQI GHVYPAAISS BACU018429/1-914 IWRNWKRKNT KSMNFDNPVY RKTTEEEDED ELHIGRAAQI GHVYPAAISS ENSP00000303634/1-963 IWRNWKRKNT KSMNFDNPVY RKTTEEEDED ELHIGRTAQI GHVYPAAISS ENSTTRP00000000974/1-945 IWRNWKRKNT KSMNFDNPVY RKTTEEEDED ELHIGRAAQI GHVYPAAISS 901 950 bmy_15162T0/1-704 -DYALWLSII INYLLTYFKS KISSISNLES PQEGLSVVF- --REAFGNLD ENSBTAP00000050885/1-807 FDHPLWAEP- ---------- CLGETRELED PAPALKELFV LPGEPRSQPH BACU018429/1-914 FDHPLWAEP- ---------- CLGETREMED PAPALKELFV LPGEPRSQLH ENSP00000303634/1-963 FDRPLWAEP- ---------- CLGETREPED PAPALKELFV LPGEPRSQLH ENSTTRP00000000974/1-945 FDHPLWAEP- ---------- CLGETREMED PAPALKELFV LPGEPRSQLH 951 1000 bmy_15162T0/1-704 Q-KRDTMDTW VEFTVSSEAH -------- ENSBTAP00000050885/1-807 QLPKNPLSEL PVVKCKRVAL SLEDDGLP BACU018429/1-914 QLPKNPLSEL PVVKCK---- -------- ENSP00000303634/1-963 QLPKNPLSEL PVVKSKRVAL SLEDDGLP ENSTTRP00000000974/1-945 QLPKNPLSEL PVVKCK---- --------