KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:00:37 2014 Check: 00 .. Name: ENSTTRP00000010070/1-347 Len: 597 Check: 5981 Weight: 1.00 Name: ENSBTAP00000050888/1-353 Len: 597 Check: 6462 Weight: 1.00 Name: bmy_13253T0/1-352 Len: 597 Check: 90 Weight: 1.00 Name: BACU008342/1-596 Len: 597 Check: 7819 Weight: 1.00 // 1 50 ENSTTRP00000010070/1-347 ---------- ---------- ---------- --------ME A--------- ENSBTAP00000050888/1-353 ---------- ---------- ---------- --------ME G--------- bmy_13253T0/1-352 ---------- ---------- ---------- --------ME G--------- BACU008342/1-596 MVRVRAVVMA RDDSSGGWLP VGGGGLSQVS VCRVRGARPE GGARQGHYVI 51 100 ENSTTRP00000010070/1-347 ---------- ---------- ---------- ---------- --------AE ENSBTAP00000050888/1-353 ---------- ---------- ---------- ---------- ------AEAE bmy_13253T0/1-352 ---------- ---------- ---------- ---------- ------AEAE BACU008342/1-596 HGERLRDQKT TLECTLRPGL VYNKVNPIFH HWSLGDCKFG LTFQSPAEAD 101 150 ENSTTRP00000010070/1-347 ERE------- ---------- ---------- ----WAA--- VRDLL----- ENSBTAP00000050888/1-353 EQE------- ---------- ---------- ----WAA--V AQDLL----- bmy_13253T0/1-352 ERE------- ---------- ---------- ----WAA--V ARDLL----- BACU008342/1-596 EFQKSLLAAL AALGRGYRRH SLPSDECRIR FGTCWGTVGV AREHLEEQNW 151 200 ENSTTRP00000010070/1-347 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000050888/1-353 ---------- ---------- ---------- ---------- ---------- bmy_13253T0/1-352 ---------- ---------- ---------- ---------- ---------- BACU008342/1-596 FPGQKRGIPR SHVDSDSSSS HSHQETPPTA AAAPIVTVES ASGFGPATPP 201 250 ENSTTRP00000010070/1-347 ---------- ---------- ---------- ALG------- ---------- ENSBTAP00000050888/1-353 ---------- ---------- ---------- ALG------- ---------- bmy_13253T0/1-352 ---------- ---------- ---------- ALG------- ---------- BACU008342/1-596 QRRRSSAQSY PPLLPFTGIP EPSEPLAGTG GLGWGGRGYE DYRRAGPPAP 251 300 ENSTTRP00000010070/1-347 ---------- -----XXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000050888/1-353 ---------- -----YEGCP GAASPGTSCP DFRALCARLA AELATLGALE bmy_13253T0/1-352 ---------- -----YEGFP GAASLGNSCP DFRALCARLA AELATLGALE BACU008342/1-596 LALSTCVVRF AKTGAYESFP GAASLGNSCP DFRALCARLA AELATLGALE 301 350 ENSTTRP00000010070/1-347 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000050888/1-353 REREEGTEAL SAGDDPGAEE EFLRQLAGLL RELHCPDREL CGGDCAASLR bmy_13253T0/1-352 RQREEGTEAL SAGDGPVPEE EFLRQLAGLL RELHCPDREL CGGDCAASLR BACU008342/1-596 RQREEGTEAL SAGDGPVPEE EFLRQLAGLL RELHCPDREL CGGGCAGSLR 351 400 ENSTTRP00000010070/1-347 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXVEG AEEGSGLVEM ENSBTAP00000050888/1-353 EP-DARLRLL RFLCSEVQAA RLLRLRSRLD PNPEPSCGEE AEEGSGMVQE bmy_13253T0/1-352 ES-GARLRLL RFLCSEVQAA RLLRLQSRLD PSPEQSGVEG AEEGSGLVQE BACU008342/1-596 EAXXXXLRLL RFLCSEVQAA RLLRLQSRLD PSPEQSGVEG AEEGSGLVQE 401 450 ENSTTRP00000010070/1-347 LTL---ALGL PRPMPGTPAS QLLRDLHAKI AELLPSLPAG SLKPLLSYPL ENSBTAP00000050888/1-353 LILTLQALGL PRPTRGTPAC QLLQDLHAKI SALLPSLPPE SLQPLLNHPL bmy_13253T0/1-352 MVLTLQVLGL PRPMPGTPAS QLLRDLHAKI AELLPSLPAG SLQPLLSYPL BACU008342/1-596 MVLTLQALGL PRPMPGTPAS QLLRDLHAKI AELLPSLPAG SLQPLLSYPL 451 500 ENSTTRP00000010070/1-347 DAPRWEALES LHQSLRDQYC CRRCLLLKRL DLTTSAFHWS DRAEAQGEAM ENSBTAP00000050888/1-353 DAPRWEALAS LSQSLRDQYG CRRSLLLKRL DLTTSAFHWS DRAEAQGEAM bmy_13253T0/1-352 DAPRWEALES LSQSLRDQYC CRRCLLLKRL DLTTSAFHWS DRAEAQGEAM BACU008342/1-596 DAPRWETLES LSQSLRDQYC CRRCLLLKRL DLTTSAFHWS DRAEAQGEAM 501 550 ENSTTRP00000010070/1-347 KAVLIPIREA LTPESDVSIA HVLAARADLS RLVPATSKTA RRGTCCAIHK ENSBTAP00000050888/1-353 KAVLIPIREA LTSESDISIA HVLAARADLS RLVPATSKTA RQGTCCAINK bmy_13253T0/1-352 KAVLIPIRES LTPESDVSIA HVLAARADLS RLVPATSKTA RRGTCCAIHK BACU008342/1-596 KAVLIPIRES LTPESDVSIA HVLAARADLS RLVPATSKTA RRGTCCAIHK 551 600 ENSTTRP00000010070/1-347 VLMGSVPDRG GRPNELEAPM PSWQSRREDR GGRKAGRQCW GRKKKK- ENSBTAP00000050888/1-353 VLMGSVPDRG GRPNELEAPM PSWQSRREDG GGRKAGRQCW GRKKKKK bmy_13253T0/1-352 VLMGSVPDRG GRPNELEAPM PSWQSRREDR GGQKAGRQCW GRKKKK- BACU008342/1-596 VLMGSVPDRG GRPNELEAPM PSWQSRREDR GGQKAGRQCW GRKKKK-