KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:37 2014 Check: 00 .. Name: ENSP00000362677/1-314 Len: 528 Check: 1718 Weight: 1.00 Name: bmy_04630T0/1-503 Len: 528 Check: 8648 Weight: 1.00 Name: BACU016291/1-217 Len: 528 Check: 5254 Weight: 1.00 Name: ENSBTAP00000050891/1-296 Len: 528 Check: 9195 Weight: 1.00 Name: ENSTTRP00000016484/1-305 Len: 528 Check: 756 Weight: 1.00 // 1 50 ENSP00000362677/1-314 ---------- ---------- ---------- ---------- ---------- bmy_04630T0/1-503 TPQRLRAPSR LPWRPLIHSF PLPLHFVLSR AGRPDQRPPR REPAGAGGRG BACU016291/1-217 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000050891/1-296 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016484/1-305 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000362677/1-314 -MNSGVPATL AVRRVKFFGQ HGGEVNSSAF SPDGQMLLTG SEDGCVYGWE bmy_04630T0/1-503 PMNSRDPGTL AVERVKFFGQ HRGEVNSSAF SPDGQKLLTA SEDGCVYGWD BACU016291/1-217 -MNSRDPGTL AVDRVKFFGR HRGEVNSSAF SPNGQKLLTA AEDGCVYGWD ENSBTAP00000050891/1-296 -MNSRPRGKL AVGRVKFFGR HRGEVNSSAF SPDGQRLLTA SEDGCVYGWE ENSTTRP00000016484/1-305 -MNSRAPGTL AVERVKFFGQ HRGEVNSSAF SPDGQKLLTA SEDGCVYGWE 101 150 ENSP00000362677/1-314 TRSGQLLWRL GGHTGPVKFC RFSPDGHLFA SASCDCTVRL WDVARAKCLR bmy_04630T0/1-503 TQSGRLLWR- ---------- ---------H STSCDCTIRL WDVAEAKCLQ BACU016291/1-217 TQSGRLLWR- ---------- ---------H STSCDCTIRL WDVAEAKCLQ ENSBTAP00000050891/1-296 TQSGRLLWRL RGHKGPVRFC RFSPDGRLFA STSCDRTIRL WDATDAKCLQ ENSTTRP00000016484/1-305 TQSGRLLWT- ----GPVRFC RFSPDGCLFA STSCDCTIRL WDVAEAKCLQ 151 200 ENSP00000362677/1-314 VLK------- ---------- ---------- ---------- -GHQRSVETV bmy_04630T0/1-503 VLQGEWAGWD WEPSSQAWVP FRTLLCPVPP RPCLAAWPVP AGHQRSVETI BACU016291/1-217 ALH------- ---------- ---------- ---------- ---------- ENSBTAP00000050891/1-296 VLK------- ---------- ---------- ---------- -GHQRSVETV ENSTTRP00000016484/1-305 VLQ------- ---------- ---------- ---------- -GHQRSVETI 201 250 ENSP00000362677/1-314 SFSPDSRQLA SGGWDKRVML WDVQ--SGQM LRLLVGHRDS IQSSDFSPTV bmy_04630T0/1-503 SFSPDTKQLA SGGWDKRVML WEVQVGGGAA SEAWDPGMHT IHSGHTFQLG BACU016291/1-217 ---------A SRGTGRRRA- ------HGSC LQ-------- ---------- ENSBTAP00000050891/1-296 SFSHDSKQLA SGGWDKRVML WEVQ--SGQV LRHFVGHRDS VQSSDFAPSS ENSTTRP00000016484/1-305 SFSPDSEQLA SGGWDKRVML WEVQ--SGQV LRHFVGHRD- VPSSDFAPSS 251 300 ENSP00000362677/1-314 NCLATGSWDS TVHIWDLRMV TPAVSHQALE GHSANISCLC YSASG-LL-- bmy_04630T0/1-503 K--ATGSWDS TIRMWDVRAG TPVIFHQELE GHSGNVSCLC YSASGLFVGW BACU016291/1-217 ---ATGSWDS TIRMWDVQAG TPVIFHQELE GHSGNVSCLC YLASGLLL-- ENSBTAP00000050891/1-296 DCLATGSWDS TIRMWDLRAG TPGIFHQELE GHRGNISCLC YSPSG-LL-- ENSTTRP00000016484/1-305 DCLATGSWNS TIRMWDLRAG TPVIFHQELE GHSGNVSCLC YSASG-LL-- 301 350 ENSP00000362677/1-314 ---------- ---------- ----ASGSWD KTIHIWKPTT SSLLIQLKGH bmy_04630T0/1-503 AAWVPGRPLA DYNSLRVTGH FGGRASGSWD KTIHTWKPST GSLLVQLKGH BACU016291/1-217 ---------- ---------- ----ASGSWD KTSHTWKPST GSLLVQLKGH ENSBTAP00000050891/1-296 ---------- ---------- ----ASGSWD KTIHIWKPST RSLLIQLKGH ENSTTRP00000016484/1-305 ---------- ---------- ----VSGSWD KTIHIWKPST GSLPVQLKGH 351 400 ENSP00000362677/1-314 VTWVKSIAFS PDELWLASAG YSRMVKVWDC NTGKCLETLK GV-LDVAHTC bmy_04630T0/1-503 ITWVKSRAFS PDGLQLASTG YSYMLKVWDC NTGKCIETLK CLELLLRQNA BACU016291/1-217 ITGVKSRAFS PDGLQLASTG YSYM------ ---------- GV-LDVAHAC ENSBTAP00000050891/1-296 ITWVKSIAFS PDGQQLASAG YSHMVKVWDC NTGKCTETLK GV-LNVAHAC ENSTTRP00000016484/1-305 ITWVKSRAFS PDGLQVASTG YSHMVKVWDY NTGKSIETLK GV-LDVAHAC 401 450 ENSP00000362677/1-314 AFTPD----- ---------- ---------- ---------- ---------- bmy_04630T0/1-503 KFTANHPELL KQNITTYGSQ DLPPLLLPAQ GAQDQSNRLD RVLPERVQPL BACU016291/1-217 VFTPD----- ---------- ---------- ---------- ---------- ENSBTAP00000050891/1-296 AFMPD----- ---------- ---------- ---------- ---------- ENSTTRP00000016484/1-305 AFTPD----- ---------- ---------- ---------- ---------- 451 500 ENSP00000362677/1-314 ---------- ---------- ---------- ---------- ---------- bmy_04630T0/1-503 LPLLLLGLQV LFVFVEPAAH GTRFLGPQIQ GLVLLALGEG EQGKHEDQGL BACU016291/1-217 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000050891/1-296 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016484/1-305 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000362677/1-314 GKILVSGAAD QTRRQISRTS KSPRDPQT bmy_04630T0/1-503 GATVVAEEAT ESELRCWDVP GGMRA--- BACU016291/1-217 GKLLVSGAAA ---------- -------- ENSBTAP00000050891/1-296 GKLLVSGAVD ---------- -------- ENSTTRP00000016484/1-305 GKLLVSGAAA KFQVHCKSPR AAQTE---