KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:37 2014 Check: 00 .. Name: BACU006574/1-564 Len: 642 Check: 8044 Weight: 1.00 Name: ENSTTRP00000012222/1-593 Len: 642 Check: 7768 Weight: 1.00 Name: ENSBTAP00000050894/1-496 Len: 642 Check: 3919 Weight: 1.00 Name: bmy_09638T0/1-485 Len: 642 Check: 992 Weight: 1.00 Name: ENSP00000424198/1-597 Len: 642 Check: 8276 Weight: 1.00 // 1 50 BACU006574/1-564 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012222/1-593 ---------- ----MEMPPR PP----ACTK QGHQKPLDSK DDNTEKHCPV ENSBTAP00000050894/1-496 ---------- --MSRLWPKT ---------- ---------- ---------- bmy_09638T0/1-485 MIPLRNLRYR KMGSCVVLDV R------CTK QGHQKPLDSK DDNTEKHCPV ENSP00000424198/1-597 ---------- ----MVWLEA RPQILFVCTK QGHQKPLDSK DDNTEKHCPV 51 100 BACU006574/1-564 ------MKKA FKVMNELRSQ NLLCDVTIVA EDMEISAHRV VLAACSPYFH ENSTTRP00000012222/1-593 TVNPWHMKKA FKVMNELRSQ NLLCDVTIVA EDMEISAHRV VLAACSPYFH ENSBTAP00000050894/1-496 ---------- ---------- ---------- ---------- ---------- bmy_09638T0/1-485 TVNPWHMKKA FKVMNELRSQ NLLCDVTIVA EDMEISAHRV VLAACSPYFH ENSP00000424198/1-597 TVNPWHMKKA FKVMNELRSQ NLLCDVTIVA EDMEISAHRV VLAACSPYFH 101 150 BACU006574/1-564 AMFTGEMSES RAKRVRIKEV DGWTLRMLID YVYTAEIQVT EENVQVLLPA ENSTTRP00000012222/1-593 AMFTGEMSES RAKRVRIKEV DGWTLRMLID YVYTAEIQVT EENVQVLLPA ENSBTAP00000050894/1-496 ---------- ---------- --WKF-LLIE WCWLPVVLTF TPCLQVLLPA bmy_09638T0/1-485 AMFTGEMSES RAKRVRIKEV DGWTLRMLID YVYTAEIQVT EEN------- ENSP00000424198/1-597 AMFTGEMSES RAKRVRIKEV DGWTLRMLID YVYTAEIQVT EENVQVLLPA 151 200 BACU006574/1-564 AGLLQLQDVK KTCCEFLESQ LHPVNCLGIR AFADMHACTD LLNKANTYAG ENSTTRP00000012222/1-593 AGLLQLQDVK KTCCEFLESQ LHPVNCLGIR AFADMHACTD LLNKANTYA- ENSBTAP00000050894/1-496 AGLLQLQDVK KTCCEFLESQ LHPVNCLGIR AFADMHACTD LLNKANTYA- bmy_09638T0/1-485 ---------- ---------- ---------- ---------- ---------- ENSP00000424198/1-597 AGLLQLQDVK KTCCEFLESQ LHPVNCLGIR AFADMHACTD LLNKANTYA- 201 250 BACU006574/1-564 KWNKPRLKQH FADVVLSEEF LNLGIEQVCS LISSDKLTIS SEEKVFEAVI ENSTTRP00000012222/1-593 -------EQH FADVVLSEEF LNLGIEQVCS LISSDKLTIS SEEKVFEAVI ENSBTAP00000050894/1-496 -------EQH FADVVLSEEF LNLGIEQVCS LISSDKLTIS SEEKVFEAVI bmy_09638T0/1-485 ---------- ---------- ---------- ---------- ---------- ENSP00000424198/1-597 -------EQH FADVVLSEEF LNLGIEQVCS LISSDKLTIS SEEKVFEAVI 251 300 BACU006574/1-564 AWVNHDKDVR QEFMARLMEH VRLPLLPREY LVQRVEEEAL VKNSSACKDY ENSTTRP00000012222/1-593 AWVNHDKDVR QEFMARLMEH VRLPLLPREY LVQRVEEEAL VKNSSACKDY ENSBTAP00000050894/1-496 AWVNHDKDVR QEFMARLMEH VRLPLLPREY LVQRVEEEAL VKNSSACKDY bmy_09638T0/1-485 ---------- ---------- ---------- -VQRVEEEAL VKNSSACKDY ENSP00000424198/1-597 AWVNHDKDVR QEFMARLMEH VRLPLLPREY LVQRVEEEAL VKNSSACKDY 301 350 BACU006574/1-564 LIEAMKYHLL PTEQRILMKS VRTRLRTPMN LPKLMVVVGG QAPKAIRSVE ENSTTRP00000012222/1-593 LIEAMKYHLL PTEQRILMKS VRTRLRTPMN LPXLMVVVGG QAPKAIRSVE ENSBTAP00000050894/1-496 LIEAMKYHLL PTEQRILMKS IRTRLRTPMN LPKLMVVVGG QAPKAIRSVE bmy_09638T0/1-485 LIEAMKYHLL PTEQRILMKS VRTRLRTPMN LPKLMVVVGG QAPKAIRSVE ENSP00000424198/1-597 LIEAMKYHLL PTEQRILMKS VRTRLRTPMN LPKLMVVVGG QAPKAIRSVE 351 400 BACU006574/1-564 CYDFKEERWH QVAELPSRRC RAGVCAVNGL LYVVGGDDGS CNLASVEYYN ENSTTRP00000012222/1-593 CYDFKEERWH QVAELPSRRC RAXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000050894/1-496 CYDFKEERWH QVAELPSRRC RAGMVYMAGL VFAVGGFNGS LRVRTVDSYD bmy_09638T0/1-485 CYDFKEERWH QVAELPSRRC RAGMVYMAGL VFAVGGFNGS LRVRTVDSYD ENSP00000424198/1-597 CYDFKEERWH QVAELPSRRC RAGMVYMAGL VFAVGGFNGS LRVRTVDSYD 401 450 BACU006574/1-564 PTTDKWTVVS ---------- SCMSTGRSYA ANGRAASAP- ---------F ENSTTRP00000012222/1-593 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXX- ---------L ENSBTAP00000050894/1-496 PVKDQWTSVA NMRDRRSTLG AAVLNGLLYA VGGFDGSTG- ---------L bmy_09638T0/1-485 PVKDQWTSVA NMRDRRSTLG AAVLNGLLYA VGGFDGSTGN FLLSFLHCWL ENSP00000424198/1-597 PVKDQWTSVA NMRDRRSTLG AAVLNGLLYA VGGFDGSTG- ---------L 451 500 BACU006574/1-564 ARVTRCRQLR RPI--TAPGR RGGGPSKPIT AGGTARAAEP SEAREETAAD ENSTTRP00000012222/1-593 SSVEAYNIKS NEWFHVAPMN TRRSSVGVAV VGGLLYAVGG YDGASRQCLS ENSBTAP00000050894/1-496 SSVEAYNIKS NEWFHVAPMN TRRSSVGVGV VGGLLYAVGG YDGASRQCLS bmy_09638T0/1-485 SSVEAYNIKS NEWFHVAPMN TRRSSVGVAV VGGLLYAVGG YDGASRQCLS ENSP00000424198/1-597 SSVEAYNIKS NEWFHVAPMN TRRSSVGVGV VGGLLYAVGG YDGASRQCLS 501 550 BACU006574/1-564 TAVCRINQKR GKINGNVLKY FSLITFAPFG MEAEYAHPLE TLILGTGFFI ENSTTRP00000012222/1-593 TVECY----- -SATANEWTY IAEMSTRRSG AGVGV---LN NLLYAVGGHD ENSBTAP00000050894/1-496 TVECY----- -SATANEWTY IAEMSTRRSG AGVGV---LN NLLYAVGGHD bmy_09638T0/1-485 TVECY----- -SATANEWTY IAEMSTRRSG AGVGV---LN NLLYAVGGHD ENSP00000424198/1-597 TVECY----- -NATTNEWTY IAEMSTRRSG AGVGV---LN NLLYAVGGHD 551 600 BACU006574/1-564 GIMLLCDHVI LLWAWVTIRL IETIDVHSGY DIPLNPLNLI PFYAGSRHHD ENSTTRP00000012222/1-593 GPLVRKSVEV YDPATNTWRQ VADMNM-CRR NAGVCAVNGL LYVVGG-DDG ENSBTAP00000050894/1-496 GPLVRKSVEV YDPATNTWRQ VADMNM-CRR NAGVCAVNGL LYVVGG-DDG bmy_09638T0/1-485 GPLVRKSVEV YDPATNTWRQ VADMNM-CRR NAGVCAVNGL LYVVGG-DDG ENSP00000424198/1-597 GPLVRKSVEV YDPTTNAWRQ VADMNM-CRR NAGVCAVNGL LYVVGG-DDG 601 650 BACU006574/1-564 FHHMNFIGNY ASTFTWWDKL FGTDSQFTAY VEKMKKVEKK TE ENSTTRP00000012222/1-593 SCNLASVEYY NPTTDKWTVV SSCMSTGRSY AG-VTVIDKP L- ENSBTAP00000050894/1-496 SCNLASVEYY NPTTDKWTVV SSCMSTGRSY AG-VTVIDKP L- bmy_09638T0/1-485 SCNLASVEYY NPTTDKWTVV SSCMSTGRSY AG-VTVIDKP L- ENSP00000424198/1-597 SCNLASVEYY NPTTDKWTVV SSCMSTGRSY AG-VTVIDKP L-