KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:00:38 2014 Check: 00 .. Name: ENSBTAP00000050917/1-771 Len: 850 Check: 5577 Weight: 1.00 Name: ENSTTRP00000015502/1-780 Len: 850 Check: 5802 Weight: 1.00 Name: bmy_12793T0/1-569 Len: 850 Check: 2161 Weight: 1.00 Name: BACU013170/1-850 Len: 850 Check: 8993 Weight: 1.00 // 1 50 ENSBTAP00000050917/1-771 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015502/1-780 ---------- ---------- ---------- ---------- ---------- bmy_12793T0/1-569 ---------- ---------- ---------- ---------- ---------- BACU013170/1-850 MASGPGRGAE DSLCSGDGRL ARVCVVALPA LLFLLSSPML DFPYPANYFK 51 100 ENSBTAP00000050917/1-771 ---------- ---------- --------VE SRDSLNSIAL KFDTTPNELV ENSTTRP00000015502/1-780 ---------- -----MSFQK PKGTTEYTVE SRDSLNSIAL KFDTTPNELV bmy_12793T0/1-569 ---------- -----MSFQK PKGTTEYTVE SRDSLNSIAL KFDTTPNELV BACU013170/1-850 DTGQKKTLDK KDGRRMSFQK PKGTTEYTVE SRDSLNSIAL KFDTTPNELV 101 150 ENSBTAP00000050917/1-771 QLNKLFSRAV VTGQVLYVPD PEYVSSVESS PSLSPISPLS PTSSEAELEK ENSTTRP00000015502/1-780 QLNKLFSRAV VTGQVLYVPD PEYVSSVESS PSLSPISPLS PTSSEAELDK bmy_12793T0/1-569 QLNKLFCRAV VTGQVLYVPD PEYVSSVESS PSLSPISPLS PTSSEAELDK BACU013170/1-850 QLNKLFSRAV VTGQVLYVPD PEYVSSVESS PSLSPISPLS PTSSEAELDK 151 200 ENSBTAP00000050917/1-771 TTTPDVVHPK EPTPSSAFTA VRPVRVVSST SEEEEAFTEK FLKINCRYIT ENSTTRP00000015502/1-780 TTNPDVVHPK EETLSSAFTG IRPARVVSST SEEEEAFTEK FLKINCRYIT bmy_12793T0/1-569 TTNPDIVHPK EETLSSAFTG IRPARVVSST SEEEEAFTEK FLKINCRYIT BACU013170/1-850 TTTPDVVHMK EETLSSAFTG IRPARVVSST SEEEEAFTEK FLKINCRYIT 201 250 ENSBTAP00000050917/1-771 SSKGTVSGVL LVTPNNIMFD PHKTDPLVQE NGCEEYGIMC PMEEVMSAAM ENSTTRP00000015502/1-780 SGKGTVSGVL LVTPNNIMFD PHKTDPLVQE NGCEEYGIMC PMEEVMSAAM bmy_12793T0/1-569 SGKGTVSGVL LVTPNNIMFD PHKTDPLVQE NGCEEYGIMC PMEEVMSAAM BACU013170/1-850 SGKGTVSGVL LVTPNNIMFD PHKTDPLVQE NGCEEYGIMC PMEEVMSAAM 251 300 ENSBTAP00000050917/1-771 YKEILDSKIK ESLPIEIDQL SGRDFCHLKK VTRSNTDELD SRIRDAANDS ENSTTRP00000015502/1-780 YKEIFDSKIK ESLPIEIDQL SGKDFCHLKK MTRSNTDEID SRIRDAGNDS bmy_12793T0/1-569 YKEIFDSKIK ESLPIEIDQL SGRDFCHLKK MTRSNTDEID SRIRDAGNDS BACU013170/1-850 YKEIFDSKIK ESLPIEIDQL SGRDFCHLKK MTRTNTDEID SRIRDAGNDS 301 350 ENSBTAP00000050917/1-771 ASTAPRSTEE SLSEDVFTES ELSPVREELI SLDELRHDKS SGASSESVQT ENSTTRP00000015502/1-780 ASTAPRSTEE SLSEDVFTES ELSPIREELI SSDELRQDKS SGASSESVQT bmy_12793T0/1-569 ASTAPRSTEE SLSEDVFTES ELSPIREELI SSDELRQDKS SGASSESVQT BACU013170/1-850 ASTAPRSTEE SLSEDVFTES ELSPIREELV SSDELRQDKS SGASSESVQT 351 400 ENSBTAP00000050917/1-771 ITQSGVECLA VISEAASTPD HLKSGSGHTA NEVGTLSLKT GLNNLEMPTK ENSTTRP00000015502/1-780 ISQSGVECLT VITEAASTPD HLKSDSGHTT NEVGTLSLKT DLNNLEMATK bmy_12793T0/1-569 VSQSGVECLT VXTEAASTPD HLKSDSGHTT NEVGTLSLKT DLNNLEIATK BACU013170/1-850 VSQSGVECLT VITEAASTPD HLKSDSGHTT SEVGTLSLKT DLNNLEMATK 401 450 ENSBTAP00000050917/1-771 EGDQAADNLQ KISGLKEQST GIKKD-NQDF PLDENSLHQE EVEKESMPCG ENSTTRP00000015502/1-780 EGDQTTDNLQ EISGPKEQST GIKGNADQDF LLNENSLHHE EGEKESMPCG bmy_12793T0/1-569 EGDQTTDNLQ EISGPKEQST GIKGNADQDF LLNENSLHHE EGEKEGMPCE BACU013170/1-850 EGDQTTDNLQ EISGPKEQST GIKGNADQDF LLNENSLHHE EGEKEGMPCE 451 500 ENSBTAP00000050917/1-771 EAIELKQKQV VDKGKQGREQ NQDSETEVEE LRKLWKSHSM QQTKQQRETM ENSTTRP00000015502/1-780 EAIEFKHKPI VNKGKQGKEQ NQDSETEVEE LRKLWKTHTM QQTKQQRENI bmy_12793T0/1-569 EAIEFKQKPI VNKGKQRKEX NQDSETEVEE LRELWKTHTM QQTKQQRENI BACU013170/1-850 EAIEFKQKPV VNKGKQRKEQ NQDSETEVEE LRKLWKTHTM QQTKQQRENI 501 550 ENSBTAP00000050917/1-771 QQVSQKEIKH KIATADIEGS ALLKEKRRHR LHKFLCLRVR KPMRKTFVSQ ENSTTRP00000015502/1-780 QQVSQKEIKH KIATTNIEGS ALLKEKRRHR LHKFLCLRVG KPMRKTFVSQ bmy_12793T0/1-569 QQVSQKEIKH KIATTNIEGS ALLKEKRRHR LHKFLCLRVG KPMRKTFVSQ BACU013170/1-850 QQVSQKEIKH KIATTNIEGS ALLKEKRRHR LYKFLCLRVG KPMRKTFVSQ 551 600 ENSBTAP00000050917/1-771 ASATMQQYAQ RDKKHEYWFA VPQERTDHLY AFFIQWSPET YAEDTGEYTK ENSTTRP00000015502/1-780 ASATMQQYAQ RDKKHEYWFA VPQERTDHLY -FFIQWSPEI YAEDTGEYTR bmy_12793T0/1-569 ASATMQQYAQ RDKKHEYWFA VPQERTDHLY AFFIQWSPEI YAEDTGEYTR BACU013170/1-850 ASATMQQYAQ RDKKHEYWFA VPQERTDHLY AFFIQWSPEI YAEDTGEYTR 601 650 ENSBTAP00000050917/1-771 EPGFIVVKKI EESETNEDST NEAAAREWEV VSVAEYHRRI DALNTEELRT ENSTTRP00000015502/1-780 EPGFIVVKKI EESETSEDST NEAAAREWEX XXXXXXXRRI DALNTEELRT bmy_12793T0/1-569 EPGFIVVKKI EESETNEDST NEAAAREWEV ---------- ---------- BACU013170/1-850 EPGFIVVKKI EESETNEDST NEAAAREWEV VSVAEYHRRI DALNTEELRT 651 700 ENSBTAP00000050917/1-771 LCRRLQITTR EDINSKQSTP VKADLESESF RPNLSDPSHL LLPDQIIKLT ENSTTRP00000015502/1-780 LCRRLQITTR EDINSKQVTP VKADLESESF RPNLSDPSEL LLPDQIEKLT bmy_12793T0/1-569 ---------- ---------- ---------- ---------- ---------- BACU013170/1-850 LCRRLQITTR EDINSKQVTP VKADLESESF RPNLSDPSEL LLPDQIEKLT 701 750 ENSBTAP00000050917/1-771 KHLPPRTIGY PWTLVYGTRK HGTSLKTLYR TMTGLDTPVL MVIKDSDWQV ENSTTRP00000015502/1-780 KHLPPRTIGY PWTLVYGTGK HGTSLKTLYR TMTGLDTPVL MVIKDSDGQV bmy_12793T0/1-569 ---------- ---------- ---------- ---------- ---------- BACU013170/1-850 KHLPPRTIGY PWTLVYGTGK HGTSLKTLYR TMTGLDTPVL MVIKDSDGQV 751 800 ENSBTAP00000050917/1-771 FGAFASQPFK VSDGFYGNGE TFVFTFCPEF EVFKWTGDNM FFIKGDMDSL ENSTTRP00000015502/1-780 FGALASEPFK VSDGFYGTGE TFVFTFCPQF EVFKWTGDNM FFIKGDMDSL bmy_12793T0/1-569 ---------- ---------- ---------- ---------- ---RGKM--- BACU013170/1-850 FGALASEPLK VSDGFYGTGE TFVFTFCPEF EVFKWTGDNM FFIKGDMDSL 801 850 ENSBTAP00000050917/1-771 AFGGGGGEFA LWLDGDLYHG RSHSCKTFGN HTLSKKEDFC IQDIEIWAFK ENSTTRP00000015502/1-780 AFGGGGGEFV LL--DDLY-- RSHSCKTFGN HTLSKKEDFF IQDIEIWAFE bmy_12793T0/1-569 ---------- ---------- ---------- ---------- ---------- BACU013170/1-850 AFGGGGGEFA LWLDGDLYHG RSHSCKTFGN HTLSKKEDFF IQDIEIWAFE