KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 18:00:39 2014  Check: 00 ..

 Name: ENSP00000356121/1-181     Len:    312  Check:  6538  Weight:  1.00
 Name: ENSBTAP00000050956/1-183  Len:    312  Check:  4886  Weight:  1.00
 Name: bmy_02387T0/1-312         Len:    312  Check:  2634  Weight:  1.00
 Name: ENSTTRP00000013260/1-183  Len:    312  Check:  3589  Weight:  1.00
 Name: BACU020156/1-183          Len:    312  Check:  5439  Weight:  1.00

//


                          1                                                   50
ENSP00000356121/1-181     ---------- ---------- ---------- ---------- ---------- 
ENSBTAP00000050956/1-183  ---------- ---------- ---------- ---------- ---------- 
bmy_02387T0/1-312         MASVDPCYRD KNVTTDTVFH CVGSVLPLPL RLCYIIAVAS PSSPLLAKQV 
ENSTTRP00000013260/1-183  ---------- ---------- ---------- ---------- ---------- 
BACU020156/1-183          ---------- ---------- ---------- ---------- ---------- 


                          51                                                 100
ENSP00000356121/1-181     ---------- ---------- ---------- MVDVKCLSDC KLQNQLEKLG 
ENSBTAP00000050956/1-183  ---------- ---------- ---------- MVEVKCLSDD ELQNELHKLG 
bmy_02387T0/1-312         KLDSQVSFCT CLCVGGERFH CQKRDQTFIT IVDVKCLSDD ELQNELDKLG 
ENSTTRP00000013260/1-183  ---------- ---------- ---------- MVDVKCLSDD ELQNELDKFG 
BACU020156/1-183          ---------- ---------- ---------- MVDVKCLSDD ELQNKLDKLG 


                          101                                                150
ENSP00000356121/1-181     FSPGPILPST RKLYEKKLVQ LLVSPPCAPP VMNGPRELDG AQDSDDSE-- 
ENSBTAP00000050956/1-183  FPPGPILPST RKVYEKKLVQ LLVSTPCAPP KKNGPGELNR AQDNDDSE-- 
bmy_02387T0/1-312         FSPGPILPST RKVYEKKLVQ LLVSTPCASP EMNRPRELDR AQDYDDSEGT 
ENSTTRP00000013260/1-183  FSPGPILSST RKVKEKKLVQ LLVSTPCASP EMNGPRELDR AQDYDDSE-- 
BACU020156/1-183          FSPGPILPST RKVYEKKLVQ LLVSTPCASP EMNRPRERDR AQDYDGSE-- 


                          151                                                200
ENSP00000356121/1-181     ---------- ELNI------ ---------- --------IL QGNIILSTEK 
ENSBTAP00000050956/1-183  ---------- EFNATI---- ---------- --------IL KRNITPSSEK 
bmy_02387T0/1-312         VRSCTVDSSC ALTHTLSGMI YAALNVEPSF EIQEQQEEIV KPNCDYNDSK 
ENSTTRP00000013260/1-183  ---------- ELNATI---- ---------- --------IS KGNIIFSSEK 
BACU020156/1-183          ---------- EFNVTI---- ---------- --------IL KGNIIFSSEK 


                          201                                                250
ENSP00000356121/1-181     S--KKLK--- ---------- KWPEASTTKR KAVDTYCLDY KPSKGRRWAA 
ENSBTAP00000050956/1-183  S--KGPK--- ---------- NRCKTSTSKP KAVEIFCSDS KRTEGRRCAA 
bmy_02387T0/1-312         MIIKGCNCQF AKSSFCLCAY ARPKASTSKP KALEGFCLDS KRSEGTRCAA 
ENSTTRP00000013260/1-183  N--KGPK--- ---------- KRPKAPTSKP KSLEGFCLDS KRSEGRRCAA 
BACU020156/1-183          N--KGPK--- ---------- KRPKASTSKP KALEGFCLDS KRSEGRRCAA 


                          251                                                300
ENSP00000356121/1-181     RAPSTRITYG TITKERDYCA EDQTIESWRE EGFPVGLKLA VLGIFIIVVF 
ENSBTAP00000050956/1-183  RTSNIRCKAL RNLKEKACCR ANRRAGDSGL ETFPMGLTLA VFGILVIVIF 
bmy_02387T0/1-312         GASNIRFKSW NNIRXNACCI VNRRAGSRNI ETFPVGLKLA VFGIFIIVIF 
ENSTTRP00000013260/1-183  RASNVRFKAW NNIRENACCI VNRSAGSRNI ETFPAGLKLA VFGIFITVIF 
BACU020156/1-183          GASNIRFKSW NNIRENACCI VNRRAGSRNI ETSPVGLKLA VFGIFNIVIF 


                          301                                                350
ENSP00000356121/1-181     VYLTVENKSL FG 
ENSBTAP00000050956/1-183  VYITMESKSL FG 
bmy_02387T0/1-312         VYITVERKPL FG 
ENSTTRP00000013260/1-183  VYITVEGKPL FG 
BACU020156/1-183          VYITVERKPL FG