KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:00:41 2014 Check: 00 .. Name: bmy_11829T0/1-449 Len: 532 Check: 6365 Weight: 1.00 Name: ENSTTRP00000007526/1-524 Len: 532 Check: 482 Weight: 1.00 Name: BACU015581/1-503 Len: 532 Check: 6905 Weight: 1.00 Name: ENSBTAP00000051020/1-524 Len: 532 Check: 2591 Weight: 1.00 // 1 50 bmy_11829T0/1-449 ---------- ---------- -MGCSCSSNP ED-DWMENID VCENCHYPIV ENSTTRP00000007526/1-524 LGGRSSCEDP GCPRDEERAP RMGCVKSRFL RDGGKVSKTE PDTSPHSALY BACU015581/1-503 ---------- ---------- -MGCVKSKFL RDGGKVSKTE PNTSPHNPLY ENSBTAP00000051020/1-524 LGGRSSCEDP GCPPEEERAP RMGCVKSKFL RNGGKVSKTE PNTNPHSPLY 51 100 bmy_11829T0/1-449 PLDGKAMLSI WNGSEVRDPL VTYE-GSNPP ASPLQDNLVI ALHSYEPSHD ENSTTRP00000007526/1-524 VPDPTSLGKR WPDSSNGNPP GSTEAGS--- ----EEIIVV ALYDYEAIHH BACU015581/1-503 VPDPTSSGKR WPDSSNGNPP GSTE-GS--- ----EEITVV ALYDYEAIHH ENSBTAP00000051020/1-524 VPDPTSSGKR WPDSSNGNPP GSTE-GS--- ----EDIIVV ALYDYDAIHH 101 150 bmy_11829T0/1-449 GDLGFEKGEQ LRILEQNGEW WKAQSVTTGQ EGYIPFNFVA RANSLEPEPW ENSTTRP00000007526/1-524 EDLSFQKGDE MVVLEXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXW BACU015581/1-503 EDLSFQTGDQ MVVLEESGEW WRARSLATRK EGYIPSNYVA RVNSLETEEW ENSBTAP00000051020/1-524 EDLSFQKGDQ MVVLEESGEW WRARSLATRK EGYIPSNYVA RVNSLETEEW 151 200 bmy_11829T0/1-449 FFKTLSRKDA ERQLLAPGNT HGSFLIRESE STTGSFSLSI RDFDQTQGEV ENSTTRP00000007526/1-524 FFKGISRKDA ERQLLAPGNV LGSFMMRDSE TTKGSYSLSV RDYDPQHGDT BACU015581/1-503 FFKGISRKDA ERQLLAPGNV LGSFMIRDSE TTKGSYSLSV RDYDPQHRDT ENSBTAP00000051020/1-524 FFKGISRKDA ERQLLAPGNV LGSFMIRDSE TTKGSYSLSV RDYDPQHRDT 201 250 bmy_11829T0/1-449 VKHYKIRNLD KGGFYISPRI TFPGLHELVR HYMNSSDGLC TRLSRPCQTQ ENSTTRP00000007526/1-524 VKHYKIRTLD NGGFYISPRS TFGSLQELVA HYKKGSDGLC QKLTVPCMS- BACU015581/1-503 VKHYKIRTLD NGGFYISPRS TFSSLQELVA HYKKGSDGLC QKLTVPCMSS ENSBTAP00000051020/1-524 VKHYKIRTLD NGGFYISPRS TFGSLQELVA HYKKASDGLC QKLTVPCMSS 251 300 bmy_11829T0/1-449 KPQKPWWEDE WEVPRETLKL VERLGAGQFG EVWM------ ---------- ENSTTRP00000007526/1-524 KPQXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXTYNEH TKVAVKTMKP BACU015581/1-503 KPQKPWEKDA WEIPRESLKL EKKLGAGQFG EVWMATYNKH TKVAVKTMKP ENSBTAP00000051020/1-524 KPQKPWEKDA WEIPRESLKM EKKLGAGQFG EVWMATYNKH TKVAVKTMKP 301 350 bmy_11829T0/1-449 ---------- ---------- ---------- ---------- ----GSLVDF ENSTTRP00000007526/1-524 GSMSVDAFLA EANLMKTLQH DKLVKLHAVV TEEPIYIITE FMAKGSLLDF BACU015581/1-503 GSMSVEAFLA EANVMKTLQH DKLVKLHAVV TEEPIYIITE FMAKGSLLDF ENSBTAP00000051020/1-524 GSMSVEAFLA EANLMKTLQH DKLVKLHAVV TEEPIYIITE FMAKGSLLDF 351 400 bmy_11829T0/1-449 LKTSAGIKLT INKLLDMAAQ IAEGMAFIEE RNYIHRDLRA ANILVSDTLS ENSTTRP00000007526/1-524 LKSEEGSKQP LPRLIDFSAQ IAEGMAFIEQ RNYIHRDLRA ANILVSASLV BACU015581/1-503 LKSEEGSKQP LPKLIDFSAQ IAEGMAFIEQ RNYIHRDLRA ANILVSVSLV ENSBTAP00000051020/1-524 LKSEEGSRQP LPKLIDFSAQ IAEGMAFIER RNYIHRDLRA ANILVSASLV 401 450 bmy_11829T0/1-449 CKIADFGLAR LIEDNEYTAR EGAKFPIKWT APEAINYGTF TIKSDVWSFG ENSTTRP00000007526/1-524 CKIADFGLAR IIEDNEYTAR EGAKFPIKWT APEAINFGSF TIKSDVWSFG BACU015581/1-503 CKIADFGLAR IIEDNEYTAR EGAKFPIKWT APEAINFGSF TIKSDVWSFG ENSBTAP00000051020/1-524 CKIADFGLAR VIEDNEYTAR EGAKFPIKWT APEAINFGSF TIKSDVWSFG 451 500 bmy_11829T0/1-449 ILLTEIVTHG RIPYPGMTNP EVIQNLEQGY RMVRPDNCPD ELYHLMMLCW ENSTTRP00000007526/1-524 ILLMEIVTYG RIPYPGMSNP EVIRALERGY RMPRPEHCPE ELYNIMTRCW BACU015581/1-503 VLLMEIVTYG RIPYPGMSNP EVIRALERGY RMPRPEHCPE ELYNIMTRCW ENSBTAP00000051020/1-524 ILLMEIVTYG RIPYPGMSNP EVIRALERGY RMPRPDNCPE ELYNIMTRCW 501 550 bmy_11829T0/1-449 KELPEDRPTF DYLRSVLEDF FTATEGQYQP QP ENSTTRP00000007526/1-524 KNHPEERPTF EYIQSVLDDF YTATEGQYQQ QP BACU015581/1-503 KNRPEERPTF EYIQSVLDDF YTATESQYQQ QP ENSBTAP00000051020/1-524 KNRPEERPTF EYIQSVLDDF YTATESQYQQ QP