KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:41 2014 Check: 00 .. Name: ENSP00000314543/1-343 Len: 350 Check: 1797 Weight: 1.00 Name: ENSBTAP00000051023/1-340 Len: 350 Check: 459 Weight: 1.00 Name: ENSTTRP00000010049/1-272 Len: 350 Check: 527 Weight: 1.00 Name: bmy_18990T0/1-346 Len: 350 Check: 979 Weight: 1.00 Name: BACU011856/1-347 Len: 350 Check: 170 Weight: 1.00 // 1 50 ENSP00000314543/1-343 MPRGQKSKLR AREKRHQARC ENQDLGATQA TV------AE GESPSPAYLL ENSBTAP00000051023/1-340 MPRGQKSKLR AREKRRQART ETQGLEVAKA TG----AAAA GKPHSPV--- ENSTTRP00000010049/1-272 ---------- ---------- ---------- ---------- ---------- bmy_18990T0/1-346 MPRGQKSKLR AREKRRQAHA ETQGLEDAQA TG-AAAAAAA GEPPSSVYPL BACU011856/1-347 MPRGQKSKLR AREKRRQARA ETQGLEDAQA TGAAAAAAAA GESPSSVYPL 51 100 ENSP00000314543/1-343 FGDRPQNLPA AETPSIPEAL QGAPSTTNAI APVSCS-SNE GASSQDEKSL ENSBTAP00000051023/1-340 FGDRPENLPA AGTPSTPEAR EG---ATGAT AASSGTNSAE NINSPKAESA ENSTTRP00000010049/1-272 ---------- ---------- --------AN AAVSCTNSDE GTNSQKKESS bmy_18990T0/1-346 FEDRPQNMPA AGTSSTPEGP QG---TTNAS AAVSCTNSDE GTNSQKKESS BACU011856/1-347 FEDRPQNMPA AGTSSTPEEP QG---TTNAS AAVSCTNSDE GTNSQKKESS 101 150 ENSP00000314543/1-343 GSSREAEGWK EDPLNKKVVS LVHFLLQKYE TKEPITKGDM IKFVIRKDKC ENSBTAP00000051023/1-340 SFPRGAESSL SEILSKKVVL LVQFLLQKYQ KREPIKKADM LKFVIKQYKN ENSTTRP00000010049/1-272 KSSKGIEDLR RDPLHMKVAL LVHYLLHKYQ KKEPITKSDM LKFVIKKYKY bmy_18990T0/1-346 KSSKGTEDSR RDPLHKKVVL LVQFLLQKYQ KKEPITKADM LKFVIKKYKC BACU011856/1-347 KSSKGTEDSR RDPLHKKMVL LVQFLLQKYQ KKEPITKADM LKFVIKKYKC 151 200 ENSP00000314543/1-343 HFNEILKRAS EHMELALGVD LKEVDPIRHY YAFFSKLDLT YDETTSDEEK ENSBTAP00000051023/1-340 HFNEILKRAS DHMELAFGVD LKEVDPTRHC YTLVNKLDLS YDSALNEYEH ENSTTRP00000010049/1-272 RFNEILKRAS EHMELAFGLD LKEVDPTRHC YALVSKLDLT SNGTMNEEEN bmy_18990T0/1-346 HFNEILKRAS EHMELAFGLD LKEVDPTRHC YALVSKLDLT FNGTMNEEEN BACU011856/1-347 HFNEILKRAS EHMELAFGLD LKEVDPTRHC YALVSKLDLT FNGTMNEEDN 201 250 ENSP00000314543/1-343 IPKTGLLMIA LGVIFLNGNR APEEAVWEIM NMMGVYADRK HFLYGDPRKV ENSBTAP00000051023/1-340 MPKTGILMIV LGVIFMRGNC APEEAIWEVL NMMGIYAERK HFIYGDPKKV ENSTTRP00000010049/1-272 PPKTGLLMIV LGVIFINGNC ATEEEIWEVL NMMGVHAERK HFIYGDPKKV bmy_18990T0/1-346 MPKTGLLMIV LGVIFMKGNC APEXEIWEVL NMMGVHAERK HFIYGDPKKV BACU011856/1-347 MPKTRLLMIV LGVISMKGNC APEEEIWGVL NMMGVHAERK HFIYGDPKKV 251 300 ENSP00000314543/1-343 MTKDLVQLKY LEYQQVPNSD PPRYEFLWGP RAHAETSKMK VLEFVAKIHD ENSBTAP00000051023/1-340 LTEDLVQLKY LEYRQVANSE PPCYEFLWGP RAHAETSKMK VLEFLAKVHD ENSTTRP00000010049/1-272 ITEDLVQLKY LEYRQVANSD PPRYEFLWGP RAHVETSKMK VLEFLAKIYD bmy_18990T0/1-346 ITEDLVQLKY LEYRQVANSD PPRYEFLWGP RAHVETSKMK ILEFLAKVYD BACU011856/1-347 ITEDLVQLKY LEYRQVANSD PPRYEFLWGP RAHAETSKMK ILEFLAKVYD 301 350 ENSP00000314543/1-343 TVPSAFPSCY EEALRDEEQR TQARAAARAH TAAMANARSR TTSSSFSHAK ENSBTAP00000051023/1-340 TVPTAFPSWY QEALRDEEER ARARAAARAR TAALASARSR ARASTSSQAK ENSTTRP00000010049/1-272 TVPSAFPFWY EEALRDEEER AQARMAARAR AAAMASARSR ATASNFSQAK bmy_18990T0/1-346 TVPSAFPSWY EEALRDEEER AQARMAARAR TAAMASARSR ATASNFSQAQ BACU011856/1-347 TVPSAFPSWY EEALRDEEER AQARMAARAR TAAMASARSR ATASNFSQAK