KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:43 2014 Check: 00 .. Name: ENSTTRP00000013328/1-330 Len: 352 Check: 9261 Weight: 1.00 Name: bmy_00680T0/1-198 Len: 352 Check: 9521 Weight: 1.00 Name: BACU005167/1-118 Len: 352 Check: 9868 Weight: 1.00 Name: ENSP00000341680/1-351 Len: 352 Check: 8368 Weight: 1.00 Name: ENSBTAP00000051067/1-324 Len: 352 Check: 10 Weight: 1.00 // 1 50 ENSTTRP00000013328/1-330 MLETLRERLL SVQQDFTSGL KTLSDRSREA KVKNKPRTVP YLPKCSAGLE bmy_00680T0/1-198 ---------- ---------- ---------- ---------- ---------- BACU005167/1-118 ---------- ---------- ---------- ---------- ---------- ENSP00000341680/1-351 MLETLRERLL SVQQDFTSGL KTLSDKSREA KVKSKPRTVP FLPKYSAGLE ENSBTAP00000051067/1-324 ---------- ---------L KTLSDKSREA KAKNKPRTVP CLPKYSAGLE 51 100 ENSTTRP00000013328/1-330 LLSRYEDTWA ALHRRAQECA SAGELVDSEV VVLSAHWEKK QASLIELQQQ bmy_00680T0/1-198 ---------- ---------- ---------- ---------- ---------- BACU005167/1-118 ---------- ---------- ---------- ---------- ---------- ENSP00000341680/1-351 LLSRYEDTWA ALHRRAKDCA SAGELVDSEV VMLSAHWEKK KTSLVELQEQ ENSBTAP00000051067/1-324 LLSRYEDTWA ALHRRAKECA SAGERVDSEV VMLSAHWEKK QASLRDLQQQ 101 150 ENSTTRP00000013328/1-330 LRQLPGLQAD LESLTASLXX XXXXXXXXXX XXXXXXXXXX XXXXXXXKHM bmy_00680T0/1-198 ---------- -------MRA CESVFVPIPV SVLFQTLPDP NYSVSLA--- BACU005167/1-118 ---------- ---------- ---------- ---------- ---------- ENSP00000341680/1-351 LQQLPALIAD LESMTANLTH LEASFEEVEN NLLHLEDLCG QCELERCKHM ENSBTAP00000051067/1-324 LQQLPGLIAD LESLTASLTH LEASFEEVEN HLLNLEDLCG QCELERHKHM 151 200 ENSTTRP00000013328/1-330 QS-QLENYKK NK-------- -ELDAEHTQK VLDMEQTQQM KLRERQKFFE bmy_00680T0/1-198 ---------- ---------- -ELDAEHTQK VLDMEQSQQM KLRERQKFFE BACU005167/1-118 ---------- ---------- ---------- ---------- ---------- ENSP00000341680/1-351 QSQQLENYKK NKRKELETFK AELDAEHAQK VLEMEHTQQM KLKERQKFFE ENSBTAP00000051067/1-324 QSQQLENYKK NKRKELETFK AELDAEHSQK VLEMEQTQQL KLKERQKFFE 201 250 ENSTTRP00000013328/1-330 EAFQQDMEQY LSTGYLQTAE RR-EPMGSMS SMEVNVDLLE QMDLVDISDQ bmy_00680T0/1-198 EAFQQDMEQY LSTGCLQTAE RR----GNMS SMDVNVDVLE HMDLVDASDQ BACU005167/1-118 ---------- ---------- -----MGSLS SMEVNVDALE QMDLVDICDQ ENSP00000341680/1-351 EAFQQDMEQY LSTGYLQIAE RR-EPIGSMS SMEVNVDMLE QMDLMDISDQ ENSBTAP00000051067/1-324 EAFQQDMEQY LSTGYLQIAE RRGKPMGSMS SMEVNVDMLE QMDLMDISDQ 251 300 ENSTTRP00000013328/1-330 EALDVFLNSG GEGSTVLSPV SGPEASPGQD EVTLQVPDAS --RATRPSSA bmy_00680T0/1-198 EALDVFLNSG GEDDTVLPPV SGPEASPGQD AVTLQVPNPS RSRATWPSSS BACU005167/1-118 EALDVFLNSG GEDDTVLPPA SGPEASPGQD AVTLQVPNPS RSRATRPSSS ENSP00000341680/1-351 EALDVFLNSG GEENTVLSPA LGPESSTCQN EITLQVPNPS ELRAKPPSSS ENSBTAP00000051067/1-324 EALDVFLNSG GEENTLLSPI SGPEASPGQD AVTLQVPTPS QAPATPPSSS 301 350 ENSTTRP00000013328/1-330 APCTDPAAQD PSEVGESPVV QSDEEGVEVD TALATLHTD- --------DS bmy_00680T0/1-198 SACTDPAAQD PSEGGESPVV QLDEEGVEVD TALATLHTD- --------DS BACU005167/1-118 LACTDPAAQD PSEGGESPVV QSDEEGVEVD TALATLHTD- --------DS ENSP00000341680/1-351 STCTDSATRD ISEGGESPVV QSDEEEVQVD TALATSHTDR EATPDGGEDS ENSBTAP00000051067/1-324 SPGTDPASRD PSEGGESPVV QSDEEGVEVD TALATLHSD- --------DS 351 400 ENSTTRP00000013328/1-330 DS bmy_00680T0/1-198 DS BACU005167/1-118 DS ENSP00000341680/1-351 DS ENSBTAP00000051067/1-324 DS