KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:43 2014 Check: 00 .. Name: BACU016627/1-313 Len: 328 Check: 7747 Weight: 1.00 Name: ENSP00000426964/1-299 Len: 328 Check: 7711 Weight: 1.00 Name: ENSBTAP00000051108/1-301 Len: 328 Check: 9904 Weight: 1.00 Name: ENSTTRP00000009370/1-303 Len: 328 Check: 4551 Weight: 1.00 Name: bmy_02662T0/1-271 Len: 328 Check: 566 Weight: 1.00 // 1 50 BACU016627/1-313 ---------- MLYSPLWVPL ALGAGGIWV- ----RLYIPC FGAIEPTCTA ENSP00000426964/1-299 ---------- ---------M SSAAGPDPSE APEERHFLRA L-ELQPPLAD ENSBTAP00000051108/1-301 ---------- ---------M SSTDGPDLAE APEERCFLRS A-RIKPAAAN ENSTTRP00000009370/1-303 ---------- ---------M SSAAGPDLAE APEERCFLRA L-EPMPLVSH bmy_02662T0/1-271 MHLKGCGGGG CLCAQITSAM SSAAGPDLAE APEERCFL-- ---------- 51 100 BACU016627/1-313 MHFFYHQRAP APQACAQKSC RLPDFRSTVC VMDEETEEGS SALGTGTAEA ENSP00000426964/1-299 MGRAEL-SSN ATTSLVQRRK QAWGRQS--- WLEQIWNAGP VC--QSTAEA ENSBTAP00000051108/1-301 TSNAALLVPP ATNTLVQRIK LKTGEGS--C WLRKIMESGP AC--PGTAEA ENSTTRP00000009370/1-303 PGRAELSSSN AHTPLVQRRK QGWGGKPLAE LGLKVLNTGA TC--QGTAEA bmy_02662T0/1-271 ---------- ---------- ---------- ---------- -----STAEA 101 150 BACU016627/1-313 AALERELLED YRFGRQQLVE WCGHASAVAV TKVFPLPAHS RKQRTVLVVC ENSP00000426964/1-299 AALERELLED YRFGRQQLVE LCGHASAVAV TKAFPLPALS RKQRTVLVVC ENSBTAP00000051108/1-301 AALERELLED YRFGRQQLVE WCGHASAVAV TKVFPLPALP RKQRTALVVC ENSTTRP00000009370/1-303 AALERELLED YRFGRQQLVE WCGHASAVAV TKVFPLPAHS RKQRTVLVVC bmy_02662T0/1-271 AALERELLED YRFGRQQLVE WCGHASAVAV TKVFPLPAHS RKQRTVLVVC 151 200 BACU016627/1-313 GPEQNGAVGL VCARHLRVFE YEPTIFYPTR SLDPLHRDLT TQCEKMDIPF ENSP00000426964/1-299 GPEQNGAVGL VCARHLRVFE YEPTIFYPTR SLDLLHRDLT TQCEKMDIPF ENSBTAP00000051108/1-301 GPEQNGAVGL ACARHLRVFE YEPTIFYPTR SPDPLHRDLT TQCEKMDIPF ENSTTRP00000009370/1-303 GPEQNGAVGL VCARHLRVFE YEPTIFYPTR SLDPLHRDLT TQCEKMDIPF bmy_02662T0/1-271 GPEQNGAVGL VCARHLRVFE YEPTIFYPTR SLDPLHRDLT TQCEKMDIPF 201 250 BACU016627/1-313 LSYLPTEVRL INDAYRLVVD AVLGPGVEPG KVGGPCMRAL ATLKLLSIPL ENSP00000426964/1-299 LSYLPTEVQL INEAYGLVVD AVLGPGVEPG EVGGPCTRAL ATLKLLSIPL ENSBTAP00000051108/1-301 LSYLPTEVQL INNAYRLVVD AVLGPGVEPA EVGGPCTRAL ATLKLLSIPL ENSTTRP00000009370/1-303 LSYLPTEVQL INNAYRLVVD AVLGPGVEPG KVGGPCMRAL ATLKLLSIPL bmy_02662T0/1-271 LSYLPTEVRL INDAYRLVVD AVLGPGVEPG KVGGPCMRAL ATLKLLSIPL 251 300 BACU016627/1-313 VSLDIPSGMS GWDPETGGDA EDGLRPDVLV SLAAPKQCAG RFSGRHHFVA ENSP00000426964/1-299 VSLDIP---S GWDAETGSDS EDGLRPDVLV SLAAPKRCAG RFSGRHHFVA ENSBTAP00000051108/1-301 VSLDIP---S GWDPETGGDA EDGLRPDVLV SLAAPKRCAG RFSGRHHFVA ENSTTRP00000009370/1-303 VSLDIP---S GWDPETGGDA EDGLRPDVLV SLAAPKQCAG RFSGRHHFVA bmy_02662T0/1-271 VSLDIPSGMS GWDPETGGDA EDGLRPDVLV SLAAPKQCAG RFSGRHHFVA 301 350 BACU016627/1-313 GRFVPDDVRR KFALRLPGYT GTDCIAAL ENSP00000426964/1-299 GRFVPDDVRR KFALRLPGYT GTDCVAAL ENSBTAP00000051108/1-301 GRFVPDDVRR KFALRLPGYT GTDCVAAL ENSTTRP00000009370/1-303 GRFVPDDVRR KFALRLPGYT GTDCIAAL bmy_02662T0/1-271 GRFVPDDVRR KFALRLPGYT GTDCIAAL