KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:51 2014 Check: 00 .. Name: ENSTTRP00000012157/1-585 Len: 884 Check: 6837 Weight: 1.00 Name: ENSBTAP00000051134/1-587 Len: 884 Check: 6591 Weight: 1.00 Name: BACU000898/1-832 Len: 884 Check: 9615 Weight: 1.00 Name: bmy_06962T0/1-362 Len: 884 Check: 6693 Weight: 1.00 Name: ENSP00000008527/1-586 Len: 884 Check: 2847 Weight: 1.00 // 1 50 ENSTTRP00000012157/1-585 MGVNAVHWFR KGLRLHDNPA L-ECIQGADT IRCVYILDPW FAGSSNVGIN ENSBTAP00000051134/1-587 MGVNAVHWFR KGLRLHDNPA LKECIQGADT IRCVYILDPW FAGSSNVGIN BACU000898/1-832 ---------- ---------- ---------- ---------- ---------- bmy_06962T0/1-362 MGVNAVHWFR KGLRLHDNPA LKECIQGADT IRCVYILDPW FAGSSNVGIN ENSP00000008527/1-586 MGVNAVHWFR KGLRLHDNPA LKECIQGADT IRCVYILDPW FAGSSNVGIN 51 100 ENSTTRP00000012157/1-585 RWRFLLQCLE DLDANLRKLN SRLFVIRGQP ADVFPRLFKE WNITKLSIEY ENSBTAP00000051134/1-587 RWRFLLQCLE DLDANLRKLN SRLFVIRGQP ADVFPRLFKE WNITKLSIEY BACU000898/1-832 --RFLLQCLE DLDANLRKLN SRLFVIRGQP ADVFPRLFKE WNITKLSIEY bmy_06962T0/1-362 RWR------- ---------- ---------- ---------- ---------- ENSP00000008527/1-586 RWRFLLQCLE DLDANLRKLN SRLFVIRGQP ADVFPRLFKE WNITKLSIEY 101 150 ENSTTRP00000012157/1-585 DSEPFGKERD AAIKKLATEA GVEVIVRISH TLYDLDKIIE LNGGQPPLTY ENSBTAP00000051134/1-587 DSEPFGKERD AAIKKLATEA GVEVIVRISH TLYDLDKIIE LNGGQPPLTY BACU000898/1-832 DSEPFGKERD AAIKKLATEA GVEVIVRISH TLYDLDKIIE LNGGQPPLTY bmy_06962T0/1-362 ---------- ---------- ---------- -------IIE LNGGQPPLTY ENSP00000008527/1-586 DSEPFGKERD AAIKKLATEA GVEVIVRISH TLYDLDKIIE LNGGQPPLTY 151 200 ENSTTRP00000012157/1-585 KRFQTLISKM EPLEIPVETI TSEVIEKCTT PLSDDHDEKY GVPSLEELGF ENSBTAP00000051134/1-587 KRFQTLISKM EPLEIPVETI TSEVIEKCTT PLSDDHDEKY GVPSLEELGF BACU000898/1-832 KRFQTLISKM EPLEIPVETI TSEVIEKCTT PLSDDHDEKY GVPSLEELGF bmy_06962T0/1-362 KRFQTLISKM EPLEIPVETI TSEVIEKCTT PLSDDHDEKY GVPSLEELGF ENSP00000008527/1-586 KRFQTLISKM EPLEIPVETI TSEVIEKCTT PLSDDHDEKY GVPSLEELGF 201 250 ENSTTRP00000012157/1-585 DTDGLSSAVW PGGETEALTR LERHLERKXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000051134/1-587 DTDGLPSAVW PGGETEALTR LERHLERKAW VANFERPRMN ANSLLASPTG BACU000898/1-832 DTDGLSSAVW PGGETEALTR LERHLERKAW VANFERPRMN ANSLLASPTG bmy_06962T0/1-362 DTDGLSSAVW PGGETEALTR LERHLERKAW VANFERPRMN ANSLLASPTG ENSP00000008527/1-586 DTDGLSSAVW PGGETEALTR LERHLERKAW VANFERPRMN ANSLLASPTG 251 300 ENSTTRP00000012157/1-585 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXK FPPLS-YGQL LWREFFYTAA ENSBTAP00000051134/1-587 LSPYLRFGCL SCRLFYFKLT DLYKKVKKNS SPPLSLYGQL LWREFFYTAA BACU000898/1-832 LSPYLRFGCL SCRLFYFKLT DLYKKVKKNS SPPLSLYGQL LWREFFYTAA bmy_06962T0/1-362 LSPYLRFGCL SCRLFYFKLT DLYK------ ---------- ---------- ENSP00000008527/1-586 LSPYLRFGCL SCRLFYFKLT DLYKKVKKNS SPPLSLYGQL LWREFFYTAA 301 350 ENSTTRP00000012157/1-585 TNNPRFDKME GNPICVQIPW DKNPEALAKW AEGRTGFPWI DAIMTQLRQE ENSBTAP00000051134/1-587 TNNPRFDKME GNPICVQIPW DKNPEALAKW AEGRTGFPWI DAIMTQLRQE BACU000898/1-832 TNNPRFDKME GNPICVQIPW DKNPEALAKW AEGRTGFPWI DAIMTQLRQE bmy_06962T0/1-362 ---------- ---------- ---------- ---------- ---------- ENSP00000008527/1-586 TNNPRFDKME GNPICVQIPW DKNPEALAKW AEGRTGFPWI DAIMTQLRQE 351 400 ENSTTRP00000012157/1-585 GWIHHLARHA VACFLTRGDL WISWEEGMKV FEELLLDADW SINAGSWMWL ENSBTAP00000051134/1-587 GWIHHLARHA VACFLTRGDL WISWEEGMKV KKHLFLNYRE SVNLKSFQWL BACU000898/1-832 GWIHHLARHA VACFLTRGDL WISWEEGMKV FEELLLDADW SINAGSWMWL bmy_06962T0/1-362 ---------- ---------- --------KV FEELLLDADW SINAGSWMWL ENSP00000008527/1-586 GWIHHLARHA VACFLTRGDL WISWEEGMKV FEELLLDADW SINAGSWMWL 401 450 ENSTTRP00000012157/1-585 SCSSFFQQFF HCYCPVGFGR RTDPNGDYIR RYLPVLRGFP AKYIYDPWNA ENSBTAP00000051134/1-587 NQPTHQHQVV HEYSPLLMGS RDEEKGNNKR RYLPVLRGFP AKYIYDPWNA BACU000898/1-832 SCSSFFQQFF HCYCPVGFGR RTDPNGDYIR RYLPVLRGFP AKYIYDPWNA bmy_06962T0/1-362 SCSSFFQQFF HCYCPVGFGR RTDPNGDYIR RYLPVLRGFP AKYIYDPWNA ENSP00000008527/1-586 SCSSFFQQFF HCYCPVGFGR RTDPNGDYIR RYLPVLRGFP AKYIYDPWNA 451 500 ENSTTRP00000012157/1-585 PEGIQKVAKC LIGVNYPKPM VNHAEASRLN IERMKQIYQQ LSRYRGLGLL ENSBTAP00000051134/1-587 PEGIQKVAKC LIGVNYPKPM VNHAEASRLN IERMKQIYQQ LSRYRGLGLL BACU000898/1-832 PEGIQKVAKC LIGVNYPKPM VNHAEASRLN IERMKQIYQQ LSRYRGLGLL bmy_06962T0/1-362 PEGIQKVAKC LIGVNYPKPM VNHAEASRLN IERMKQIYQQ LSRYRGLGLL ENSP00000008527/1-586 PEGIQKVAKC LIGVNYPKPM VNHAEASRLN IERMKQIYQQ LSRYRGLGLL 501 550 ENSTTRP00000012157/1-585 ASVPSNPNGN GGLMGYSPGE NIPGYSSSG- ---------- ---------- ENSBTAP00000051134/1-587 ASVPSNPNGN GGLMGYSPGE NIPGCSSNA- ---------- ---------- BACU000898/1-832 ASVPSNPNGN GGLMGYSPGE NIPGCSSSGT SFTYTTDNQS NRENKKTVEK bmy_06962T0/1-362 ASVPSNPNGN GGLMGYSPGE NIPGCSSSGK NIQ------- ---------- ENSP00000008527/1-586 ASVPSNPNGN GGFMGYS-AE NIPGCSSSG- ---------- ---------- 551 600 ENSTTRP00000012157/1-585 ---------- -SCTPGSGIL ---------- ---------- --------HY ENSBTAP00000051134/1-587 ---------- -SCTQGSGIL ---------- ---------- --------HY BACU000898/1-832 LYKLSVDIRK IQRLKGWVLL EDETYVEEIA NILQQVGADE TAVARILEHY bmy_06962T0/1-362 --------KE YRCSRNWWAV ---------- ---------- --------QY ENSP00000008527/1-586 ---------- -SCSQGSGIL ---------- ---------- --------HY 601 650 ENSTTRP00000012157/1-585 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000051134/1-587 ---------- ---------- ---------- ---------- ---------- BACU000898/1-832 PEAIICSPPA VNTQRELWQS VCKNEKELVK LIEQFPESFF TVKDQENQKL bmy_06962T0/1-362 ---------- ---------- ---------- ---------- ---------- ENSP00000008527/1-586 ---------- ---------- ---------- ---------- ---------- 651 700 ENSTTRP00000012157/1-585 ---------- ---------- -----AYGDS QQTHLLKQGR SSTCTGLSS- ENSBTAP00000051134/1-587 ---------- ---------- -----AHGDS QQTHLLKQGR SSTGAGLGS- BACU000898/1-832 NVQFFQELGL KNVVISRFLT TASNIFHTPV EKNKQMIKVL QESYLNLGGS bmy_06962T0/1-362 ---------- ---------- -----FFS-- ---------- ---------- ENSP00000008527/1-586 ---------- ---------- -----AHGDS QQTHLLKQGR SSMGTGLSG- 701 750 ENSTTRP00000012157/1-585 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000051134/1-587 ---------- ---------- ---------- ---------- ---------- BACU000898/1-832 EVNMKVWLLK LLSQNPFILL NSSASIKETL EFLQEQGFTN FEILQLLSKL bmy_06962T0/1-362 ---------- ---------- ---------- ---------- ---------- ENSP00000008527/1-586 ---------- ---------- ---------- ---------- ---------- 751 800 ENSTTRP00000012157/1-585 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000051134/1-587 ---------- ---------- ---------- ---------- ---------- BACU000898/1-832 KGFLFQLCPR SIQNSMSFSK NAFKCTDHDL KQLVLKCPAL LYYSVPVLEE bmy_06962T0/1-362 ---------- ---------- ---------- ---------- ---------- ENSP00000008527/1-586 ---------- ---------- ---------- ---------- ---------- 801 850 ENSTTRP00000012157/1-585 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000051134/1-587 ---------- ---------- ---------- ---------- ---------- BACU000898/1-832 RIQGLLKEGI SIAQIRETPK VLELTPQIVQ YRVRKLNSLG YRIKDGYLAN bmy_06962T0/1-362 ---------- ---------- ---------- ---------- ---------- ENSP00000008527/1-586 ---------- ---------- ---------- ---------- ---------- 851 900 ENSTTRP00000012157/1-585 --GKRPSQEE DTQSIGPKVQ RQSTN----- ---- ENSBTAP00000051134/1-587 --GKRPSQEE DTQSIGPKVQ RQSTN----- ---- BACU000898/1-832 LNGTKKEFEA NFGKIQAKKG RPLFNPVAPL NVEE bmy_06962T0/1-362 ---------- ---------- ---------- ---- ENSP00000008527/1-586 --GKRPSQEE DTQSIGPKVQ RQSTN----- ----