KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:52 2014 Check: 00 .. Name: ENSP00000378286/1-574 Len: 574 Check: 7649 Weight: 1.00 Name: ENSBTAP00000051139/1-513 Len: 574 Check: 1053 Weight: 1.00 Name: ENSTTRP00000002321/1-565 Len: 574 Check: 4620 Weight: 1.00 Name: bmy_19273T0/1-518 Len: 574 Check: 764 Weight: 1.00 Name: BACU005364/1-330 Len: 574 Check: 4249 Weight: 1.00 // 1 50 ENSP00000378286/1-574 MLREFSKWGV EASPGKAWER KRSLLRGAVG RYRGATGGDL FWAPFPSWGT ENSBTAP00000051139/1-513 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002321/1-565 -LREFPEWGV EVSPAKAWG- -RLLVEGGAG SYRGATGGDL PRVPFPSWGA bmy_19273T0/1-518 ---------- ---------- ---------- ---------- ---------- BACU005364/1-330 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000378286/1-574 MEFPEHSQQL LQSLREQRSQ GFLCDCTVMV GSTQFLAHRA VLASCSPFFQ ENSBTAP00000051139/1-513 MEFPEHSQQL LQSLREQRSQ GFLCDCTVMV GSTQFLAHRA VLASCSPFFQ ENSTTRP00000002321/1-565 MEFPEHSQQL LQSLREQRSQ GFLCDCTVMV GSTQFLAHRA VLASCSPFFQ bmy_19273T0/1-518 MEFPEHSQQL LQSLREQRSQ GFLCDCTVMV GSTQFLAHRA VLASCSPFFQ BACU005364/1-330 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000378286/1-574 LFYKERELDK RDLVCIHNEI VTAPAFGLLL DFMYAGQLTL RGDTPVEDVL ENSBTAP00000051139/1-513 LFYKERELDK RDLVCIHNEI VTAPAFGLLL DFMYAGQLVL RGDTPVEDVL ENSTTRP00000002321/1-565 LFYKERELDK RDLVCIHNEI VTAPAFGLLL DFMYAGQLVL RGDTPVEDVL bmy_19273T0/1-518 LFYKERELDK RDLVCIHNEI VTAPAFGLLL DFMYAGQLVL RGDTPVEDVL BACU005364/1-330 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000378286/1-574 AAASYLHMND IVKVCKRRLQ ARALAEADST KKEEETNSQL PSLEFLSSTS ENSBTAP00000051139/1-513 AAASYLHMND IVKVCKRRLQ ARGLAEADST KKEEETNSQP PNLEFLSSTS ENSTTRP00000002321/1-565 AAASYLHMND IVKVCKRRLQ ARALAEADST KKEEETNSQH PNLEFLSSTS bmy_19273T0/1-518 AAASYLHMND IVKVCKRRLQ ARALAEADST KKEEETNSQH PNLEFLSSTS BACU005364/1-330 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000378286/1-574 RGTQPSLASA ETSGHWGKGE WKGSAAPSPT VRPPDEPPMS SGADTTQPGM ENSBTAP00000051139/1-513 RGSQPSLASA ETSGPWGKGE WKGSAAPSP- ICPPDEPPMP AGADTTQPGV ENSTTRP00000002321/1-565 RGPQPSLASA ETSGHWGKGE WKGSAAPSPT VCPPNEPPMP AGADTTQPGV bmy_19273T0/1-518 RGPQPSLASA ETSGHWGKGE WKGSAAPSPT VCPPDEPPMP AGADTTQPGV BACU005364/1-330 ---------- ---------- ---------- --------MP AGADTTQPGV 251 300 ENSP00000378286/1-574 EVDAPHLRAP HPPVADVSLA SPSSSTETIP TNYFSSGISA VSLEPLPSLD ENSBTAP00000051139/1-513 EVESSHLQAP PVPVADVSLA SPSSSTETNP ANYFSAGLPT VSVEPLAPLD ENSTTRP00000002321/1-565 EVDSPHLRAP PPPVADVSLA SPSSSTETNP ANYFSSGLPT VSVEPLAPLD bmy_19273T0/1-518 EVDSLHLRAP PPPVADVSLA SPSSSTETNP ANYFSSGLPT VSVEPLAPLD BACU005364/1-330 EVDSLHLRAP PPPVADVSLA SPSSSTETNP ANYFSSGLPT VSVEPLAPLD 301 350 ENSP00000378286/1-574 VGPESLRVVE PKDPGGPLQG FYPPASAPTS APAPVSAPVP SQAPAPAEAE ENSBTAP00000051139/1-513 VGSESLRVVE PRATGGPLQG FYPPT----S AAV----PVP SEAPAPAEAE ENSTTRP00000002321/1-565 VVSENLRVVE PRGTGGPLQG FYPPA----S AAVPVPAPVP SQAPAPAEAE bmy_19273T0/1-518 VVSENLRVVE PRGTGGPLQG FYPPA----S AAVPVPAPVP SQAPAPAEAE BACU005364/1-330 VVSENLRVVE PRGTGGPLQG FYPPA----S AAVPVPAPVP SQAPAPAEAE 351 400 ENSP00000378286/1-574 LVQVKVEAIV ISDEETDVSD EQPQGPERAF PSGGAVYGAQ PSQPEAFEDP ENSBTAP00000051139/1-513 LVQVKVEAIV ISDEEPDVSE EQPRGPEGLF PPGGAMYGGQ PPQPEAFEEP ENSTTRP00000002321/1-565 LVQVKVEAIV ISDEEPDASE EQPRGPEGLF PPGGAVYGEQ PPQPEAFEEP bmy_19273T0/1-518 LVQVKVEAIV ISDEEPDASE EQPRGPEGLF PPGGAMYGEQ PPQPEAFEEP BACU005364/1-330 LVQVKVEAIV ISDEEPDASE EQPRGPEGLF PPGGAMYGEQ APQPEAFEEP 401 450 ENSP00000378286/1-574 GAAGLEEVGP SDHFLPTDPH LPYHLLPGAG QYHRGLVTSP LPAPASLHEP ENSBTAP00000051139/1-513 RAAGLEEVGP SDHFLPPDPH LPYHLLPGPG QYHRGLVTSP LPAPPALHEP ENSTTRP00000002321/1-565 RAAGLEEVGA SDHFLPPDPH LPYHLLPGPG QYHRGLVTSP LPAPPALHEP bmy_19273T0/1-518 RAAGLEEVGA SDHFLPPDPH LPYHLLPGPG QYHRGLVTSP LPAPPTLHEP BACU005364/1-330 RAAGLEEVGA SDHFLPPDPH LPYHLLPGPG QYHRGLVTSP LPAPPTLHEP 451 500 ENSP00000378286/1-574 LYLSSEYEAA PGSFGVFTED VPTCKTCGKT FSCSYTLRRH ATVHTRERPY ENSBTAP00000051139/1-513 LYLPSEYETA PGSFGGFTED VPTCKTCGKT FSCSYTLRRH ATVHTRERPY ENSTTRP00000002321/1-565 LYLPSEYEAA PGSFGVFTED VPTCKTCGKT FSCSYTLRRH ATVHTRERPY bmy_19273T0/1-518 LYLPSEYEAA PGSFGVFTED VPTCKTCGKT FSCSYTLRRH ATVHTRERPY BACU005364/1-330 LYLPSEYEAA PGSFGVFTED VPTCKTCGKT FSCSYTLRRH ATVHTRERPY 501 550 ENSP00000378286/1-574 ECRYCLRSYT QSGDLYRHIR KAHNEDLAKR SKPDPEVGPL LGVQPLPGSP ENSBTAP00000051139/1-513 ECRYCLRSYT QSGDLYRHIR KAHNEDLAKR SKPDPEAGPV LGAQPLPGSP ENSTTRP00000002321/1-565 ECRYCLRSYT QSGDLYRHIR KAHNEDLAKR SKPDPEAGPL LGVQPIPGSP bmy_19273T0/1-518 ECRYCLRSYT QSGDLYRHIR KAHNEDLAKR SKPDPEAGPL LGVQPIPGSP BACU005364/1-330 ECRYCLRSYT QSGDLYRHIR KAHNEDLAKR SKPDPEAGPL LGVQPIPGSP 551 600 ENSP00000378286/1-574 TADRQSSSGG GPPKDFVLAP KTNI ENSBTAP00000051139/1-513 TADRQNSSVG GPPKDFVLGS KN-- ENSTTRP00000002321/1-565 TADRQNSSAG GPPKDFVLAP KT-- bmy_19273T0/1-518 TADRQNSSAG GPPKNFVLGP KN-- BACU005364/1-330 TADRQNSSAG GPPKNFVLGP KN--