KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:53 2014 Check: 00 .. Name: ENSBTAP00000051160/1-339 Len: 441 Check: 1408 Weight: 1.00 Name: ENSP00000301327/1-412 Len: 441 Check: 5709 Weight: 1.00 Name: ENSTTRP00000009399/1-412 Len: 441 Check: 8443 Weight: 1.00 Name: bmy_07552T0/1-440 Len: 441 Check: 8126 Weight: 1.00 Name: BACU011403/1-412 Len: 441 Check: 8072 Weight: 1.00 // 1 50 ENSBTAP00000051160/1-339 ---------- ---------- --------ML GKLLPLAGLY LVQGLPYGLQ ENSP00000301327/1-412 ---------- ---------- --------MR GKLLPLAGLY LVQGLPYGLQ ENSTTRP00000009399/1-412 ---------- ---------- --------MR GKLLPLAGLY LVQGLPYGLQ bmy_07552T0/1-440 MPPRPALNPD PATRAWVPAP APAPRLLAMR GKLLPLAGLY LVQGLPYGLQ BACU011403/1-412 ---------- ---------- --------MR GKLLPLAGLY LVQGLPYGLQ 51 100 ENSBTAP00000051160/1-339 SGLLPVLLRA RGLSLTRVGL AKALYAPWLF KLVWAPLVDK WGSSRGWLAL ENSP00000301327/1-412 SGLLPVLLRA GGLSLTRVGL AKVLYAPWLL KLAWAPLVDA QGSARAWVTR ENSTTRP00000009399/1-412 SGLLPVLLRA RGLSLTRVGL AKALYAPWLF KLVWAPLVDT RGSPRAWLTL bmy_07552T0/1-440 SGLLPVLLRA RGLSLTRVGL AKALYAPWLF KLVWAPLVDT RGSPRAWLTL BACU011403/1-412 SGLLPVLLRA RGLSLTRVGL AKALYAPWLF KLVWAPLVDT RGSPRAWLTL 101 150 ENSBTAP00000051160/1-339 STAALGLLCG LLATLPPAGP GGAALPVPVA ALLLLLNLAA AVQDVALDML ENSP00000301327/1-412 STAGLGLVCG LLAGLPPPGA GQAGLPAAVA GLLLLLNLGA AMQDVALDAL ENSTTRP00000009399/1-412 STAALGLVCG LLASHPPAAA GQAGLPVTVA GLLLLLNLAA AVQDVALDTL bmy_07552T0/1-440 STAALGLVCG LLASHPPATA GQAGLPVTVA GLLLLLNLAA AVQDVALDML BACU011403/1-412 STAALGLVCG LLASHPPATA GQAGLPVTVA GLLLLLNLAA AVQDVALDML 151 200 ENSBTAP00000051160/1-339 AVRLLEPAEL GPGNTVQVVA YKLGAALASG GLLALLPALS WTLLFLLLAA ENSP00000301327/1-412 AVQLLEPAEL GPGNTVQVVA YKLGAALAGG ALLALLPTFS WPQLFLLLAA ENSTTRP00000009399/1-412 AVRLLEPAEL GPGNTVQVVA YKLGAVLAGG GLLAFVPTLS WPLLFLLLAA bmy_07552T0/1-440 AVRLLEPAEL GPGNTVQVVA YKLGAVLAGG GLLALVPTLS WPLLFLLLAA BACU011403/1-412 AVRLLEPAEL GPGNTVQVVA YKLGAVLAGG GLLALVPTLS WPLLFLLLAA 201 250 ENSBTAP00000051160/1-339 TYWLAAAAAW VAPALRQLPV PPPSAHPRPS LRLQQDLLAV PGTLWTAGFV ENSP00000301327/1-412 TYWLAAALAW AAPALRRLPQ QPPSEQRPHT AHLLRDVLAV PGTVWTAGFV ENSTTRP00000009399/1-412 TYWLAAALTW VAPALQQLPT PLPSEHPRHT LHLGQDLLAV PGTLWTVGFV bmy_07552T0/1-440 TYWLAAALTW VAPALRQLPT PLPSEHPRHT LHLGQDLLAV PGTLWTVGFV BACU011403/1-412 TYWLAAALTW VAPALRQLPP PLPSEHPRHT LHLGQDLLAV PGTLWTVGFV 251 300 ENSBTAP00000051160/1-339 LTYKLGEQGA SGLFPLLLLD GGISTAELGL WNGVGAVLCS IAGSSLGGVL ENSP00000301327/1-412 LTYKLGEQGA SSLFPLLLLD HGVSAPELGL WNGVGAVVCS IAGSSLGGTL ENSTTRP00000009399/1-412 LTYKLGEQGT SGLFPLLLLD CGISAPELGL WNGVGAVACS IAGSSLGGAL bmy_07552T0/1-440 LTYKLGEQGT SALFPLLLLD CGISTPELGL WNGVGAVACS IAGSSLGGAL BACU011403/1-412 LTYKLGEQGT SALFPLLLLD CGISTPELGL WNGVGAVACS IAGSSLGGAL 301 350 ENSBTAP00000051160/1-339 LARCWGNPAE PVSAAPP--- GGLGHN---- HHLHHDDALQ SAGTQ----- ENSP00000301327/1-412 LAKHW-KLLP LLRSVLRFRL GGLACQTALV FHLDTLGASM DAGTILRGSA ENSTTRP00000009399/1-412 LARRR-QPLP LLKSALQFRL GGLACQTAVL FHLDSPGASL APSTVLRGAA bmy_07552T0/1-440 LARRR-QPLP LLKSALQFRL GGLACQTALL FHLDSPGASL APSTVLRGAA BACU011403/1-412 LARRR-QPLP LLKSALQFRL GGLACQTALL FHLDSPGASL APSTVLRGAA 351 400 ENSBTAP00000051160/1-339 ---------- ---------- ----CP--AG HTLQSPGHS- ---------- ENSP00000301327/1-412 LLSLCLQHFL GGLVTTVTFT GMMRCSQLAP RALQATHYSL LATLELLGKL ENSTTRP00000009399/1-412 LLSLCLQHFL GGLVTTTTFT LMMRCSQLAP SALQATHYSL LATLELLGKL bmy_07552T0/1-440 LLSLCLQHFL GGLVTTTTFT LMMRCSQLAP SALQATHYSL LATLELLGKL BACU011403/1-412 LLSLCLQHFL GGLVTTTTFT LMMRCSQLAP SALQATHYSL LATLELLGKL 401 450 ENSBTAP00000051160/1-339 ------GAAG EAAGGHA--- ---------- ---GRSPG-- - ENSP00000301327/1-412 LLGTLAGGLA DGLGPHPCFL LLLILSAFPV LYLDLAPSTF L ENSTTRP00000009399/1-412 LMGTLAGALA DSLGPRLCFS VFLALSAMPM LYLGLAPNTL A bmy_07552T0/1-440 LMGTLAGALA DSLGPRLCFF VFLALSAAPM LYLGLAPNTL A BACU011403/1-412 LMGTLAGALA DSLGPCLCFF VFLALSAAPM LYLGLAPNTL A