KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 18:00:55 2014 Check: 00 ..
Name: bmy_15486T0/1-313 Len: 339 Check: 1887 Weight: 1.00
Name: ENSTTRP00000016569/1-311 Len: 339 Check: 9648 Weight: 1.00
Name: BACU010931/1-310 Len: 339 Check: 9328 Weight: 1.00
Name: ENSP00000386151/1-311 Len: 339 Check: 7698 Weight: 1.00
Name: ENSBTAP00000051187/1-320 Len: 339 Check: 1982 Weight: 1.00
//
1 50
bmy_15486T0/1-313 ---------- ----MEVENQ TRVTRFILVA FPGNRGVRAT VFLTYLVACI
ENSTTRP00000016569/1-311 ---------- ----MEVENQ TRVTRFILVG FPGNWGVRAA VFLMLLVACI
BACU010931/1-310 ---------- ----MEVENQ TRVTRFILVA FPGNWGVRAT VFLMFLVACI
ENSP00000386151/1-311 ---------- ----MELENQ TRVTKFILVG FPGSLSMRAA MFLIFLVAYI
ENSBTAP00000051187/1-320 VIFSPRRVKP CVSNMEVENQ TRVTRFILVG FPGSWGMRAA VFLIFLMAYI
51 100
bmy_15486T0/1-313 LTVAENVIII LLVQQNRPLH KPVYFFLDSL SFSETWYLSV PVPKVLFSFR
ENSTTRP00000016569/1-311 PTVAGNVIIV VLVQQNLPLH EPVYFFVASL S-LETWCISV TVPRLLFSFW
BACU010931/1-310 LTVAEKVIII LLVQQNRPLH KPMYFFLAKL SFSETWYLSV TVPTVLFSFW
ENSP00000386151/1-311 LTVAENVIII LLVLQNRPLH KPMYFFLANL SFLETWYISV TVPKLLFSFW
ENSBTAP00000051187/1-320 LTVAENVTII LLVQQNRPLH KPMYFFLANL SFLETWYISV TVPKLLFSFW
101 150
bmy_15486T0/1-313 SVSSGVSFTH CMTQLYFFIA LLCTECVLLA AVACDRYVAI CRPLRYPTIM
ENSTTRP00000016569/1-311 SVSNSISFTH CMIQLYFFIA LMCTERVLLA AVACDRDVAT CRPLHCPTIM
BACU010931/1-310 SVSSSISFTH CMIQLYFFIA LMCTECVLLA AVAYGRYVAI CRPLCYPIIM
ENSP00000386151/1-311 SVNNSISFTL CMIQLYFFIA LMCTECVLLA AMAYDRYVAI CRPLHYPTIM
ENSBTAP00000051187/1-320 SVSKSISFAH CMIQLYFFIA LMCTECVLLA TMAYDRYVAI CRPLHYPTIM
151 200
bmy_15486T0/1-313 SHGLCFLLPL GSWTNGFGIS LAKIYFISCL SFCGPNAINH FFCDISLSMH
ENSTTRP00000016569/1-311 SHGLCFLLPL GSCTNGFGIS LAKIYFISCL SFCGPNIVDH FFCDICPVLK
BACU010931/1-310 SHGLCFLLPL G-WTNGFGIS LAKIYFISCL SFCGPNVINH FFCDISPVLN
ENSP00000386151/1-311 SHGLCFRLAL GSWAIGFGIS LAKIYFISCL SFCGPNVINH FFCDISPVLN
ENSBTAP00000051187/1-320 SHGLCFRLAL GSWTIGFGIS LAKTYFISRL SFCGPNVINH FFCDISPVLN
201 250
bmy_15486T0/1-313 KGCGLFDIKK SKASNSEAKL LDQNNFFNLA FCSEGC---- -----HGNEH
ENSTTRP00000016569/1-311 LSCT--DMST AELVDFVPAL VIFLSPPALT VLSCGCILAT ILRMPTGKQK
BACU010931/1-310 LSCT--DMST AESVDFVLAL AIFLLPLSLT VLSYGCILAT ILRMPTGKQK
ENSP00000386151/1-311 LSCT--DMSI TELVDFILAL VIFLFPLFIT VLSYGCILAT ILCMPTGKQK
ENSBTAP00000051187/1-320 LSCT--DMST AELVDFVLAL VIFLLPLTVT ILSYGCILAT VLRMPTGKQK
251 300
bmy_15486T0/1-313 P---CMIYLC VVSNNHHIVV FRGFSMRRET GKQGKKRREG SSADKVSKTL
ENSTTRP00000016569/1-311 AFPACASHLV VGTIFSSATI FM-YVWPRAI HAFNMNKVIS IFYAIVTPAL
BACU010931/1-310 AFSTCASHLV VVTIFCSATI FM-YVWSRAI HAFNMNKVIS IFYATVTPAL
ENSP00000386151/1-311 AFSTCASHLV VVTIFYSAII FM-YARPRVI HAFNMNKIIS IFYAIVTPSL
ENSBTAP00000051187/1-320 AFSTCASHLV VVTIFYSATI FM-YARPRAI HAFNMNKVIS IFYAIVTPAL
301 350
bmy_15486T0/1-313 RSNGGRKEVP EAASREYESA AEKEGLTKFK DTTKLRSHC
ENSTTRP00000016569/1-311 NPF-----IY CLRNREV--- --REALKKLA YCQAIRSGE
BACU010931/1-310 NPF-----IY CLRNREV--- --REALKKLA YCQAIRSG-
ENSP00000386151/1-311 NPF-----IY CLRNREV--- --KEALKKLA YCQASRSD-
ENSBTAP00000051187/1-320 NPF-----IY CLRNREV--- --KEAVKKLA YCQ------