KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:57 2014 Check: 00 .. Name: ENSP00000454591/1-356 Len: 363 Check: 2418 Weight: 1.00 Name: ENSBTAP00000051338/1-356 Len: 363 Check: 4062 Weight: 1.00 Name: ENSTTRP00000007117/1-356 Len: 363 Check: 3633 Weight: 1.00 Name: bmy_22409T0/1-178 Len: 363 Check: 3027 Weight: 1.00 Name: BACU012810/1-279 Len: 363 Check: 7671 Weight: 1.00 // 1 50 ENSP00000454591/1-356 -------LRQ ILFGNTVHVF SYNWKKAYFR FHDPSSELAF TLEVGKGGAR ENSBTAP00000051338/1-356 -------LRQ TLFGNTIQVF SSDWTKAYFQ FHEPFSDLAF ALQVGKGGVQ ENSTTRP00000007117/1-356 -------LRQ ILFGNTAQVF SSDWTKAYFR FHDPFSDLAF ALEVGKGGAR bmy_22409T0/1-178 MAKAVRKLRQ SLFGNTVQVF SSDWTEAYFR FHDPFSDLAF ALEVGKGGAR BACU012810/1-279 ---------- ---------- ---------- ---------- ---MGKGGAR 51 100 ENSP00000454591/1-356 SIQMAVQGSI IKYLLFTRKG KDCNLGNLCE ISKKEQEQAL AAALAGILWA ENSBTAP00000051338/1-356 SIQMAVQGPI IKYLLFTRKG KDCNFLSLCR ISKHDQDHTL AAALAGILWA ENSTTRP00000007117/1-356 SIQMAVQGCI IKYLLFTRKG KDCNFLSLCA MSKQGQKHAL AAALAGILWA bmy_22409T0/1-178 SIQMAVQGSI IKYLLFTRKG KDCNFLSLRA ISKRGQEHAL AAALAGVLWA BACU012810/1-279 SIQMAVQGSI IKYLLFTRKG KDCNFLSLRA TSKREQDHAL AAALAGALWA 101 150 ENSP00000454591/1-356 AGAAQKATIC LVTEDIYVAS TPDYSVDNFT ERLQLFEFLE KEAAEKFIYD ENSBTAP00000051338/1-356 AGAAQKATIC LITEDTYVAP TPGYSGDGFS ERLQLFELSD KEATEKFIYD ENSTTRP00000007117/1-356 AGAARKATIC LVTEDTYVAP TPDYSGDGFT ERLQLFELLE KEATEKFIYD bmy_22409T0/1-178 AGAARKATIC LVTEDAYVAP TPDYSADGVT ERLQLFELLE KEATEKFIYD BACU012810/1-279 AGAARKATIC LVTEDAYIAP TPDYSGDGVT ERLQLFELLE KEATEKFIYD 151 200 ENSP00000454591/1-356 HLLCFRGEGS HGVILFLYSL IFSRTFERLQ MDLDVTTTQL LQPNAGGFLC ENSBTAP00000051338/1-356 HLQCFKGEGC HGVILFLYSL IFSRTFERLQ EELDVSTTHL LQPNAGGFLC ENSTTRP00000007117/1-356 HVQCFKGEGS HGVILFLYSL IFSRTFERLQ KDLDVSTTHL LRPNAGGFLC bmy_22409T0/1-178 HLQCFKGEGS HGVILFLYSL IFSRTFER-- ---------- ---------- BACU012810/1-279 HLQCFKGEGS HGVILFLYSL IFSRTFERLQ KDLDVSTAPL LRPNAGGFLC 201 250 ENSP00000454591/1-356 RQAVLNMILT GRASPNVFNG CEEGKSQETL HGVLTRSDVG YLQWGKDASE ENSBTAP00000051338/1-356 RQAVLNLILT GRASPHTFNG CQKGKSQEIL HGVPTRSDIG YLQWGKGTSD ENSTTRP00000007117/1-356 RQAVLNMILT GRASPHVFNG YQKGKSQETL CGVLTRSDVG YLQWHKDTSE bmy_22409T0/1-178 ---------- ---------- ---------- ---------- ---------- BACU012810/1-279 SQAVLNMILT GRASPHVFNG YQEGKSQEML CGVLTHSDIG YLQWRKDTSE 251 300 ENSP00000454591/1-356 DDRLSQVGSM LKTPKLPIWL CNINGNYSIL FCTNRQLLSD WKMERLFDLY ENSBTAP00000051338/1-356 DDRLSQVGSM LKTPKLPVWL CNINGNYSVL FSTNRQLLSD WKVERLFDLY ENSTTRP00000007117/1-356 DDRLSQVGSM LKTPKLPIWL CNINGNYSVL FSTDRQLLSD WKVERLFDLY bmy_22409T0/1-178 ---------- ---------- ---------- ---------- ---------- BACU012810/1-279 DDRLSQVGSM LKTPKLPIWL CNINGNYSVL FSTNRQLLSD WKVERLFDLY 301 350 ENSP00000454591/1-356 FYSGQPSQKK LVRLTIDTHS HHWERDQQEE KHGPRRRFSP VEMAIRTKWS ENSBTAP00000051338/1-356 FYSGQPAQKK PAHLTIDTHS HHWESVQHED EHRPGRRFSP LEMVIRTKWR ENSTTRP00000007117/1-356 FYSGQPAQNK PAHLTVDTHS HHWERVRHED EHRPGRRFSP VEAAIRTRWG bmy_22409T0/1-178 ---------- ---------- ---------- ---------- ---------- BACU012810/1-279 FYSGQPAQNK PAHLTV---- ---------- ---------- ----VSQVWC 351 400 ENSP00000454591/1-356 EATINWNGTV PFF ENSBTAP00000051338/1-356 DATINWNGSI PFF ENSTTRP00000007117/1-356 EATVSWNGTV PLY bmy_22409T0/1-178 ---------- --- BACU012810/1-279 ---------- ---