KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 18:00:58 2014  Check: 00 ..

 Name: ENSP00000339067/1-258     Len:    259  Check:  3542  Weight:  1.00
 Name: ENSBTAP00000051346/1-257  Len:    259  Check:  1857  Weight:  1.00
 Name: bmy_18890T0/1-256         Len:    259  Check:  32  Weight:  1.00
 Name: ENSTTRP00000005904/1-256  Len:    259  Check:  1866  Weight:  1.00

//


                          1                                                   50
ENSP00000339067/1-258     MTPPKLRASL SPSLLLLLSG CLLAAARREK GAASNVAEPV PGPTGGSSGR 
ENSBTAP00000051346/1-257  MSPLKRRASL S--LLLLLGG CLLAAAGRKQ GAAGVAAESA SGSAGGSSGR 
bmy_18890T0/1-256         MSPLRLRGSL SL-LLLLLGG CLLEGAGRNQ GAAGSAVESA PGPAGGSSGR 
ENSTTRP00000005904/1-256  MSPLRLRASL S--LLLLLGG YLLEGAGRNQ QAIGSAVESA LGPAGGSSGR 


                          51                                                 100
ENSP00000339067/1-258     FLSPEQHACS WQLLLPAPEA AAGSELALRC QSPDGARHQC AYRGHPERCA 
ENSBTAP00000051346/1-257  FVSPERHTCS WQLLPPAPGP EAGSELALRC QDPDGARHRC AYRGEPGRCA 
bmy_18890T0/1-256         FVSPERHACS WQLLPPAPGP AAGSELALRC QGPDGARHQC AYRGDPGRCP 
ENSTTRP00000005904/1-256  FVSPERHACS WQLLPPAPGP AAGSELALRC QGPDGARHQC AYRGEPGRCP 


                          101                                                150
ENSP00000339067/1-258     AYAARRAHFW KQVLGGLRKK RRPCHDPAPL QARLCAGKKG HGAELRLVPR 
ENSBTAP00000051346/1-257  VYAARRSHYW MQVLSGLRRK RRPCHDPAPL KARLCAGKKG RGAELRLVPQ 
bmy_18890T0/1-256         VYAARRSHYW KQVLGGLRRK RRPCHDPAPL KARLCAGKKG QGAELRLVPH 
ENSTTRP00000005904/1-256  VYAASPSHYW KQVLGGLRRK RRPCHDPAPL KARLCAGKKG QGAELRLVPH 


                          151                                                200
ENSP00000339067/1-258     ASPPARP-TV AGFAGESKPR ARNRGRTRER ASGPAAGTPP PQSAPPKENP 
ENSBTAP00000051346/1-257  ALPIVSPKAA AGLTRDPKPR ARSRGQPREP ALGRVTGAPP PPSAPPKGKP 
bmy_18890T0/1-256         ASPFVSP-TG AGFPRDPKLW ARSRGQPREA ARGPAAGALP PPNAPPKGKP 
ENSTTRP00000005904/1-256  ASPFVSP-TG AGFPRDPKLR ARSRGQPRET ARSPTVGAPP PSNAPPKGKP 


                          201                                                250
ENSP00000339067/1-258     SERKTNEGKR KAALVPNEER PMGTGPDPDG LDGNAELTET YCAEKWHSLC 
ENSBTAP00000051346/1-257  SEQKPKAGKR KAAWDPDEER PLGTGPDPDG LDENAKLTDT YCAEKWHSLC 
bmy_18890T0/1-256         FE-KTKGGKR KAAWDPDEGR PLGTRPDPDE LDENAKLTET YCAEKWHSLC 
ENSTTRP00000005904/1-256  SEKKTKGGKR KAAWNPDEER SLGTRPDPDE LDENTKLTET YCAEKWHSLC 


                          251                                                300
ENSP00000339067/1-258     NFFVNFWNG 
ENSBTAP00000051346/1-257  NFFVNFWNG 
bmy_18890T0/1-256         NFFVNFWNG 
ENSTTRP00000005904/1-256  NFFVNFWNG