KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:01:00 2014 Check: 00 .. Name: ENSP00000219478/1-480 Len: 527 Check: 8175 Weight: 1.00 Name: ENSBTAP00000051389/1-460 Len: 527 Check: 8307 Weight: 1.00 Name: bmy_14664T0/1-500 Len: 527 Check: 9286 Weight: 1.00 Name: ENSTTRP00000005167/1-459 Len: 527 Check: 6753 Weight: 1.00 // 1 50 ENSP00000219478/1-480 MATVPGLQPL PTLEQDLEQE EILIVKVEED FCLEEEPSVE TEDPSPETFR ENSBTAP00000051389/1-460 MATSPGPQPL APLEQD--EG DILVVKVEDD CCWEEEPSLE AEDPSPETFR bmy_14664T0/1-500 MATSPGFQHP PPLEQD---- EILIVKVEED CCWEEEPSLE IEDPSPETFR ENSTTRP00000005167/1-459 MATSPGFQHP PPLEQD---- EILIVKVEED CCWEEEPSLE IEDPSPETFR 51 100 ENSP00000219478/1-480 QLFRLFCYQE VAGPREALSR LWELCCRWLR PELRTKEQIL ELLVLEQFLT ENSBTAP00000051389/1-460 QLFRLFCYQE VAGPREALSR LWELCCRWLR PELRTKEQIL ELLVLEQFLT bmy_14664T0/1-500 QLFRLFCYQE VAGPREALSR LWELCCRWLR PELRTKEQIL ELLVLEQFLT ENSTTRP00000005167/1-459 QLFRLFCYQE VAGPREALSR LWELCCRWLR PELRTKEQIL ELLVLEQFLT 101 150 ENSP00000219478/1-480 VLPGEIQARV REQQPESGEE AVVLVEGLQR KPRKHRQRGS ELLSDDEVPL ENSBTAP00000051389/1-460 VLPGEIQARV REQQPESGEE AVVLVEGLQR EPRKQRPRDP ELLPNDALSH bmy_14664T0/1-500 VLPGEIQARV REQQPESGEE AVVLVEGLQR EPRKQRQRDP EVLPDDALAH ENSTTRP00000005167/1-459 VLPGEIQARV REQQPESGEE AVVLVEGLQR EPRRQRQRDP EVVPDDALAH 151 200 ENSP00000219478/1-480 GIGGQFLKHQ AEAQPEDLSL EEEARFSSQQ PPAQLSHRPQ RGPLLWPERG ENSBTAP00000051389/1-460 GTEEWFSKHQ VEAQPEELSL GEGAQHSSQP PLAQLSHRPR GGPSLWPNRG bmy_14664T0/1-500 GTGEWFLKCQ VEAQPAELSL EEGAQHSSQQ PAAQLSHRPK RGPQLWPKTG ENSTTRP00000005167/1-459 GTGEWFLKCQ VEAQPGELSL EEGPQHSSQQ PPAQLSHRPK RGPQLWPKTG 201 250 ENSP00000219478/1-480 PPAPRHQEMA S-ASPFLSAW SQVPVNLEDV AVYLSGEEPR CMDPAQRDAP ENSBTAP00000051389/1-460 PAASQHQETA ALATSFLSAW SQVPVTLEDV AVYLSQEEWG CLDLAQQDHR bmy_14664T0/1-500 PAASQCQETA ALATSFLSAW SQVPVTLEDV AVYLSQEEWG CLDLAQQDHS ENSTTRP00000005167/1-459 PAASQCQETA ALATSFLSAW SQVPVTLEDV AVYLSQEEWG CLDLAQQDHS 251 300 ENSP00000219478/1-480 ----LENEG- ---------- ---------- ---------- -------PGI ENSBTAP00000051389/1-460 ----APPEE- ---------- ---------- ---------- -------RGR bmy_14664T0/1-500 CDMLLEDEGL PAPGPCLTAQ EGPGQGLRDP ACAASGLREV SGSAGSELGR ENSTTRP00000005167/1-459 CGRLQEDEE- ---------- ---------- ---------- -------LGR 301 350 ENSP00000219478/1-480 QLEDGGDGRE DAPLRMEWYR VLSARCQGPG HPLPGQRPAP VRGLVRPDQP ENSBTAP00000051389/1-460 RLEDGEDSGE DASLSTAWAQ ALPDLGPGPG ---------- ------QARP bmy_14664T0/1-500 QFEDGEYARA DASMRTRWGQ VLPGPGQGPG ---------- ------PTRP ENSTTRP00000005167/1-459 QFEDGEYARA DASVRTRWGQ ALPGLGQGPG ---------- ------PD-P 351 400 ENSP00000219478/1-480 RGGPPPGRRA SHGADKPYTC PECGKGFSKT SHLTKHQRTH TGERPYKCLV ENSBTAP00000051389/1-460 QR--PQDRVG LLGVRKPHTC PECGKAFRKT SHLTKHQRTH TGERPYQCQV bmy_14664T0/1-500 QR--PPDRGG PLGVRKPHTC PECGKAFSKT SHLTKHQRTH TGERPYQCQV ENSTTRP00000005167/1-459 SG--LQTEGG P-GVRKPHTC PECGKAFSKT SHLTKHQRTH TGERPYQCQV 401 450 ENSP00000219478/1-480 CGKGFSDRSN FSTHQRVHTG EKPYPCPECG KRFSQSSSLV IHRRTHSGER ENSBTAP00000051389/1-460 CGKRFGDRSN CSTHQRVHTG EKPYACAECG KRFSQSSSLV IHRRTHTGER bmy_14664T0/1-500 CGKRFGDRSN CSTHQRVHTG EKPYACAQCG KRFSQSSSLV IHRRTHTGER ENSTTRP00000005167/1-459 CGKRFGDRSN CSTHQRVHTG EKPYACTQCG KCFSQSSSLV IHRRTHTGER 451 500 ENSP00000219478/1-480 PYACTQCGKR FNNSSHFSAH RRTHTGEKPY TCPACGRGFR RGTDLHKHQR ENSBTAP00000051389/1-460 PYQCQLCGKR FNNSSHFSAH RRTHTGEKPH TCPACGRGFR RGTDLRKHQR bmy_14664T0/1-500 PYACTECGKR FNNSSHFSAH RRTHTGEKPH TCPACGRGFR RGTDLRKHQR ENSTTRP00000005167/1-459 PYACTECGKR FNNSSHFSAH RRTHTGEKPH TCPACGRGFR RGTDLRKHQR 501 550 ENSP00000219478/1-480 THMGAGSLPT LQP----VAP GGPGAKA ENSBTAP00000051389/1-460 TH--GGEQPP RRPPGLQDTP ---GAWA bmy_14664T0/1-500 TH--GGEQPL HRPQRLQDAP ---GAQA ENSTTRP00000005167/1-459 TH--GGAATS QTP----EAP GRLGARA