KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:00 2014 Check: 00 .. Name: ENSP00000246006/1-652 Len: 670 Check: 7752 Weight: 1.00 Name: ENSBTAP00000051405/1-661 Len: 670 Check: 3646 Weight: 1.00 Name: ENSTTRP00000003224/1-647 Len: 670 Check: 6228 Weight: 1.00 Name: bmy_15616T0/1-648 Len: 670 Check: 743 Weight: 1.00 Name: BACU014841/1-640 Len: 670 Check: 7275 Weight: 1.00 // 1 50 ENSP00000246006/1-652 ---------- -------MAT SMGLLLLLLL LLTQPGAGTG ADTEAVVCVG ENSBTAP00000051405/1-661 LSPPGRQPPT QRDTEATMAS SAGLLLLLLL LSIQSRAENT TDWEAVVCAG ENSTTRP00000003224/1-647 ---------- -------MAG STGLLLLLLV --VQPWAGAA AAQEAVVCAG bmy_15616T0/1-648 ---------- ------MMAG STGLLLLLLL --VEPWAGAA ADQEAVVCAG BACU014841/1-640 ---------- -------MAG STGLLLLLLL --VEPWAGAA ADQEAVVCAG 51 100 ENSP00000246006/1-652 TACYTAHSGK LSAAEAQNHC NQNGGNLATV KSKEEAQHVQ RVLAQLLRRE ENSBTAP00000051405/1-661 SACYTAHRHK LSAEDAQLHC SKKGGNLATV KSEEEAWHIQ GALTQLLLLG ENSTTRP00000003224/1-647 AACYTAHRVK LSADDAQLRC SKKGGNLATV KSEEEALHVQ GALAQLLPPG bmy_15616T0/1-648 AACYTAHRVK LSAEDAQLHC SKKGGNLATV KSEEEALHVQ GALAQLLPPG BACU014841/1-640 AACYTAHRVK LSAEDAQLHC SKKGGNLATV KSEEEALHVQ GALAQLLPPG 101 150 ENSP00000246006/1-652 AALTARMSKF WIGLQREKGK CLDPSLPLKG FSWVGGGEDT PYSNWHKELR ENSBTAP00000051405/1-661 PPLQER-SKF WIGLQREKGT CSDSSLPLKG FSWLGDGEDS QYNNWYKEVR ENSTTRP00000003224/1-647 APLTERMGRF WIGLQRDKGK CLDSSLPLKG FSWVGGGEDT SYTNWHKEAK bmy_15616T0/1-648 APLAERMGRF WIGLQRDKRK CLDSNLPLKG FSWVGGGEDT SYTNWHKEAK BACU014841/1-640 APLAERMGRF WIGLQRDKGK CLDSNLPLKG FSWVGGGEDT SYTNWHKEAK 151 200 ENSP00000246006/1-652 NSCISKRCVS LLLDLSQPLL PSRLPKWSEG PCGSPGSPGS NIEGFVCKFS ENSBTAP00000051405/1-661 STCTHRRCVS LILDLSVPGL ASGLSKWVDG PCGHSGFPGM NIEGFVCKFS ENSTTRP00000003224/1-647 NSCTSKRCVS LMLDLSAPAL ASRLSKWTEG PCGSSKFSGS SIEGFVCKFS bmy_15616T0/1-648 NSCTSKRCVS LMLDLSVPAL ASRLSKWTEG PCGSSRFSGS NIEGFVCKFS BACU014841/1-640 NSCTSKRCVS LMLDLSVPAL ASRLSKWTEG PCGSSRFSGS NIEGFVCKFS 201 250 ENSP00000246006/1-652 FKGMCRPLAL GGPGQVTYTT PFQTTSSSLE AVPFASAANV ACGEGDKDET ENSBTAP00000051405/1-661 FKGMCRPLTL GGPGQVNYTT PFQATSSSLQ AVPFASMATV ACEDG--NEG ENSTTRP00000003224/1-647 FKGMCWPLTL GGPGQVNYTT PFQATSSSLQ AVPFASMANV ACGDG--DES bmy_15616T0/1-648 FKGMCRPLTL GGPGQVNYTT PFQATSSSLQ AVPFASMANV ACGDA--DES BACU014841/1-640 FKGMCRPLTL GGPGQVNYTT PFQATSSSLQ AVPFASMANV ACGDA--DES 251 300 ENSP00000246006/1-652 QSHYFLCKEK APDVFDWGSS GPLCVSPKYG CNFNNGGCHQ DCFEGGDGSF ENSBTAP00000051405/1-661 RQHYFLCKEK APSEFDWDSS GPLCVSPKFG CDFNNGGCQQ DCFEGGDGSF ENSTTRP00000003224/1-647 WQHYFLCKEK APGVFDWDSS GPLCVSPKFS CDFNNGGCQQ DCFEGGEGSF bmy_15616T0/1-648 WQHYFLCKEK APDVFDWDSS GPLCVSPKFS CDFNNGGCQQ DCFEGGEGSF BACU014841/1-640 WQHYFLCKEK APDVFGWDSS GPLCVSPKFS CDFNNGGCQQ DCFEGGEGSF 301 350 ENSP00000246006/1-652 LCGCRPGFRL LDDLVTCASR NPCSSSPCRG GATCVLGPHG KNYTCRCPQG ENSBTAP00000051405/1-661 RCGCRPGFRL LDDLVSCASR NPCSSNPCGG EATCFPGSLG TDFTCHCPPG ENSTTRP00000003224/1-647 RCGCRPGFRL LDDLVTCASR NPCSSSPCGG GSTCVPGPLG KDFTCHCPPG bmy_15616T0/1-648 RCGCRPGFRL LDDLVTCAPR NPCSSSPCGG GSTCVPGPLG KDFTCHCPPG BACU014841/1-640 RCGCRPGFRL LDDLVTCAPR NPCSSSPCGG GSTCVPGPLG KDFTCHCPPG 351 400 ENSP00000246006/1-652 YQLDSSQLDC VDVDECQDSP CAQECVNTPG GFRCECWVGY EPGGPGEGAC ENSBTAP00000051405/1-661 YQLDSTQRDC VDVDECRDNP CAQDCVNTPG SFRCECWVGF EPGGPEEGAC ENSTTRP00000003224/1-647 YRLDSTQQDC VDMDECQDAP CAQECVNTLG GFRCECWVGY EPGGPGEGAC bmy_15616T0/1-648 YRLDSTQQDC VDMDECQHAP CAQECVNTLG GFRCECWVGY EPGGPGEVAC BACU014841/1-640 YQLDSTQQDC VDMDECQDGP CAQECVNTLG GFRCECWVGY EPGGPGEGAC 401 450 ENSP00000246006/1-652 QDVDECALGR SPCAQGCTNT DGSFHCSCEE GYVLAGEDGT QCQDVDECVG ENSBTAP00000051405/1-661 VDVDECAPGH SPCAQSCTNT EGSFYCSCEE GYELAEEDGT QCLDVDECEV ENSTTRP00000003224/1-647 VDVDECAPSH SPCAQGCTNT DGSFYCSCEE GYVLAGEDGT RCVDVDECAG bmy_15616T0/1-648 VDVDECAPSH SPCAQGCTNT DGSFYCSCEG GYVLAGEDGT RCVDVDECAG BACU014841/1-640 VDVDECAPSH SPCAQGCTNT DGSFYCSCEG GYVLAGEDGT RCVDVDECAG 451 500 ENSP00000246006/1-652 PGGPLCDSLC FNTQGSFHCG CLPGWVLAPN GVSCTMGPVS LGPPSGPPDE ENSBTAP00000051405/1-661 QQGGLCDSLC FNTEGSFRCG CLPGWELDPN GVSCTGGHTS LGPPTGFPLR ENSTTRP00000003224/1-647 PQGGLCDSLC FNTEGSFRCG CLPGWELSPD GVSCTGGLTS LGPTAGPPQG bmy_15616T0/1-648 PQGGLCDSLC FNTEGSFRCG CLPGWELSPD GVSCTGGLTS LGPPAGPPQG BACU014841/1-640 PQGGLCDSLC FNTEGSFRCG CLPGWELSPD GVSCTGGLTS LGPPAGPPQG 501 550 ENSP00000246006/1-652 EDKGEKEGST VPRAATASPT R-GPEGTPKA TPTTSRPSLS SDAPITSAPL ENSBTAP00000051405/1-661 EDTGNGEGKL ----QSSATV WDNPEGTSTV VPSNRRLSLP ARVFTSLPPS ENSTTRP00000003224/1-647 EDTGDGEGRL VSFAATSSPT RDSPEGASTV APTARRPSLP DSAPISLAPP bmy_15616T0/1-648 EDTRDGEGRL VSFSATSSPT RDSPEGTSTV APAARRPSLP DSVPISLAPP BACU014841/1-640 EDTGDGEGRL VSFSATSSPT RESPEGTSTV APAARRPSLP DSVPISLAPP 551 600 ENSP00000246006/1-652 KMLAPSGSPG VWREPSIHHA TAASGPQEPA GGDSSVATQN NDGTDGQKLL ENSBTAP00000051405/1-661 EMLAPSATPG VWMEPSTHYP TATTGHRESA GEDFT-AKQS EQGTDGQQLL ENSTTRP00000003224/1-647 DMLAPSGSPG VWMEASTHHP TATTGREASA GEDFT-AKQS DDGTDGQKLL bmy_15616T0/1-648 DMLAPSGSPG VWMEASTHHP TATTGREASA GEDFT-AQQS DDGTDGQKLL BACU014841/1-640 DVLAPSGSPG VWMEASTHHP TATTGREASA GEDFT-AQQS DDGTDGQKLL 601 650 ENSP00000246006/1-652 LFYILGTVVA ILLLLALALG LLVYRKRRAK REEKKEKKPQ NAADSYSWVP ENSBTAP00000051405/1-661 LFYILGTVVA ILLLLALALG LLVCRKRRAK KEE-KKQQPQ SAADSYAWVP ENSTTRP00000003224/1-647 LFYILGTVVA ILFLLALALG LLVYRKRRAK REE-KEKKPQ SAADSYAWVP bmy_15616T0/1-648 LFYILGTVVA ILLLLALALG LLVYRKRRAK REE-KEKKPQ SAADSYAWVP BACU014841/1-640 LFYILGTVVA ILLLLALALG LLVYRKRRAK REE-KEKKPQ SAADSYAWVP 651 700 ENSP00000246006/1-652 ERAESRAMEN QYSPTPGTDC ENSBTAP00000051405/1-661 ERAESRAMEN PYSPTPGTDC ENSTTRP00000003224/1-647 ERAESRATEN PYSPTPGTDC bmy_15616T0/1-648 ERAESRATEN PYSPTPGTDC BACU014841/1-640 ERVESRATEN PYR-------