KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:00 2014 Check: 00 .. Name: bmy_22536T0/1-189 Len: 286 Check: 2693 Weight: 1.00 Name: BACU014826/1-284 Len: 286 Check: 5908 Weight: 1.00 Name: ENSP00000366058/1-258 Len: 286 Check: 341 Weight: 1.00 Name: ENSTTRP00000002055/1-257 Len: 286 Check: 8138 Weight: 1.00 Name: ENSBTAP00000051406/1-258 Len: 286 Check: 2207 Weight: 1.00 // 1 50 bmy_22536T0/1-189 MAGVVEQKSG LVRSKLGEAG KRNGLINTRS LVAESRDGLV SVYPAPQYQS BACU014826/1-284 MAGVVEQKSG LVRSKLGEAG KRNGLINTRS LVAESRDGLV SVYPAPQYQS ENSP00000366058/1-258 MDGIIEQKSM LVHSKISDAG KRNGLINTRN LMAESRDGLV SVYPAPQYQS ENSTTRP00000002055/1-257 MAGVVEQKSG LVRGKLGEAG KRNGLINTRS LVSESRDGLV SVYPAPQYQS ENSBTAP00000051406/1-258 MAGVVEQKSG LVRDKLGEAS KRNGLINTRS LVAESRDGLV SVYPAPQYQS 51 100 bmy_22536T0/1-189 CRVVGNVAPA APDGSRNKPV QQLLDPNTLQ QSVESLYRPN IILYSEGVLH BACU014826/1-284 CRVVGNAAPA APDGSRNKPV QQLLDPNTLQ QSVESLYRPN IILYSEGMLH ENSP00000366058/1-258 HRVGASTVPA SLDSSRSEPM QQLLDPNTLQ QSVESRYRPN IILYSEGVLR ENSTTRP00000002055/1-257 CRMVGNAAPA APDGSRNKPV QQLLDPNTLQ QSVESLYRPN IILYSEGMLH ENSBTAP00000051406/1-258 CRVVGSVASA GPDGARNEPL QQLLDPSTLQ QSVESRYRPN LILYSESVLR 101 150 bmy_22536T0/1-189 PWGDSVAADC CETTFIEDRS PSKESLEYPD GKFLDLSPED IKIHTLSYDV BACU014826/1-284 PWGDSVAADC CETTFIEDRS PAKESLEYPD GKFLDLSPED IKIHTLSYDV ENSP00000366058/1-258 SWGDGVAADC CETTFIEDRS PTKDSLEYPD GKFIDLSADD IKIHTLSYDV ENSTTRP00000002055/1-257 PWGDSVAADC CETTFIEDRS PTKESLEYPD GKFLDLSPED IKIHTLSYDV ENSBTAP00000051406/1-258 PWGDGVAADC CETTFIEDRS PTKESLEYPD GKFIDLSPED IKIHTLSYDV 151 200 bmy_22536T0/1-189 EEEEEEFQEL EVRA------ ---------- ---------- --C------- BACU014826/1-284 EEEEEEFQEL ESDYSSDTES EDNFLVMPPR DHLGLSVFSM LCCFWPLGIA ENSP00000366058/1-258 -EEEEEFQEL ESDYSSDTES EDNFLMMPPR DHLGLSVFSM LCCFWPLGIA ENSTTRP00000002055/1-257 --EEEGFQEL ESDYSSDTES EDNFLVMPPR DHLGLSVFSM LCCFWPLGIA ENSBTAP00000051406/1-258 -EEEEEFQEL ESDYSSDTES EDNFLVMPPR DHLGLSVFSM LCCFWPLGIA 201 250 bmy_22536T0/1-189 ---------- ---------- --VCHGP--- ---------- ---------- BACU014826/1-284 AFYLSHEGRC SLFREMQVDI GVTCHLPTEA SLSSCTRVIS WEVRDRALPS ENSP00000366058/1-258 AFYLSHETNK A--------- --VAKGDLHQ ASTSSRRALF LAVLS----- ENSTTRP00000002055/1-257 AFYLSHETNK A--------- --VAKGDFHQ ASTSSRRALF LAVLS----- ENSBTAP00000051406/1-258 AFYLSHETNK A--------- --VAKGDFHQ ASTSSRRALF LAVLS----- 251 300 bmy_22536T0/1-189 ---SGAGCGA LGG------- -YECQAEVGA ------ BACU014826/1-284 RHFVAMGSGV SEGDGVLRPD LLAVGLAPGL SVEA-- ENSP00000366058/1-258 ---ITIGTGV YVG------- -VAVALIAYL SKNNHL ENSTTRP00000002055/1-257 ---ITIGTGI YVG------- -VAVALIAYL SKSNHL ENSBTAP00000051406/1-258 ---ITIGTGI YVG------- -VAVALIAYL SKSNHL