KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 18:01:07 2014  Check: 00 ..

 Name: ENSP00000418915/1-167     Len:    226  Check:  7269  Weight:  1.00
 Name: ENSBTAP00000051503/1-167  Len:    226  Check:  8822  Weight:  1.00
 Name: bmy_13116T0/1-215         Len:    226  Check:  6185  Weight:  1.00
 Name: ENSTTRP00000000147/1-86   Len:    226  Check:  6483  Weight:  1.00

//


                          1                                                   50
ENSP00000418915/1-167     MEPAAGSSME PSADWLATAA ARGRVEEVRA LLEAGALPNA PNSYGRRPIQ 
ENSBTAP00000051503/1-167  ---ALGSSME TSADLLAAAA ALGWAEEVRA LLEAGASANA PNRYGRSAIQ 
bmy_13116T0/1-215         --------ME TSADWLATAA ARGRADEVRA LLEAGAPAHA PNRYGRSPIQ 
ENSTTRP00000000147/1-86   ---------- ---------- ---------- ---------- ---------- 


                          51                                                 100
ENSP00000418915/1-167     VMMMGSARVA ELLLLHGAEP NCADPATLTR PVHDAAREGF LDTLVVLHRA 
ENSBTAP00000051503/1-167  VMMMGSARVA ELLLLHGADP NCADPATLTR PVHDAAREGF LDTLVALHRA 
bmy_13116T0/1-215         VMMMGSARVA ELLLLHGADP NCADPATLTR PVHDAAREGF LDTLVALHRA 
ENSTTRP00000000147/1-86   VMMMGSARVA ELLLLHGADP NCADPATLTR PVHDAAREGF LDTLVALHRA 


                          101                                                150
ENSP00000418915/1-167     GARLDVRDAW GRLPVDLAEE LGHRDVARYL RAAAGGTRGS NHARIDAAEG 
ENSBTAP00000051503/1-167  GARLDVRDAW GRLPVDLAEE RGHRDVARYL RAAAEDTEGG SHASADSAEG 
bmy_13116T0/1-215         GARLDVRDAW GRLPVDLAEE RGHRDVARYL RAAAGDTEGG SHARADSAEG 
ENSTTRP00000000147/1-86   GARLDLRDAW GRLPVDLAEE RGHRDVARYL RAAEGD---- ---------- 


                          151                                                200
ENSP00000418915/1-167     PSEM---IGN H--------- ---------- ---------- LWVCRSRHA- 
ENSBTAP00000051503/1-167  PAEEKVGLGA P--------- ---------- ---------- QWVLRATGA- 
bmy_13116T0/1-215         PADL---LGS RNPAGCAAAL SLPSSGGSRA RERPGEPGEA QRVKRTRCEI 
ENSTTRP00000000147/1-86   ---------- ---------- ---------- ---------- ---------- 


                          201                                                250
ENSP00000418915/1-167     ---------- ---------- ------ 
ENSBTAP00000051503/1-167  ---------- ---------- ------ 
bmy_13116T0/1-215         GEARECGGGW EGPDSLDRPC AEDGGC 
ENSTTRP00000000147/1-86   ---------- ---------- ------