KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:08 2014 Check: 00 .. Name: bmy_10091T0/1-457 Len: 494 Check: 9808 Weight: 1.00 Name: ENSP00000340672/1-379 Len: 494 Check: 3067 Weight: 1.00 Name: ENSBTAP00000051543/1-379 Len: 494 Check: 4669 Weight: 1.00 Name: BACU009089/1-341 Len: 494 Check: 1471 Weight: 1.00 Name: ENSTTRP00000010139/1-361 Len: 494 Check: 7571 Weight: 1.00 // 1 50 bmy_10091T0/1-457 ---------- ---------- ---------- -------MAE GGSGDVDDVG ENSP00000340672/1-379 MGYARKVGWV TAGLVIGAGA CYCIYRLTRG RKQNKEKMAE GGSGDVDDAG ENSBTAP00000051543/1-379 MGYARKVGWV TAGLVIGAGA CYCIYRLTRG RKQNKEKMAE GGSGDVDDVG BACU009089/1-341 ---------- ---------- ---------- -------MAE GGSGDVDDVG ENSTTRP00000010139/1-361 ---------- --------GA CYCIYRLTRG RKQNKEKMAE GGSGDMDDVG 51 100 bmy_10091T0/1-457 DCPGARYNDW SDDDDDNSEN KGIVWYPPWA RIGTEAGTRA RARARARATR ENSP00000340672/1-379 DCSGARYNDW SDDDDDSNES KSIVWYPPWA RIGTEAGTRA RARARARATR ENSBTAP00000051543/1-379 DCPGARYNDW SDDDDDNSEN KGVVWYPPWA RIGTEAGTRA RARARARATR BACU009089/1-341 DCPGARYNDW SDDDDDNSEN KGIVWYPPWA RIGTEAGTRA RARARARATR ENSTTRP00000010139/1-361 DCPGARYNDW SDDDDDNSEN KGIVWYPPWA RIGTEAGTRA RARARARATR 101 150 bmy_10091T0/1-457 ARRAVQKRAS PNSDDTILSP QELQKVLCLV EMSEKPYILE AALIALGNNA ENSP00000340672/1-379 ARRAVQKRAS PNSDDTVLSP QELQKVLCLV EMSEKPYILE AALIALGNNA ENSBTAP00000051543/1-379 ARRAVQKRAS PNSDDTILSP QELQKVLCLV EMSEKPYILE AALIALGNNA BACU009089/1-341 ARRAVQKRAS PNSDDTILSP QELQKVLCLV EMSEKPYILE AALIALGNNA ENSTTRP00000010139/1-361 ARRAVQKRAS PNSDDTILSP QELQKVLCLV EMSEKPYILE AALIALGNNA 151 200 bmy_10091T0/1-457 AYAFNRDIIR DLGGLPIVAK ILNTRDPIVK EKALIVLNNL SVNAENQRRL ENSP00000340672/1-379 AYAFNRDIIR DLGGLPIVAK ILNTRDPIVK EKALIVLNNL SVNAENQRRL ENSBTAP00000051543/1-379 AYAFNRDIIR DLGGLPIVAK ILNTRDPIVK EKALIVLNNL SVNAENQRRL BACU009089/1-341 AYAFNRDIIR DLGGLPIVAK ILNTRDPIVK EKALIVLNNL SVNAENQRRL ENSTTRP00000010139/1-361 AYAFNRDIIR DLGGLPIVAK ILNTRDPIVK EKALIVLNNL SVNAENQRRL 201 250 bmy_10091T0/1-457 KIYMNQVCDD TITSRLNSSV QLAGLRLLTN MTVTNEYQHM LANSISDFFR ENSP00000340672/1-379 KVYMNQVCDD TITSRLNSSV QLAGLRLLTN MTVTNEYQHM LANSISDFFR ENSBTAP00000051543/1-379 KIYMNQVCDD TITSRLNSSV QLAGLRLLTN MTVTNEYQHM LANSISDFFR BACU009089/1-341 KIYMNQVCDD TITSRLNSSV QLAGLRLLTN MTVTNEYQHM LANSISDFFR ENSTTRP00000010139/1-361 KIYMNQVCDD TITSRLNSSV QLAGLRLLTN MTVTNEYQHM LANSISDFFR 251 300 bmy_10091T0/1-457 LFSAGNEETK FQVLKLLLNL AENPAMTREL LRAQVPSSLG SLFNKKENKE ENSP00000340672/1-379 LFSAGNEETK LQVLKLLLNL AENPAMTREL LRAQVPSSLG SLFNKKENKE ENSBTAP00000051543/1-379 LFSAGNEETK FQVLKLLLNL AENPAMTREL LRAQVPSSLG SLFNKKENKE BACU009089/1-341 LFX-GNEETK FQVLKLLLNL AEKAAMTREL LRAQVPSSLG SLFNKKENKE ENSTTRP00000010139/1-361 LFSAGNEETK FQVLKLLLNL AENPAMTREL LRAQVPSSLG SLFNKKENKE 301 350 bmy_10091T0/1-457 VILKLLVIFE NINDNFKWEE NEPTQNQFSE GSESDSDSVS VHPDSPSSES ENSP00000340672/1-379 VILKLLVIFE NINDNFKWEE NEPTQNQFGE GS-------- ---------- ENSBTAP00000051543/1-379 VILKLLVVFE NINDNFKWEE NESTQNQFSE GS-------- ---------- BACU009089/1-341 VILKLLVIFE NINDNFKWEE NEPTQNQFSE GS-------- ---------- ENSTTRP00000010139/1-361 VILKLLVIFE NINDNFKWEE NEPTQNQFSE VS-------- ---------- 351 400 bmy_10091T0/1-457 GTSARKACPP LAEAAAAAAA PSPGRKPSPN SSTSTLFFLP LPLPPVRDLV ENSP00000340672/1-379 ---------- ---------- ---------- -----LFFFL KEFQVCADKV ENSBTAP00000051543/1-379 ---------- ---------- ---------- -----LFFFL KEFQVCADKI BACU009089/1-341 ---------- ---------- ---------- -----LFFFL KEFQVCADKI ENSTTRP00000010139/1-361 ---------- ---------- ---------- -----LFFFL KEFQVCADKI 401 450 bmy_10091T0/1-457 PPLAPPLGTA PVADPALEDP EVPGASAAPV GAAAPEGTAA PEGAAAPEDA ENSP00000340672/1-379 ------LGIE SHHDFLVK-- ---------- ---------- ---------- ENSBTAP00000051543/1-379 ------LGLE SHQDFLVK-- ---------- ---------- ---------- BACU009089/1-341 ------LGIE SHHDFLVK-- ---------- ---------- ---------- ENSTTRP00000010139/1-361 ------LGIE SHHDFLVK-- ---------- ---------- ---------- 451 500 bmy_10091T0/1-457 VAPESAATSV GVADTVPGTG PDHYPSGYTA SIPNTAHDAA GVIP ENSP00000340672/1-379 ---------V KVGKFMAKLA EHMFPKSQE- ---------- ---- ENSBTAP00000051543/1-379 ---------V KVGKFVAKLA ENMFPKSQE- ---------- ---- BACU009089/1-341 ---------V KVGKFMAKLA EHMFPKSQE- ---------- ---- ENSTTRP00000010139/1-361 ---------V KVGKFMAKLA EHMFPKSQE- ---------- ----