KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:09 2014 Check: 00 .. Name: BACU016279/1-428 Len: 548 Check: 5671 Weight: 1.00 Name: ENSP00000362551/1-500 Len: 548 Check: 1871 Weight: 1.00 Name: ENSBTAP00000051553/1-510 Len: 548 Check: 8264 Weight: 1.00 Name: bmy_04052T0/1-546 Len: 548 Check: 3056 Weight: 1.00 Name: ENSTTRP00000009095/1-504 Len: 548 Check: 3311 Weight: 1.00 // 1 50 BACU016279/1-428 ---------- ---------- ---------- ---------- ---------- ENSP00000362551/1-500 ---------- ---------- ---------- ---------- ------MDSS ENSBTAP00000051553/1-510 ---------- ---------- ---------- --------RL RFMSVEMDSS bmy_04052T0/1-546 MVKSPGEPGR AAGSALLVAA TELLPHATAF LQSTSDPQRL RFMSVEMDSS ENSTTRP00000009095/1-504 ---------- ---------- ---------- ---------- --MSVEMDSS 51 100 BACU016279/1-428 ---------- ---------- ----MWLCSS RTW---SLFT PRGSVL---- ENSP00000362551/1-500 SFIQFDVPEY SSTVLSQLNE LRLQGKLCDI IVHIQGQPFR AHKAVLAASS ENSBTAP00000051553/1-510 SFIQFDVPEY SSTVLSQLNE LRLQGKLCDI IVHIQGQPFR AHKAVLAASS bmy_04052T0/1-546 SFIQFDVPEY SSTVLSQLNE LRLQGKLCDI IVHIQGQPFR AHKAVLAASS ENSTTRP00000009095/1-504 SFIQFDVPEY SSTVLSQLNE LRLQGKLCDI IVHIQGQPFR AHKAVLAASS 101 150 BACU016279/1-428 PW-------- ---------- --P-VLALLL SSV------- -LSDLASSLL ENSP00000362551/1-500 PYFRDHSALS TMSGLSISVI KNPNVFEQLL SFCYTGRMSL QLKDVVSFLT ENSBTAP00000051553/1-510 PYFRDHSALS TMSGLSISVI KNPNVFEQLL SFCYTGRMSL QLKDVVSFLT bmy_04052T0/1-546 PYFRDHSALS TMSGLSISVI KNPNVFEQLL SFCYTGRMSL QLKDVVSFLT ENSTTRP00000009095/1-504 PYFRDHSALS TMSGLSISVI KNPNVFEQLL SFCYTGRMSL QLKDVVSFLT 151 200 BACU016279/1-428 AQTWLP---- ----RYLVSP GFLATCVGDV DSVTVGAEET PESRNGVKDS ENSP00000362551/1-500 AASFLQMQCV IDKCTQILES IHSKISVGDV DSVTVGAEEN PESRNGVKDS ENSBTAP00000051553/1-510 AASFLQMQCV IDKCTQILES IHSKISVGDV DSVTVGAEET PESRNGVKDS bmy_04052T0/1-546 AASFLQMQCV IDKCTQILES IHSKISVGDV DSVTVGAEET PESRNGVKDS ENSTTRP00000009095/1-504 AASFLQMQCV IDKCTQILES IHSKISVGDV DSVTVGAEET PESRNGVKDS 201 250 BACU016279/1-428 SYFANPVEIS PPYCSQVRQP TTSSDLRMET TPSKALR-SR LQEEGHSDRG ENSP00000362551/1-500 SFFANPVEIS PPYCSQGRQP TASSDLRMET TPSKALR-SR LQEEGHSDRG ENSBTAP00000051553/1-510 SFFANPVEIS PPYCSQVRQP TTSSDLRMET TPSKALRSSR LQEEGHSDRG bmy_04052T0/1-546 SYFANPVEIS PPYCSQVRQP TTSSDLRMEA TPSKALR-SR FQEEGHSDRG ENSTTRP00000009095/1-504 SYFANPVEIS PPYCSQVRQP TTSSDLRMET TPSKALR-SR VQEEGHSDRG 251 300 BACU016279/1-428 SSGSVSEYEI QIEGDHEQGD LLGRESQITE VKVKMEKSDR PSCSDSSSLG ENSP00000362551/1-500 SSGSVSEYEI QIEGDHEQGD LLVRESQITE VKVKMEKSDR PSCSDSSSLG ENSBTAP00000051553/1-510 SSGSVSEYEI QIEGDHEQGD LLGRESQITE VKVKMEKSDR PSCSDSSSLG bmy_04052T0/1-546 SSGSVSEYEI QVEGDHEQGD LLGRESQITE VKVKVEKSDR PSCSDSSSLG ENSTTRP00000009095/1-504 SSGSVSEYEI QIEGDHEQGD LLGRESQITE VKVKMEKSDR PSCSDSSSLG 301 350 BACU016279/1-428 DDGYHTEMVD GEQVVAVNVG SYGSVLQHAY SYSQAASQPA -GVSEAFGSV ENSP00000362551/1-500 DDGYHTEMVD GEQVVAVNVG SYGSVLQHAY SYSQAASQPT -NVSEAFGSL ENSBTAP00000051553/1-510 DDGYHTEMVD GEQVVAVNVG SYGSVLQHAY SYCQAASQPA GGVSEAFGSL bmy_04052T0/1-546 DDGYHTEMVD GEQVVAVNVG SYGSVLQHAY SYSQAASQPA -GVSEAFGSL ENSTTRP00000009095/1-504 DDGYHTEMVD GEQVVAVNVG SYGSVLQHAY SYSQAASQPA -GVAEAFGSL 351 400 BACU016279/1-428 SNSSPSRSML SCFRGGRARQ KRALSVHLHS DLQGLVQGSD SEAMMNNPGF ENSP00000362551/1-500 SNSSPSRSML SCFRGGRARQ KRALSVHLHS DLQGLVQGSD SEAMMNNPGY ENSBTAP00000051553/1-510 SNSSPSRSML SCFRGGRARQ KRALSVHLHS DLQGLVQGSD SEAVVSNPGF bmy_04052T0/1-546 SNSSPSRSML SCFRGGRARQ KRALSVHLHS DLQGLVQGSD SEAMMNNPGF ENSTTRP00000009095/1-504 SNSSPSRSML SCFRGGRARQ KRALSVHLHS DLQGLVQGSD SEAMMNNPGF 401 450 BACU016279/1-428 ESSPRERSAR GHWYPYNERL ICIYCGKSFN QKGSLDRHMR LHMGITPFVC ENSP00000362551/1-500 ESSPRERSAR GHWYPYNERL ICIYCGKSFN QKGSLDRHMR LHMGITPFVC ENSBTAP00000051553/1-510 ESSPRERSAR GHWYPYNERL ICIYCGKSFN QKGSLDRHMR LHMGITPFVC bmy_04052T0/1-546 ESSPRERSAR GHWYPYNERL ICIYCGKSFN QKGSLDRHMR LHMGITPFVC ENSTTRP00000009095/1-504 ESSPRERSAR GHWYPYNERL ICIYCGKSFN QKGSLDRHMR LHMGITPFVC 451 500 BACU016279/1-428 KFCGKKYTRK DQLEYHIRGH TDDKPFRCEI CGKCFPFQGT LNQHLRKNHP ENSP00000362551/1-500 KFCGKKYTRK DQLEYHIRGH TDDKPFRCEI CGKCFPFQGT LNQHLRKNHP ENSBTAP00000051553/1-510 KFCGKKYTRK DQLEYHIRGH TDDKPFRCEI CGKCFPFQGT LNQHLRKNHP bmy_04052T0/1-546 KFCGKKYTRK DQLEYHIRGH TDDKPFRCEI CGKCFPFQGT LNQHLRKNHP ENSTTRP00000009095/1-504 KFCGKKYTRK DQLEYHIRGH TDDKPFRCEI CGKCFPFQGT LNQHLRKNHP 501 550 BACU016279/1-428 GIAEVRSRIE SPERTDVYVE QKLENDASAS EMALDSRMEI HTVSDAPD ENSP00000362551/1-500 GVAEVRSRIE SPERTDVYVE QKLENDASAS EMGLDSRMEI HTVSDAPD ENSBTAP00000051553/1-510 GVAEVRSRME SPERTDVYAE QKLENDASAS EMALDSRMEI HTVSDAPD bmy_04052T0/1-546 GIAEVRSRIE SPERTDVYVE QKLENDASAS EMALDSRMEI HTVSDAPD ENSTTRP00000009095/1-504 GIAEVRSRIE SPERTDVYVE QKLENDASAS EMALDSRMEI HTVSDAPD