KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:11 2014 Check: 00 .. Name: ENSTTRP00000002549/1-701 Len: 729 Check: 9299 Weight: 1.00 Name: bmy_12992T0/1-650 Len: 729 Check: 8168 Weight: 1.00 Name: ENSP00000261191/1-706 Len: 729 Check: 1980 Weight: 1.00 Name: BACU016361/1-706 Len: 729 Check: 1601 Weight: 1.00 Name: ENSBTAP00000051597/1-706 Len: 729 Check: 1805 Weight: 1.00 // 1 50 ENSTTRP00000002549/1-701 MKIFSESHKT VFVVDHCPYM AESCRQHVEF DMLVKNRTQG IIPLAPISKS bmy_12992T0/1-650 MKIFSESHKT VFVVDHCPYM AESCRQHVEF DMLVKNRTQG IIPLAPISKS ENSP00000261191/1-706 MKIFSESHKT VFVVDHCPYM AESCRQHVEF DMLVKNRTQG IIPLAPISKS BACU016361/1-706 MKIFSESHKT VFVVDHCPYM AESCRQHVEF DMLVKNRTQG IIPLAPISKS ENSBTAP00000051597/1-706 MKIFSESHKT VFVVDHCPYM AESCRQHVEF DMLVKNRTQG IIPLAPISKS 51 100 ENSTTRP00000002549/1-701 LWTCSVESSM EYCRIMYDIF PFKKLVNFIV SDSGAHVLNS WTQEDQNLQE bmy_12992T0/1-650 LWTCSVESSM EYCRIMYDIF PFKKLVNFIV SDSGAHVLNS WTQEDQNLQE ENSP00000261191/1-706 LWTCSVESSM EYCRIMYDIF PFKKLVNFIV SDSGAHVLNS WTQEDQNLQE BACU016361/1-706 LWTCSVESSM EYCRIMYDIF PFKKLVNFIV SDSGAHVLNS WTQEDQNLQE ENSBTAP00000051597/1-706 LWTCSVESSM EYCRIMYDIF PFKKLVNFIV SDSGAHVLNS WTQEDQNLQE 101 150 ENSTTRP00000002549/1-701 XMAALAAVG- PNPRADPECC SILHGLVGAV ETLCKITEYQ HEARTLLMEN bmy_12992T0/1-650 LVLSF----- ---------- ---------- --LC------ ---------- ENSP00000261191/1-706 LMAALAAVGP PNPRADPECC SILHGLVAAV ETLCKITEYQ HEARTLLMEN BACU016361/1-706 LMAALAAVGP PNPRADPECC SILHGLVAAV ETLCKITEYQ HEARTLLMEN ENSBTAP00000051597/1-706 LMAALAAVGP PNPRADPECC SILHGLVAAV ETLCKITEYQ HEARTLLMEN 151 200 ENSTTRP00000002549/1-701 AERVGNRGRI ICITNAKSDS HVRMLEDCVQ ETIHEHNKLA ANSDXXXXXX bmy_12992T0/1-650 ---------- ------HSDS HVRMLEDCVQ ETIHEHNKLA ANSDHLMQIQ ENSP00000261191/1-706 AERVGNRGRI ICITNAKSDS HVRMLEDCVQ ETIHEHNKLA ANSDHLMQIQ BACU016361/1-706 AERVGNRGRI ICITNAKSDS HVRMLEDCVQ ETIHEHNKLA ANSDHLMQIQ ENSBTAP00000051597/1-706 AERVGNRGRI ICITNAKSDS HVRMLEDCVQ ETIHEHNKLA ANSDHLMQIQ 201 250 ENSTTRP00000002549/1-701 XXXXXXXXXX XXXXXXXXXX XXXXXLSPVL TSEVHSVRAG RHLATKLNIL bmy_12992T0/1-650 KCELVLIHTY PVGEDSLVSD RPKKELSPXL TSEVHSVRAG RHLATKLNIL ENSP00000261191/1-706 KCELVLIHTY PVGEDSLVSD RSKKELSPVL TSEVHSVRAG RHLATKLNIL BACU016361/1-706 KCELVLIHTY PVGEDSLVSD RPKKELSPVL TSEVHSVRAG RHLATKLNIL ENSBTAP00000051597/1-706 KCELVLIHTY PVGEDSLVSD RTKKELSPVL TSEVHSVRAG RHLATKLNIL 251 300 ENSTTRP00000002549/1-701 VQQHFDLATT TIMXXXXXXX XX-----XXX XXXXXXXXXX XXXXXXXDNH bmy_12992T0/1-650 VQQHFDLAST TITNIPMKHT FS-------- ---------- -VFDQVSDNH ENSP00000261191/1-706 VQQHFDLAST TITNIPMKEE QHANTSANYD VELLHHKDAH VDFLKSGDSH BACU016361/1-706 VQQHFDLAST TITNIPMKEE QHANTSANYD VELLHHKDAH VDFLKSGDNH ENSBTAP00000051597/1-706 VQQHFDLAST TITNIPMKEE QHANTSANYD VELLHHKDAH VDFLKSGDNH 301 350 ENSTTRP00000002549/1-701 LSGSSREGSF KETITLKWCT PRTNNIELHY CTGAYRISPV DVNSRPSSCL bmy_12992T0/1-650 LSGSSREGSF KETITLKWCT PRTNNIELHY CTGAYRISPV DVNSRPSSCL ENSP00000261191/1-706 LGGGSREGSF KETITLKWCT PRTNNIELHY CTGAYRISPV DVNSRPSSCL BACU016361/1-706 LSGSSREGSF KETITLKWCT PRTNNIELHY CTGAYRISPV DVNSRPSSCL ENSBTAP00000051597/1-706 LSGSSREGSF KETITLKWCT PRTNNIELHY CTGAYRISPV DVNSRPSSCL 351 400 ENSTTRP00000002549/1-701 TNFLLNGRSV LLEQPRKSGS KVISHMLSSH GGEIFLHVLS SSRSILEDPP bmy_12992T0/1-650 TNFLLNGRSV LLEQPRKSGS KVISHMLSSH GGEIFLHVLS SSRSILEDPP ENSP00000261191/1-706 TNFLLNGRSV LLEQPRKSGS KVISHMLSSH GGEIFLHVLS SSRSILEDPP BACU016361/1-706 TNFLLNGRSV LLEQPRKSGS KVISHMLSSH GGEIFLHVLS SSRSILEDPP ENSBTAP00000051597/1-706 TNFLLNGRSV LLEQPRKSGS KVISHMLSSH GGEIFLHVLS SSRSILEDPP 401 450 ENSTTRP00000002549/1-701 SISEGCGGRV TDYRITDFGE FMRENRLTPF LDPRYKIDGS LEIPLERAKD bmy_12992T0/1-650 SISEGCGGRV TDYRITDFGE FMRENRLTPF LDPRYKIDGS LEIPLERAKD ENSP00000261191/1-706 SISEGCGGRV TDYRITDFGE FMRENRLTPF LDPRYKIDGS LEVPLERAKD BACU016361/1-706 SISEGCGGRV TDYRITDFGE FMRENRLTPF LDPRYKIDGS LEIPLERAKD ENSBTAP00000051597/1-706 SISEGCGGRV TDYRITDFGE FMRENRLTPF LDPRYKIDGS LEIPLERAKD 451 500 ENSTTRP00000002549/1-701 QLEKHTRYWP MIISQTTIFN MQAVVPLASV IVKESLTEED VLNCQKTIYN bmy_12992T0/1-650 QLEKHTRYWP MIISQTTIFN MQAVVPLASV IVKESLTEED VLNCQKTIYN ENSP00000261191/1-706 QLEKHTRYWP MIISQTTIFN MQAVVPLASV IVKESLTEED VLNCQKTIYN BACU016361/1-706 QLEKHTRYWP MIISQTTIFN MQAVVPLASV IVKESLTEED VLNCQKTIYN ENSBTAP00000051597/1-706 QLEKHTRYWP MIISQTTIFN MQAVVPLASV IVKESLTEED VLNCQKTIYN 501 550 ENSTTRP00000002549/1-701 LVDMERKNDP LPISTVGTRG KGPKXXXXXX XXXXXXXXXX XQAHINNSEK bmy_12992T0/1-650 LVDMERKNDP LPISTVGTRG KGPK-RDEQY RIMWNELETL VRAHINNSEK ENSP00000261191/1-706 LVDMERKNDP LPISTVGTRG KGPK-RDEQY RIMWNELETL VRAHINNSEK BACU016361/1-706 LVDMERKNDP LPISTVGTRG KGPK-RDEQY RIMWNELETL VRAHINNSEK ENSBTAP00000051597/1-706 LVDMERKNDP LPISTVGTRG KGPK-RDEQY RIMWNELETL VRAHINNSEK 551 600 ENSTTRP00000002549/1-701 HQRVLECLMA CRSKPPEEEE RKKRGRKRED KEDKSEKAVK DYEQEKSWQD bmy_12992T0/1-650 HQRVLECLMA CRSKPPEEEE RKKRGRKRED KEDKSEKAVK DYEQEKSWQD ENSP00000261191/1-706 HQRVLECLMA CRSKPPEEEE RKKRGRKRED KEDKSEKAVK DYEQEKSWQD BACU016361/1-706 HQRVLECLMA CRSKPPEEEE RKKRGRKRED KEDKSEKAVK DYEQEKSWQD ENSBTAP00000051597/1-706 HQRVLECLMA CRSKPPEEEE RKKRGRKRED KEDKSEKAVK DYEQEKSWQD 601 650 ENSTTRP00000002549/1-701 SERLKGILER GKEELAEAEI IKDSPDSPEP PNKKPLVEMD ETPPVEKSKG bmy_12992T0/1-650 SERLKGILER GKEELAETEI IKDSPDSPEP PNKKPLVEMD ETPPVEKSKG ENSP00000261191/1-706 SERLKGILER GKEELAEAEI IKDSPDSPEP PNKKPLVEMD ETPQVEKSKG BACU016361/1-706 SERLKGILER GKEELAEAEI IKDSPDSPEP PNKKPLVEMD ETPPVEKSKG ENSBTAP00000051597/1-706 SERLKGILER GKEELAEAEI IKDSPDSPEP PNKKPLVEMD ETPPVEKSKG 651 700 ENSTTRP00000002549/1-701 PVSLLSLWSN RINTANSRKH QEFAGRLNSV NNRAELYQHL KEENG----- bmy_12992T0/1-650 PVSLLSLWSN RINTANSRKH QEFAGRLNSV NNRAELYQHL KEENGFVFII ENSP00000261191/1-706 PVSLLSLWSN RINTANSRKH QEFAGRLNSV NNRAELYQHL KEENG----- BACU016361/1-706 PVSLLSLWSN RINTANSRKH QEFAGRLNSV NNRAELYQHL KEENG----- ENSBTAP00000051597/1-706 PVSLLSLWSN RINTANSRKH QEFAGRLNSV NNRAELYQHL KEENG----- 701 750 ENSTTRP00000002549/1-701 --------ME TTENGKASRQ --------- bmy_12992T0/1-650 VEISFVNCLI NGDNRKWKSQ PAVKSDLSN ENSP00000261191/1-706 --------ME TTENGKASRQ --------- BACU016361/1-706 --------ME TTENGKASRQ --------- ENSBTAP00000051597/1-706 --------ME TTENGKASRQ ---------