KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 18:01:11 2014  Check: 00 ..

 Name: ENSP00000418018/1-208     Len:    208  Check:  3974  Weight:  1.00
 Name: ENSBTAP00000051598/1-193  Len:    208  Check:  2824  Weight:  1.00
 Name: bmy_13110T0/1-127         Len:    208  Check:  9728  Weight:  1.00
 Name: BACU006624/1-193          Len:    208  Check:  607  Weight:  1.00

//


                          1                                                   50
ENSP00000418018/1-208     MIIKHFFGTV LVLLASTTIF SLDLKLIIFQ QRQVNQESLK LLNKLQTLSI 
ENSBTAP00000051598/1-193  MINKAFFEIV LVLLASSTVC SQELKLVLCQ QRRVNQESLK LLNKLQTSSV 
bmy_13110T0/1-127         ---------- ---------- ---------- ---------- ---------- 
BACU006624/1-193          MINKPFFEIV LVLLASSSVC SRELKLVLFQ QKRVNRESLK LLNKLQTSSI 


                          51                                                 100
ENSP00000418018/1-208     QQCLPHRKNF LLPQKSLSPQ QYQKGHTLAI LHEMLQQIFS LFRANISLDG 
ENSBTAP00000051598/1-193  QQCLPHRKHF LLPQKSVNPH QYQKGQVLAI LHEMLQQIFS LFRAIVSLDG 
bmy_13110T0/1-127         ---------- ------MNPH QYQKGQALAI LHEMLQQIFN LFRAIISLNG 
BACU006624/1-193          QQCLPHWKNF LLPQKSMNPH QYQKGQALAI LHEMLQQIFN LFRAIISLNG 


                          101                                                150
ENSP00000418018/1-208     WEENHTEKFL IQLHQQLEYL EALMGLEAEK LSGTLGSDNL RLQVKMYFRR 
ENSBTAP00000051598/1-193  WEESHTEKFL VELHQQLEYL EALMRLQAKQ KSDTLGSENL RLQVKMYFQR 
bmy_13110T0/1-127         WEESHMEKFL IELHQQLKYL EALTRLQAEQ KRDTLGSENL RLQVKIYFQR 
BACU006624/1-193          WEETHMEKFL IELHQQLKYL EALMRLQAEQ KRDTLGSENL RLQVKIYFQR 


                          151                                                200
ENSP00000418018/1-208     IHDYLENQDY STCAWAIVQV EISRCLFFVF SLTEKLSKQG RPLNDMKQEL 
ENSBTAP00000051598/1-193  IHDYLESQDY SSCAWTIVQV EINRCLFLVF RLTRKLSEQG MET------- 
bmy_13110T0/1-127         IRDYLENQDY STCAWTIVQV EINRCLFFVF RLTGKLSKQG MET------- 
BACU006624/1-193          IRDYLENQDY STCAWTIVQV EINRCLFFVF RLTGKLSKQG MET------- 


                          201                                                250
ENSP00000418018/1-208     TTEFRSPR 
ENSBTAP00000051598/1-193  -------- 
bmy_13110T0/1-127         -------- 
BACU006624/1-193          --------