KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:01:11 2014 Check: 00 .. Name: bmy_05727T0/1-280 Len: 391 Check: 3632 Weight: 1.00 Name: ENSBTAP00000051611/1-358 Len: 391 Check: 455 Weight: 1.00 Name: BACU003451/1-380 Len: 391 Check: 3131 Weight: 1.00 Name: ENSTTRP00000010220/1-356 Len: 391 Check: 7331 Weight: 1.00 // 1 50 bmy_05727T0/1-280 MM-------- ---------- -GCFDFHLDI LH-------- ---------F ENSBTAP00000051611/1-358 ---------- ---------- ----SFLFPL PSSL------ ---FFSAIQW BACU003451/1-380 MA-------- ---ILFFEDD EASRHFFLPL VRQAVGWDLL LPSLFSAIQW ENSTTRP00000010220/1-356 AASALGVLAA LRWLLFFEDD EASRHFFLPL VRQAVGWDLL LPSLFPAIQW 51 100 bmy_05727T0/1-280 LIFLHCQLHL V--------- ---PVQRAED ETPPEWTEHS SA-------- ENSBTAP00000051611/1-358 IQFVMATLSV IGSSSLVAYA IFQNIQKSPE RRPLFYLSFS DLLLGIYWLT BACU003451/1-380 IQFVMATLSV IGSSSLIAYA VFQNIQKSPE IRPLVYLSFS DLLLGIYWLI ENSTTRP00000010220/1-356 IQFVMATLSV IGSSSLIAYA VFQNIQKSPE IRPLVYLSFS DLLLGIYWLI 101 150 bmy_05727T0/1-280 -----GQSA- ---------- ---------- ---------- ---------- ENSBTAP00000051611/1-358 EALLYGTSTA SKDIVCYNLQ VVGQVLYISS FFYTINYIWY LYKELRMKPS BACU003451/1-380 EALLYGTSAA NKDIVCYNLQ AVGQIFYISS FFYTVNYIWY LYKELRMKPH ENSTTRP00000010220/1-356 EALLYGTSAA NKDIVCYNLQ AVGQ------ ---------- ---------- 151 200 bmy_05727T0/1-280 ---------V IGYTCRVSQT AIILSSLIPL LLMIPVFCLG NASECFRNFS ENSBTAP00000051611/1-358 QSAQRTFSLV IDYTCRIGQI AIILSSLIPL LLMVPVFCLG NVSECFRNFS BACU003451/1-380 QSGQSTVPLV IGYTCRVSQT AIILSSLIPL LLMIPVFCLG NASECFRNFS ENSTTRP00000010220/1-356 ---------V IGYTCRVSQI AIILSSLIPL LLMIPVFCLG NASECFRNFS 201 250 bmy_05727T0/1-280 QSHRCILMYS PPTAMAKVLP SANTSVCSTL YFYGLIIFLA SFLLSLLTIV ENSBTAP00000051611/1-358 QSHRCILIYS PPPAMAELLP SANTSVCSTL YFYGLIIFLA SFVLSFFTIV BACU003451/1-380 QSHRCILMYS PPTAMAKVLP SANTSVCSTL YFYGLIIFLA SFLLSLLTIV ENSTTRP00000010220/1-356 QSHRCILMYS TPTSMAKVLP SANISVCSTL YFYGLIIFLA SFLLSLLTIV 251 300 bmy_05727T0/1-280 VLLIQAQTLY KKFLKSTGFL GSEQWAVIHI VEQRVRFYPV AFFCCWGPAV ENSBTAP00000051611/1-358 VLLIQAQILY KKFLKSTGFL GSEQWAVIHI MEQRVRFYPV AFFCCWSPVV BACU003451/1-380 VLLIQAQTLY KKFLKSTGFL GSEQWAVIHI VEQRVRFYPV AFFCCWGPAV ENSTTRP00000010220/1-356 VLLIQAQTLY KKFLKSTGFL GSEQWAVIHI VEQRVRFYPV AFFCCWGPAV 301 350 bmy_05727T0/1-280 ILMIIKMTKP QDTKLHMALY VLQALTASSQ GLLNCGVYGW TQYKFYQLKQ ENSBTAP00000051611/1-358 ILMIIKLTKL QDTRLHMALY VLQALTTSSQ GLLNCGVYGW TQYKFYQLKQ BACU003451/1-380 ILMIIKMTKP QDTKLHMALY VLQALTASSQ GLLNCGVYGW TQYKFYQLKQ ENSTTRP00000010220/1-356 ILMIIKMTKP QDTKLHMALY VLQALTASSQ GLLNCGVYSW TQYKFYQLKQ 351 400 bmy_05727T0/1-280 EARHDADTQT PLLCSQKRFY SRGLDPLEST IAFANSTSTI L ENSBTAP00000051611/1-358 EARRDADTQT PLLCSQKRFY CRGLDPLEST LAFATSTSTI L BACU003451/1-380 EARHDADTQT PLLCSQKRFY SRGLDPLEST IAFATSTSTI L ENSTTRP00000010220/1-356 EARHDADTQT PLLCSQKRFY SRGPDPLEST IAFATSTSTI L