KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:12 2014 Check: 00 .. Name: ENSP00000415299/1-402 Len: 498 Check: 1611 Weight: 1.00 Name: BACU019882/1-353 Len: 498 Check: 3884 Weight: 1.00 Name: ENSTTRP00000011319/1-334 Len: 498 Check: 2890 Weight: 1.00 Name: ENSBTAP00000051634/1-407 Len: 498 Check: 2870 Weight: 1.00 Name: bmy_09961T0/1-497 Len: 498 Check: 7205 Weight: 1.00 // 1 50 ENSP00000415299/1-402 MEAHEIIEEP HITMDAEKHP PSKDPSAEDL QENHISESFL KPSTSETPLE BACU019882/1-353 MEADKVTEEP HTTMDVEESL SSKDPSAEDS QEPPIPEIPL EP-------- ENSTTRP00000011319/1-334 MEADKVTEEP HTTMDAEESL SSKDPSAEDS QKPPIPEIPL EPALSETLLE ENSBTAP00000051634/1-407 MEADKVTEEP HTTLDAEESL SSKDPSPEDS QEPPIPESPL EPAVSETLLE bmy_09961T0/1-497 MEADKVTEEP HTTMDAEESL SSKDPSAEDS QEPPIPEIPL EPALXETLLE 51 100 ENSP00000415299/1-402 PHTSESPLVP SPSQIPLEAH SPETHQEPSI SET------- --PSETPTYE BACU019882/1-353 -LASESHMVP SISQIPLETH TSETPWEPSI SEIPLEHSAS EVPLETPTPE ENSTTRP00000011319/1-334 PLASESHMVP SISQISLETH TAETPLEASI SEI------- --PLETPTPE ENSBTAP00000051634/1-407 SLASESPVLP STSQTSLDIH TSEAPVEPST STTPLEHSAS EVPLETLTPE bmy_09961T0/1-497 PLASESHMVP SISQIPLETY TSETPLEPSI SEIPLEHSAS EVPLETPNPE 101 150 ENSP00000415299/1-402 ASLDSPISVV PEKHLTLPPQ SRDYVCLSSS DTLKEDLSSE SSSNEVPWTR BACU019882/1-353 TQLETHISKD PEKHLTFQTS SLSCVSVSSS DYLKEAF-SE SSSSEGSWTR ENSTTRP00000011319/1-334 TQLETHISKV PEKHLTFQTS SLSCVSVSSS DYLKEAF-SE SSSSEGSWTR ENSBTAP00000051634/1-407 TQLETHIPKV LDQQLAFQTS SLGH---ASP DNPEEDF-SE SSSSESSWAK bmy_09961T0/1-497 IQLETHISKV PEKHLTFQTS SLSCVSVSSS DYLKEAF-SE SSSSEGSWTR 151 200 ENSP00000415299/1-402 RSTHLSESES LPEHCLSGPS SQVQVDTTEK QEEEAGEVEK GVDASDSTAH BACU019882/1-353 RSIQTSESES VPKHSLSGLP AQVHLDTSAK DGEEEEEGEK GVAATDSTAH ENSTTRP00000011319/1-334 RSIQTSESES VPKHSLSGFP AQVHLDTSAK DGEEEEEGEK GVDATDSTTH ENSBTAP00000051634/1-407 RSIHTSEFEG FPRHSLSGSP SQVYLDTSTK VKEEEEEGEK EMDVADSNTH bmy_09961T0/1-497 RPIQTSESES VPKHSLSGLP AQVHLDTSAK DGEEEEEGEK GVAATDNTAH 201 250 ENSP00000415299/1-402 TAQPGHQL-- ---------- ---------- ---------- -------GNT BACU019882/1-353 AAQPEHQLDK KKGKKG---- ---------- ---------- -----VSRYT ENSTTRP00000011319/1-334 AAQPEHQL-- ---------- ---------- ---------- -------GYT ENSBTAP00000051634/1-407 AAQPEHRL-- ---------- ---------- ---------- -------GYT bmy_09961T0/1-497 AAQPEHQLDK KKGKKGEEEI ELLSDLAPSL SFRASSLPLN YSAPSSPGYT 251 300 ENSP00000415299/1-402 ARPVFPARQT ELVEVAKAMH REEFGAQVNN LFQWEKDAAL NAIQTGLYIG BACU019882/1-353 IHPVVPAEQA DLVEVTKAMH KGKFGAQVNY LFQWEKEAAL NAIQT----- ENSTTRP00000011319/1-334 VYPVVPAEQD --VEVTNAMH KGKFAG--DY LFQWEKEAAL NAIQTD---- ENSBTAP00000051634/1-407 IHPVVPAKQA DLVGVAKAMH REKFGTQVNY LFQWEKDAAL NAIQTGLYIG bmy_09961T0/1-497 IHPVVPAEQA DLVEVTKAMH KGKFGAQVNY LFQWEKEAAL NAIQTGLYIG 301 350 ENSP00000415299/1-402 WRCPHYLWDC FRIGDESRCF CGHLLREHRI ISDISVPCKV SQCRCFMFCF BACU019882/1-353 ---------- ---------- ------VQNS SSGILAPAHL -HCD-LKSAL ENSTTRP00000011319/1-334 ---------- ---------- -----RDQNS SSGILVPAHP -HCDCLKSAL ENSBTAP00000051634/1-407 WRCPHYLWDC FRIGDESKCF CGHLLREHQI ISDISVPCNM GQCRCLMFCF bmy_09961T0/1-497 WRCPHYLWDC FRIGDESKCF CGHLLRAHQI ISDISVPCNV GQCRCLMFCF 351 400 ENSP00000415299/1-402 IPSRPEEVGE FWLKRRATFD PKAWRAQCRC KHSHEEHAAT GPHPCRHHGC BACU019882/1-353 SPKLP----- ---------- -------CCN GALIPQAGSI KSEASKPKTT ENSTTRP00000011319/1-334 STKLP----- ---------- -------CCN GALIPQAGSI KSEASKPKAT ENSBTAP00000051634/1-407 IPSRPEEVGE FWLKRRATFD PRSWRAQCRC KHSHEDHTAT GSHSCRVKGC bmy_09961T0/1-497 IPSRPEEVGE FWLKRRATFD PRAWRAQCRC KHSHEDHAAT RSHSCRVKGC 401 450 ENSP00000415299/1-402 CCGCFESNFL CAACDRRWEE HETFFDTQKT RQRGGRPRGT DTVSNWHRPL BACU019882/1-353 PGYFFFLLFL ITQSLH---- ------TQVS ILAGAAPIIY GTVSGLGMS- ENSTTRP00000011319/1-334 SGQ------- -ADPKR---- ------PGVS ILAGAAPIIY GTVSGLRMS- ENSBTAP00000051634/1-407 CCSCFESNFL CAACDRRWEE HETFFETEET RRRGGRPHGT DTVDTWRRPL bmy_09961T0/1-497 WCNCFESNFL CAACDWCWEE HETFFETEET RQRGGRPHGA DYVTFAEMPT 451 500 ENSP00000415299/1-402 ---------- ---------- ---------- ---------- -------- BACU019882/1-353 ---------- ---------- ---------- ---------P SAFVDTC- ENSTTRP00000011319/1-334 ---------- ---------- ---------- ---------P SAFVDTC- ENSBTAP00000051634/1-407 ---------- ---------- ---------- ---------- -------- bmy_09961T0/1-497 LREAIINNSD FEALQEKGPS GHPSSHPSPP GLPSPCSVQP GPISDPCT