KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:01:13 2014 Check: 00 .. Name: ENSTTRP00000001451/1-401 Len: 440 Check: 4308 Weight: 1.00 Name: ENSBTAP00000051657/1-403 Len: 440 Check: 4539 Weight: 1.00 Name: bmy_01605T0/1-440 Len: 440 Check: 9883 Weight: 1.00 Name: BACU003330/1-403 Len: 440 Check: 1532 Weight: 1.00 // 1 50 ENSTTRP00000001451/1-401 ---------- ---------- ---------- -------MSG RVGDLSPRQK ENSBTAP00000051657/1-403 ---------- ---------- ---------- -------MSG RVGDLSPKQK bmy_01605T0/1-440 LAANRGPGKR LGLYSRGGER VRAPSAAATA APGAWATMSG RVGDLSPRQK BACU003330/1-403 ---------- ---------- ---------- -------MSG RVGDLSPRQK 51 100 ENSTTRP00000001451/1-401 EALAKXXXXX XXXXXXXXXX DDYF-LRWLR ARSFDLQKSE AMLRKHVEVR ENSBTAP00000051657/1-403 EALAKFRENV QDVLPALPNP DDYFLLRWLR ARNFNLQKSE AMLRKHVEFR bmy_01605T0/1-440 EALAKFRENV QDVLPTLPNP DDYFLLRWLR ARSFDLQKSE AMLRKHVEVR BACU003330/1-403 EALAKFRENV QDVLPTLPNP DDYFLLRWLR ARSFDLQKSE AMLRKHVEVR 101 150 ENSTTRP00000001451/1-401 KQKDIDNIMS WQPPEVVQQY LSGGMCGYDL DGCPIWYDII GPLDAKGLLL ENSBTAP00000051657/1-403 KQKDIDNIMS WQPPEVVQQY LSGGMCGYDL EGSPIWYDII GPLDAKGLLL bmy_01605T0/1-440 KQKDIDNIMS WQPPEVVQQY LSGGMCGYDL DGCPIWYDII GPLDAKGLLL BACU003330/1-403 KQKDIDNIMS WQPPEVVQQY LSGGMCGYDL DGCPIWYDII GPLDAKGLLL 151 200 ENSTTRP00000001451/1-401 SATKQDLVKT KMRDCELLLR ECACQTEKXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000051657/1-403 SASKQDLFKT KMRDCELLLQ ECVRQTEKMG KKIEATTLIY DCEGLGLKHL bmy_01605T0/1-440 SATKQDLVKT KMRDCELLLR ECACQTEKTG KKIETITLIY DCEGLGLKHL BACU003330/1-403 SATKQDLVKT KMRDCELLLR ECACQTEKTG KKIETITLIY DCEGLGLKHL 201 250 ENSTTRP00000001451/1-401 XXXXXXXXXX FLCMFEEN-P ETLKRLFVIK APKLFPVAYN LIKPFLSEDT ENSBTAP00000051657/1-403 WKPAVEAYGE FLCMFEENYP ETLKRLFIVK APKLFPVAYN LVKPFLSEDT bmy_01605T0/1-440 WKPAVEAYGE FLCMFEENYP ETLKRLFVIK APKLFPVAYN LIKPFLSEDT BACU003330/1-403 WKPAVEAYGE FLCMFEENYP ETLKRLFVIK APKLFPVAYN LIKPFLSEDT 251 300 ENSTTRP00000001451/1-401 RKKIMVLGAN WKEVLLKYVS PDQLPVEYGG TMTDPDGDPK CKSKINYGGD ENSBTAP00000051657/1-403 RKKIQVLGAN WKEVLLKYIS PDQLPVEYGG TMTDPDGNPK CKSKINYGGD bmy_01605T0/1-440 RKKIMVLGAN WKEVLLKHVS PDQLPVEYGG TMTDPDGDPK CKSKINYGGD BACU003330/1-403 RKKIMVLGAN WKEVLLKHVS PDQLPVEYGG TMTDPDGDPK CKSKINYGGD 301 350 ENSTTRP00000001451/1-401 IPKKYYVRDQ LKQQYEHSVQ ISRGSSHQVE YEILFPGCVL RWQFMSDGSD ENSBTAP00000051657/1-403 IPKKYYVRDQ VKQQYEHSVQ ISRGSSHQVE YEILFPGCVL RWQFMSDGSD bmy_01605T0/1-440 IPKKYYVRDQ VKQQYEHSVQ ISRGSSHQVE YEILFPGCVL RWQFMSDGSD BACU003330/1-403 IPKKYYVRDQ VKQQYEHSVQ ISRGSSHQVE YEILFPGCVL RWQFMSDGSD 351 400 ENSTTRP00000001451/1-401 IGFGIFLKTK VGERQRAGEM TEVLSNQRYN AHLVPEDGTL TCSDPGIYVL ENSBTAP00000051657/1-403 IGFGIFLKTK VGERQRAGEM REVLPSQRYN AHLVPEDGSL TCSDPGIYVL bmy_01605T0/1-440 IGFGIFLKTK MGERQRAGEM TEVLANQRYN AHLVPEDGTL TCSDPGIYVL BACU003330/1-403 IGFGIFLKTK MGEQQRAGEM TEVLANQRYN AHLVPEDGTL TCSDPGIYVL 401 450 ENSTTRP00000001451/1-401 RFDNTYSFIH AKKVSFTVEV LLPDKASEEK MKQLGAVTPK ENSBTAP00000051657/1-403 RFDNTYSFIH AKKVSFTVEV LLPDKASEEK MQQLGAVTPK bmy_01605T0/1-440 RFDNTYSFIH AKKVSFTVEV LLPDKASEEK MKQLGAVTPK BACU003330/1-403 RFDNTYSFIH AKKVSFTVEV LLPDKASEEK MKQLGAVTPK