KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:13 2014 Check: 00 .. Name: BACU012447/1-503 Len: 627 Check: 7659 Weight: 1.00 Name: bmy_11839T0/1-521 Len: 627 Check: 2787 Weight: 1.00 Name: ENSP00000224337/1-456 Len: 627 Check: 3561 Weight: 1.00 Name: ENSTTRP00000005123/1-459 Len: 627 Check: 9087 Weight: 1.00 Name: ENSBTAP00000051686/1-459 Len: 627 Check: 9527 Weight: 1.00 // 1 50 BACU012447/1-503 -------FMF NFISYRQLQK MVHDIKNNEG GIMNKIKKLK VKAPPSVPRR bmy_11839T0/1-521 MESLPGPSST DPSEALQLRP LLEA--HTQG HIGSKLKTLD QHPPGN---R ENSP00000224337/1-456 MDKLNKITVP ASQKLRQLQK MVHDIKNNEG GIMNKIKKLK VKAPPSVPRR ENSTTRP00000005123/1-459 MDKLNKITVP ASQKLRQLQK MVHDIKNNEG GIMNKIKKLK VKAPPSVPRR ENSBTAP00000051686/1-459 MDKLNKITVP ASQKLRQLQK MVHDIKNNEG GIMNKIKKLK VKAPPSVPRR 51 100 BACU012447/1-503 DYASVLEANG FPNPLSQAGE CVDLGDADLQ RAEDRKGQHP PEVSKRVTTV bmy_11839T0/1-521 ENSA------ ---------- ---------- ---------- ---------- ENSP00000224337/1-456 DYAS------ ---------- ---------- ---------- ---------- ENSTTRP00000005123/1-459 DYAS------ ---------- ---------- ---------- ---------- ENSBTAP00000051686/1-459 DYAP------ ---------- ---------- ---------- ---------- 101 150 BACU012447/1-503 PLVECVRTKL ELHKEWRPGP PTDAERPADE EEQW-SDDFD SDYENPDEHS bmy_11839T0/1-521 ---------- ---------- ---------- --RWLEEDKD SDYENPDEHS ENSP00000224337/1-456 ---------- ---------- ----ESPADE EEQW-SDDFD SDYENPDEHS ENSTTRP00000005123/1-459 ---------- ---------- ----ERPADE EEQW-SDDFD SDYENPDEHS ENSBTAP00000051686/1-459 ---------- ---------- ----ESPADE EEQW-SDDFD SDYENPDEHS 151 200 BACU012447/1-503 DSEMYVLPAE EPGDDSYEPP PAEQETRPVH RALPFTRGEY VDNRSSQRQS bmy_11839T0/1-521 DSEMYVLPAE EAGDDSYEPP PAEQETRTVH RALPFTRGEY VDNRSSQRQS ENSP00000224337/1-456 DSEMYVMPAE ENADDSYEPP PVEQETRPVH PALPFARGEY IDNRSSQRHS ENSTTRP00000005123/1-459 DSEMYVLPAE EAGDDSYEPP PAEQETRIVH RALPFTRGEY VDNRSSQRQS ENSBTAP00000051686/1-459 DSEMYVLPAE EAGDDSYEPP PVEQETRTVH PALPFTRGEY VDNRSSQRQS 201 250 BACU012447/1-503 PPSSKTLPSK PNWPSAKARQ ATTLPAPTSL HKPQVPPRPK ELLEDEADYV bmy_11839T0/1-521 PPSSKTLPSK PNWPSAKARQ ATTLPAPTSL HKPQVPPRPK ELLEDEADYV ENSP00000224337/1-456 PPFSKTLPSK PSWPSEKARL TSTLPALTAL QKPQVPPKPK GLLEDEADYV ENSTTRP00000005123/1-459 PPFSKTLPSK PNWPSAKARQ AATLPAPTSL HKPQVPPRPK ELLEDEADYV ENSBTAP00000051686/1-459 PPFSKTLPSK PNWPSAKARL ATSLPANTSL HKPQVPPKPK ELLEDEADYV 251 300 BACU012447/1-503 VPVEDADENY IHPTEDSSLP SEK------- ---------- -----GKSRK bmy_11839T0/1-521 VPVEDADENY IHPTEDT--- ----PMVNRS TKPNNSSKPA SPPGTASGRK ENSP00000224337/1-456 VPVEDNDENY IHPTESSSPP PEKAPMVNRS TKPNSST-PA SPPGTASGRN ENSTTRP00000005123/1-459 VPVEDEDENY IHPTEDSSPP SEKAPMVNRS TKPNNFSKPA SPPGTASGRK ENSBTAP00000051686/1-459 VPVEDEDENY IHPTEDSSVP SEKAPMVNRS IKPNNSSKSA SPPGTAPGRK 301 350 BACU012447/1-503 SGAWDSKSTS SPAAPSPLPR AGKKTATPLK TAVPEVSLPS CVLLSSAFPD bmy_11839T0/1-521 SGAWDSKSTS SPAAPSPLPR AGKKTATPLK TT-PVVSQQN ASSVCEEKP- ENSP00000224337/1-456 SGAWETKS-P PPAAPSPLPR AGKKPTTPLK TT-PVASQQN ASSVCEEKP- ENSTTRP00000005123/1-459 SGAWDSKSTS SPAAPSPLPR AGKKTATPLK TT-PVVSQQN ASSVCEEKP- ENSBTAP00000051686/1-459 SGAWDSKSTS LPAAPSPLPR AGKKTAMPLK TT-PVASQQN ASSVCEEKP- 351 400 BACU012447/1-503 AFALLPFHSL QSSVPVEQGA WSD---NGAL GPIHQKPIPL PRFPEAGSPT bmy_11839T0/1-521 ----IPAERH RGSSHRQENM Q--------- -PIHQKPIPL PRFPEGGSPT ENSP00000224337/1-456 ----IPAERH RGSSHRQEAV QSPVF-PPAQ KQIHQKPIPL PRFTEGGNPT ENSTTRP00000005123/1-459 ----IPAERH RGSSHRQENM QSQVFPPPPQ KPIHQKPIPL PRFPEGGSPT ENSBTAP00000051686/1-459 ----IPAERH RGSSHRQENM QSPVFPPPAQ KAVHQKPIPL PRFPEGGSPT 401 450 BACU012447/1-503 VDGPLPSFSS NSNLSEQEAD VHCKPWYAGA CDRKSAEEAL YRSNKDGSFL bmy_11839T0/1-521 VDGPLPSFSS NSNLSEQEAD VHCKPWYAGA CDRKSAEEAL YRSNKDGSFL ENSP00000224337/1-456 VDGPLPSFSS NSTISEQEAG VLCKPWYAGA CDRKSAEEAL HRSNKDGSFL ENSTTRP00000005123/1-459 VDGPLPSFSS NSNLSEQEAD VHCKPWYAGA CDRKSAEEAL YRSNKDGSFL ENSBTAP00000051686/1-459 VDGPLPSFSS NSSLSEQEAD VHCKPWYAGA CDRKSAEEAL YRSNKDGSFL 451 500 BACU012447/1-503 IRKSSGHDSK QPYTLVVFFN KRVYNIPVRF IEATKQYALG RKKTGEEYFG bmy_11839T0/1-521 IRKSSGHDSK QPYTLVVFFN KRVYNIPVRF IEATKQYALG RKKTGEEYFG ENSP00000224337/1-456 IRKSSGHDSK QPYTLVVFFN KRVYNIPVRF IEATKQYALG RKKNGEEYFG ENSTTRP00000005123/1-459 IRKSSGHDSK QPYTLVVFFN KRVYNIPVRF IEATKQYALG RKKTGEEYFG ENSBTAP00000051686/1-459 IRKSSGHDSK QPYTLVVFFN KRVYNIPVRF IEATKQYALG RKKTGEEYFG 501 550 BACU012447/1-503 SVAEIIKNHQ HSPLVLIDSQ NNTKDSTRLK YAVNVS---- ---------- bmy_11839T0/1-521 SVAEIIKNHQ HSPLVLIDSQ NNTKDSTRLK YAVQEVNIIA SDILPTSTFE ENSP00000224337/1-456 SVAEIIRNHQ HSPLVLIDSQ NNTKDSTRLK YAVKVS---- ---------- ENSTTRP00000005123/1-459 SVAEIIKNHQ HSPLVLIDSQ NNTKDSTRLK YAVKVS---- ---------- ENSBTAP00000051686/1-459 SVAEMIKNHQ HNPLVLIDSQ NNTKDSTRLK YAVKVS---- ---------- 551 600 BACU012447/1-503 ---------- ---------- ---------- ---------- ---------- bmy_11839T0/1-521 EKVQKLHILD YESSSNKIED EEAVEVVVDF LIRSSHGHVL LPDLMNCVKY ENSP00000224337/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005123/1-459 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000051686/1-459 ---------- ---------- ---------- ---------- ---------- 601 650 BACU012447/1-503 ---------- ---------- ------- bmy_11839T0/1-521 FQSCKKITLY FQNKKIILLD KTKLLKI ENSP00000224337/1-456 ---------- ---------- ------- ENSTTRP00000005123/1-459 ---------- ---------- ------- ENSBTAP00000051686/1-459 ---------- ---------- -------