KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:15 2014 Check: 00 .. Name: ENSP00000331766/1-167 Len: 247 Check: 6807 Weight: 1.00 Name: bmy_05527T0/1-225 Len: 247 Check: 3654 Weight: 1.00 Name: ENSBTAP00000051719/1-215 Len: 247 Check: 238 Weight: 1.00 Name: BACU019750/1-166 Len: 247 Check: 8882 Weight: 1.00 Name: ENSTTRP00000010186/1-159 Len: 247 Check: 4237 Weight: 1.00 // 1 50 ENSP00000331766/1-167 MVSNFFH--- VIQVFEKSAT LISKTEHIGF VIYSWRKSTT HLGSRRKFAI bmy_05527T0/1-225 MHWCQIMFQI SAQLLSFCVT LGSLQTYISL FLIH-EMA-- ------GDIV ENSBTAP00000051719/1-215 MAGEIVYADI KHTSSEHSSS LQKSDSHHHG IFLK-VG--- ---------- BACU019750/1-166 MDSSFLL--- YHASVQKSIA LIDKAERIAL IFYS-LGKPT KLGRG-EEII ENSTTRP00000010186/1-159 MDSSFFH--- -IMHVFKSIA LIDKAEHIAL IFYS-QGKPT KLERGRKSSI 51 100 ENSP00000331766/1-167 SIYLSEVSLQ KYDCPFSGTS FVV----FSL FLICAMAGDV -VYADIKTVR bmy_05527T0/1-225 YADIKHSS-- -SGHSSSR-- -------QRY VIQFKSARHT EVNNESKEKY ENSBTAP00000051719/1-215 ---------- ---CAMIIIL LVIVIVLSML VIQFKSARQT EVDNELKKKY BACU019750/1-166 HLNLFHLQ-- -EVCKNMRLL QQTTTCDFSL FLIYAMAGDI -VYADIKH-- ENSTTRP00000010186/1-159 SIYLQEVQ-- -KYGSFSRLL LV-----FSL FLIYAMAGDI -IYADIKH-- 101 150 ENSP00000331766/1-167 TSPLELAFPL QRSVSFNFST VHKSCPAKDW KVHKGKCYWI AETK-KSWNK bmy_05527T0/1-225 CTGQNKSETS TSIVSFNSST ARKSCPSEDW KLHGGKCYWV AKSE-KSWHE ENSBTAP00000051719/1-215 CTEQSKSEAN NSIVSFNSST VHTSCPTKDW KLHGGKCYWV AEHENKSWNE BACU019750/1-166 -SSSEHSSSR QRSVSFNSST ARKSCPSEDW KLHGGKCYWV AESE-KSWNE ENSTTRP00000010186/1-159 -SSSEHSSSR QRSGCFNSST ASKSCPSEDW KLHGGKCYWV AKSE-KSWNE 151 200 ENSP00000331766/1-167 SQNDCAINNS YLMVIQDITA MV-------- ---------- --RFNI---- bmy_05527T0/1-225 SKKDCVMKNS HLLVIRDIID MTFLWQNLHA SAFYWVGLRI PPGEELWTWV ENSBTAP00000051719/1-215 SKNDCVTKKS HLMVVRDFTD TTFLWQNRHH S--FWVGLRI PPGGKLWTWL BACU019750/1-166 SKNDCVMKNS HLMVIRDIID MV-------- ---------- --RYKIWRL- ENSTTRP00000010186/1-159 SKNDCVMKNS HLMVIQDFID MV-------- ---------- --RNKIW--- 201 250 ENSP00000331766/1-167 ---------- ---------- ---------- ---------- ------- bmy_05527T0/1-225 DDSTFDPQLF PKKKNKPWTR SMKCVLVSHA EIAEESCEKL HQWICQL ENSBTAP00000051719/1-215 DNSTFDPQLF SNQRE---TR SMKCAWVSST EITKEDCQKS YPWICQL BACU019750/1-166 ---------- ---------- ---------- ---------- ------- ENSTTRP00000010186/1-159 ---------- ---------- ---------- ---------- -------