KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:01:16 2014 Check: 00 .. Name: BACU015243/1-731 Len: 783 Check: 8377 Weight: 1.00 Name: ENSP00000256389/1-776 Len: 783 Check: 4655 Weight: 1.00 Name: bmy_15807T0/1-628 Len: 783 Check: 3089 Weight: 1.00 Name: ENSBTAP00000051721/1-710 Len: 783 Check: 621 Weight: 1.00 // 1 50 BACU015243/1-731 ---------- ---------- ---------- ---------- ---------- ENSP00000256389/1-776 MVQLHQDTDP QIPKGQPCTL NSSEGGARPA VPHTLFSSAL DRWLHNDSFI bmy_15807T0/1-628 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000051721/1-710 ---------- ---------- ---------- ---------- ---------- 51 100 BACU015243/1-731 MAMDKALVRV RITLLLLWFG VFLLLSGSFY IGHSQHHGPP EVIIPLRITH ENSP00000256389/1-776 MAVGEPLVHI RVTLLLLWFG MFLSISGHSQ ARPSQYFTSP EVVIPLKVIS bmy_15807T0/1-628 MAVGEALVHI RVTLLLVSFG VSLFISDHSQ ARASQHFSSP ELVIPLKVTG ENSBTAP00000051721/1-710 MTVGEALVHF RVTPLLLWFG VCLFISGHSQ ARPSQHFSSP ELVIPLKVTG 101 150 BACU015243/1-731 TGRGMKPPGW LSYSLRFGGQ RHVLHMKVNK LLFSKHLPVF TYTNQHALLE ENSP00000256389/1-776 RGRGAKAPGW LSYSLRFGGQ RYIVHMRVNK LLFAAHLPVF TYTEQHALLQ bmy_15807T0/1-628 RGRNAKAPGW LSYSLRFGXQ RHIARMRVKK FLVSRHLPVF TYTDQRALRQ ENSBTAP00000051721/1-710 WGRNAKVPGW LSYSLRFGGQ RHIAHMKVKK FLVSRPLPVF TYTDQRSLQQ 151 200 BACU015243/1-731 DKPFIQNDCY YQGYVEGVPE SLVALSTCLM GLQGILQINN VVYEIKPKSL ENSP00000256389/1-776 DQPFIQDDCY YHGYVEGVPE SLVALSTCSG GFLGMLQIND LVYEIKPISV bmy_15807T0/1-628 DQPFVPDDCY YHGYVEGVPK SLVALSTCSG GFRGILQIND LAYEIEPVRF ENSBTAP00000051721/1-710 DQPFVPDDCY YHGYVEGAPK SLVALSTCSG GFRGILQIND LAYEIEPVRS 201 250 BACU015243/1-731 STSFEHLLYQ MEYGETEFPP RRCGLTDEEI ARQLKFQESV NYTLKQSGYE ENSP00000256389/1-776 SATFEHLVYK IDSDDTQFPP MRCGLTEEKI AHQMELQLSY NFTLKQSSFV bmy_15807T0/1-628 SATFEHLVYK IDSDDTQFPP MRCGLTEEEI ARQLELQELH NFTLMQSSYT ENSBTAP00000051721/1-710 SATFEHWVYR IDINDTQFPR MRCGLTEEEI ARQLEL---H NFTLKQSSYT 251 300 BACU015243/1-731 GWWTHRRFLE LAVVVDHNRY LHHQSNTSNV QYEVCLVVNE IGNFLQLLDV ENSP00000256389/1-776 GWWTHQRFVE LVVVVDNIRY LFSQSNATTV QHEVFNVVNI VDSFYHPLEV bmy_15807T0/1-628 GWWTHLRFLE LVVVVDNLRF IHSESNVSVV QREILDVVNV IGSLYHSLEL ENSBTAP00000051721/1-710 GWWTHLRFLE LVVIVDNLRY IFSGSNVSVV QNDIANAVNI INSLYRPLAV 301 350 BACU015243/1-731 NVVLTGIEIW SKENLLPTE- NIRNLLREFC QWKKKSFNTR LPHDIAHVFV ENSP00000256389/1-776 DVILTGIDIW TASNPLPTSG DLDNVLEDFS IWKNYNLNNR LQHDVAHLFI bmy_15807T0/1-628 DVILTGLEVW TEGNPVPID- NIDKLLEDFA VWKYFNLDDR LSHDAAHLFI ENSBTAP00000051721/1-710 DVILTGLEIW TEINQIATD- DIENMLEDFA VWKFFNLDKR LPHDAAHLFI 351 400 BACU015243/1-731 KENFGTLLGL AYVGTVCQQR YNCGVDSFTD DKLYDFAYIV SHEIGHNLGM ENSP00000256389/1-776 KDTQGMKLGV AYVKGICQNP FNTGVDVFED NRLVVFAITL GHELGHNLGM bmy_15807T0/1-628 KKSFGIKLGL AYVGGICQRP FNSGVNVFED ESLYAFATVV THELGHNLGM ENSBTAP00000051721/1-710 KKSFDPTLGV AFVAGVCQNP LNSGVMVFED ESLYAFGLTV THELGHNLGM 401 450 BACU015243/1-731 QHDENTCTCG AKACIMFPSK SLATRFSNCS YAAYW-NTVA KIKCLHISPN ENSP00000256389/1-776 QHDTQWCVCE LQWCIMHAYR KVTTKFSNCS YAQYWDSTIS SGLCIQPPPY bmy_15807T0/1-628 QHDTEWCVCE LQWCIMFPSR VVTNKFSNCS YAEYWDNLIS NGLCLYSPPH ENSBTAP00000051721/1-710 LHDTEFCVCE LQFCIMYPAR SVTSKFSNCS YAEFWDNVMR NGLCLFSPPN 451 500 BACU015243/1-731 PESIFTQARC GNSVVDEGEE CDCGPTHMCA KDPCCQPDCT LRLGAACAFG ENSP00000256389/1-776 PGNIFRLKYC GNLVVEEGEE CDCGTIRQCA KDPCCLLNCT LHPGAACAFG bmy_15807T0/1-628 PGNIFRLKYC GNLVVEEGEE CDCGTIEQCI NDPCCLLNCT LKPGAACAFG ENSBTAP00000051721/1-710 PENIFRIKYC GNLVVEEGEE CDCGTIGQCA RDPCCLPNCA LKPGAACAFG 501 550 BACU015243/1-731 LCCKNCDLMP AGYTCRKEEN ECDLPEWCDG TSYQCPEDVY MQDGTPCTGG ENSP00000256389/1-776 ICCKDCKFLP SGTLCRQQVG ECDLPEWCNG TSHQCPDDVY VQDGISCNVN bmy_15807T0/1-628 LCCKDCKIMS SGTLCRKXIS ECDLPEWCNG TSHQCPEDVY VQDGIPCSDG ENSBTAP00000051721/1-710 SCCKNCKVRS AGTLCRKQVN ECDLPEWCNG TSHQCPEDVF VQDGIPCSDS 551 600 BACU015243/1-731 GYCYEKRCNN RNEQCREIFG KEARSTNETC YREVNTRGDR FGNCGLTSTS ENSP00000256389/1-776 AFCYEKTCNN HDIQCKEIFG QDARSASQSC YQEINTQGNR FGHCGIVGTT bmy_15807T0/1-628 AYCYQKSCTN HDEQCREIFG KDARSAPQSC YKEINTQGNR FGHCGIKDTQ ENSBTAP00000051721/1-710 AYCYKKNCAN HDEQCREIFG KDARSASQSC YKEINTQGNR FGHCGISNTE 601 650 BACU015243/1-731 YIQCRIPDIL CGRIQCENVR EIPLLRDHST VHWTHINGVD CWGTDYHLGM ENSP00000256389/1-776 YVKCWTPDIM CGRVQCENVG VIPNLIEHST VQQFHLNDTT CWGTDYHLGM bmy_15807T0/1-628 YVKCASPDIL CGRVQCENVG VIPNLIEHST VHQLHFNDTT CWGTDYHIGM ENSBTAP00000051721/1-710 YMKCEVPDIL CGRVQCENVG VIPNLMEHST VHQFQVNDTT CWGTDYHVGM 651 700 BACU015243/1-731 TIPDIGEVKD GTECGTEHIC IGRKCIFRPS FESGCSPKIC NMNGVCNNRH ENSP00000256389/1-776 AIPDIGEVKD GTVCGPEKIC IRKKCASMVH LSQACQPKTC NMRGICNNKQ bmy_15807T0/1-628 SISDIGQKHK ---------- -------KKK ETETMEEKET E--------- ENSBTAP00000051721/1-710 SIPDIGQVKD GTMCGQKKIC VHSRCVSMVP EPQACQPKTC HMKGVCNNKQ 701 750 BACU015243/1-731 HCHCNSEWDP PKCLVKGRPT FTVDAKQPLS SELSPRFPTG SYTSRSQVLA ENSP00000256389/1-776 HCHCNHEWAP PYCKDKGYGG SADSGPPP-- ---KNNMEGL NVMGKLRYLS bmy_15807T0/1-628 ---------- ---EEEGD-- ---------- ---------- ---------- ENSBTAP00000051721/1-710 ECHCNPGWAP PYCKDEGSGG SNSSGPPG-- ---NPQGDT- --------HM 751 800 BACU015243/1-731 LFDGRARGIG YIKGFLLHFE EMEGGKTAGY EIL ENSP00000256389/1-776 LLCLLPLVAF LLFCLHVLFK KRTKSKEDEE G-- bmy_15807T0/1-628 ---------- ---------- ---------- --- ENSBTAP00000051721/1-710 LLWLIPLICL FVCCFLVLCK KRKEKKEP-- ---