KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:01:16 2014 Check: 00 .. Name: ENSTTRP00000001253/1-395 Len: 423 Check: 5887 Weight: 1.00 Name: ENSP00000351727/1-406 Len: 423 Check: 2582 Weight: 1.00 Name: bmy_04648T0/1-284 Len: 423 Check: 4184 Weight: 1.00 Name: ENSBTAP00000051759/1-415 Len: 423 Check: 354 Weight: 1.00 // 1 50 ENSTTRP00000001253/1-395 MTQPLDRKED PLNLGH---- ----GGASSA PLSTWSSCHR RLRGAPVYRQ ENSP00000351727/1-406 MTQTLDTRED PLNLGGGGGG GCGCGWAHSA SLSSWSSCHR RRPGAPAYNR bmy_04648T0/1-284 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000051759/1-415 MTQTLDTKED PLNLGG---- ----GWASSA PLRTWSFGPR RRRGAPVYRR 51 100 ENSTTRP00000001253/1-395 WHRYGPKAEY EPPRKQPKQQ HGSGPWFQPP ------VYSN WGRWGGPWHP ENSP00000351727/1-406 PHRYSPKTEY GPPRKQPKQQ HGPGFWFQPP ------VCSN WGCWGGPWRP bmy_04648T0/1-284 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000051759/1-415 RPRYGPKAEY EPPRKQAKQQ YGPGPWFQPP WRPYWAVYSN WGRWRGPWCP 101 150 ENSTTRP00000001253/1-395 PPEGFWKPPG RVQVIRVYGL HPFCLCCCSC WRSPWNPGWA RPPAR-KHWG ENSP00000351727/1-406 PPPGFWKFPC PVQVFRVYGL HPLCFCCCSC WSGSWNPGWV KPPGRKKRWG bmy_04648T0/1-284 ---------- -MQVIRVYGL HPFCLCCCSC WRGPWNPGWA RPPGRKKHWG ENSBTAP00000051759/1-415 PPAGFRKPPG RVQVIRVYGL HPLCLCCCSC CHGPWNPGWA RPPGRKKRWG 151 200 ENSTTRP00000001253/1-395 RRGRGLRRDP RRSFQRSPSE DLSTLLRPVD LCGWREPGLR APRN-TQFIM ENSP00000351727/1-406 RRGRGLRHHP RHSYPRSPPA DVSTLPRPVK LYEWREPGMR APPNTTQFIM bmy_04648T0/1-284 RRGRGLRRDP RRSFQRSPSE DLSTLLRPVN LSRWRVPGLR APRNTTQFIM ENSBTAP00000051759/1-415 RRGRGLRRHP RRSAQRSPPV DLSTLLRPVN LYGWRAPGMR APRNTTQFIM 201 250 ENSTTRP00000001253/1-395 NQIYEDMRQQ EXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000351727/1-406 NQIYEDMRQQ EKVERQQEAL RAQKATVSGE ASPARSSGND APPGGSKETW bmy_04648T0/1-284 NQIYEDMRQQ EELERQQEAL RAQQAQAGGT ASPGGSFGND APPSGGEEDT ENSBTAP00000051759/1-415 NQIYEDMRQQ EKLERQQEAL RAQQAQAAST ASPEGAFGND VPPSGGQEDE 251 300 ENSTTRP00000001253/1-395 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000351727/1-406 GLQETLYGFV QNPSLAFSPN PE-ENQSLAP LLVEEEEEKK NDDEEE--YD bmy_04648T0/1-284 ELRETLYSFG QNPSVAFSPD PDGENQSPSP QLVEEEEKND DEEEKE--CD ENSBTAP00000051759/1-415 ELQDTLYSFV RNPSLVFSPD PDEEKQTATS QLVEEEEEGE REEEEEEWCD 301 350 ENSTTRP00000001253/1-395 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXX--- ENSP00000351727/1-406 QEVCDAKEAS EEEEEVE--- --DEEEEVED EEEEEVEEAE YVEEGEEELE bmy_04648T0/1-284 EEECDGKGLE SEEEDAE--- -------AEA KGEEEVEESD SAEEGEE--- ENSBTAP00000051759/1-415 EEECDGKELE SQEEDEESEA KDEEDEESEA KDEEEGEEAD YMEEREEEDE 351 400 ENSTTRP00000001253/1-395 --------XX XXXXXXXXXX XXXXXXSLEM PLSTLVGAEE ETENFINCTY ENSP00000351727/1-406 E---EELEEE EEVLEENEQR GEEFHLPLEM PLSIFVEAEE KRENFISCTF bmy_04648T0/1-284 --------EE EEGLEE---- -EENRLPLEM PLSILAGAEE ERENLINCTY ENSBTAP00000051759/1-415 EDEAEEIAEE EEGLAEDEQT EEENHLPLEM PLSFLVGAEE ERENFMNCTY 401 450 ENSTTRP00000001253/1-395 -NPKQIIPKV PQEADLMVQD INC ENSP00000351727/1-406 LNPEQIIPKV PQESLFMAQD FNC bmy_04648T0/1-284 LNPKQIIPKV PQEALLMVQD INC ENSBTAP00000051759/1-415 LSPKQGIPKV AQEALFMVQD INC