KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:01:17 2014 Check: 00 .. Name: ENSTTRP00000011606/1-463 Len: 463 Check: 4965 Weight: 1.00 Name: ENSP00000259895/1-462 Len: 463 Check: 9372 Weight: 1.00 Name: bmy_16304T0/1-427 Len: 463 Check: 8437 Weight: 1.00 Name: ENSBTAP00000051764/1-463 Len: 463 Check: 7889 Weight: 1.00 // 1 50 ENSTTRP00000011606/1-463 MESTPSRGGL SRVHLQCRNL QEFLGSLSPG VLDRLYGHPA TCLAVFRELP ENSP00000259895/1-462 MESTPSR-GL NRVHLQCRNL QEFLGGLSPG VLDRLYGHPA TCLAVFRELP bmy_16304T0/1-427 MESTPSRGGL NRVHLQCRNL QEFLGSLSPG VLDRLYGHPA TCLAVFRELP ENSBTAP00000051764/1-463 MESTPSRGGL NRVHLQCRNL QEFLGGLSPG ILDRLYGHPA TCLAVFRELP 51 100 ENSTTRP00000011606/1-463 SLAKNWVMRM LFLEQPLPQA AVALWVKKEF SKAQEESTGL LSGLRIWHTQ ENSP00000259895/1-462 SLAKNWVMRM LFLEQPLPQA AVALWVKKEF SKAQEESTGL LSGLRIWHTQ bmy_16304T0/1-427 SLAKNWVMRM LFLEQPLPQA AVAL------ --AQEESTGL LSGLRIWHTQ ENSBTAP00000051764/1-463 SLAKNWVMRM LFLEQPLPQA AVALWVKKEF SKAQEESTGL LSGLRIWHTQ 101 150 ENSTTRP00000011606/1-463 LLPGGLQGLI LNPIFRQNLR IALLGGGKAW SDDTSQLGPD KHARDVPSLD ENSP00000259895/1-462 LLPGGLQGLI LNPIFRQNLR IALLGGGKAW SDDTSQLGPD KHARDVPSLD bmy_16304T0/1-427 LLPGGLQGLI LNPIFRQNLR IALLGGGKAW SDDTSQLGPD KHARDVPSLD ENSBTAP00000051764/1-463 LLPGGLQGLI LNPIFRQNLR IALLGGGKAW SDDTSQLGPD KHARDVLSLD 151 200 ENSTTRP00000011606/1-463 KYAEERWEVV LHFMVGSPSA AVSQDLAQLL SQAGLMKSAE PGEPPCITSA ENSP00000259895/1-462 KYAEERWEVV LHFMVGSPSA AVSQDLAQLL SQAGLMKSTE PGEPPCITSA bmy_16304T0/1-427 KYAEERWEVV LHFMVGSPSA AVSQDLAQLL SQAGLMKSAE PGEPPCITSA ENSBTAP00000051764/1-463 KYAEERWEVV LHFMVGSPSA AVSQDLAQLL SQAGLMKSAE PGEPPCITSA 201 250 ENSTTRP00000011606/1-463 GFQFLLLDTP AQLWYFMLQY LQTAQSRGMD LVEILSFLFQ LSFSTLGKDY ENSP00000259895/1-462 GFQFLLLDTP AQLWYFMLQY LQTAQSRGMD LVEILSFLFQ LSFSTLGKDY bmy_16304T0/1-427 GFQFLLLDTP AQLWYFMLQY LQTAQSRGMD LVEILSFLFQ LSFSTLG--- ENSBTAP00000051764/1-463 GFQFLLLDTP AQLWYFMLQY LQTAQSRGMD LVEILSFLFQ LSFSTLGKDY 251 300 ENSTTRP00000011606/1-463 SVEGMSDSLL NFLQHLREFG LVFQRKRKSR RYYPTRLAIN LSSGVSGAGG ENSP00000259895/1-462 SVEGMSDSLL NFLQHLREFG LVFQRKRKSR RYYPTRLAIN LSSGVSGAGG bmy_16304T0/1-427 ---------- ---------- -----KRKSR RYYPTRLAIN LSSGVSGAGG ENSBTAP00000051764/1-463 SVEGMSDSLL NFLQHLREFG LVFQRKRKSR RYYPTRLAIN LSSGVSGAGG 301 350 ENSTTRP00000011606/1-463 TAHHPGFIVV ETNYRLYAYT ESELQIALIA LFSEMLYRFP NMVVAQVTRE ENSP00000259895/1-462 TVHQPGFIVV ETNYRLYAYT ESELQIALIA LFSEMLYRFP NMVVAQVTRE bmy_16304T0/1-427 TAHQPGFIVV ETNYRLYAYT ESELQIALIA LFSEMLYRFP NMVVAQVTRE ENSBTAP00000051764/1-463 TAHQPGFIVV ETNYRLYAYT ESELQIALIA LFSEMLYRFP NMVVAQVTRE 351 400 ENSTTRP00000011606/1-463 SVQQAIASGI TAQQIIHFLR TRAHPVMLKQ TPVLPPTITY XXXXXXXXXX ENSP00000259895/1-462 SVQQAIASGI TAQQIIHFLR TRAHPVMLKQ TPVLPPTITD QIRLWELERD bmy_16304T0/1-427 SVQQAIASGI TAQQIIHFLR TRAHPVMLKQ TPVLPPTITD QIRLWELERD ENSBTAP00000051764/1-463 SVQQAIASGI TAQQIIHFLR TRAHPVMLKQ TPVLPPTITD QIRLWELERD 401 450 ENSTTRP00000011606/1-463 XXXXXXXVLY NQFLSQVDFE LLLAHARELG VLVFENSAKR LMVVTPAGHG ENSP00000259895/1-462 RLRFTEGVLY NQFLSQVDFE LLLAHARELG VLVFENSAKR LMVVTPAGHS bmy_16304T0/1-427 RLRFTEGVLY NQFLSQVDFE LLLAHARELG VLVFENSAKR LMVVTPAGHG ENSBTAP00000051764/1-463 RLRFTEGVLY NQFLSQVDFE LLLAHARELG VLMFENSAKR LMVVTPAGHS 451 500 ENSTTRP00000011606/1-463 DVKRFWKRQK HNS ENSP00000259895/1-462 DVKRFWKRQK HSS bmy_16304T0/1-427 DVKRFWKRQK HNS ENSBTAP00000051764/1-463 DVKRFWKRQK HNS