KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:18 2014 Check: 00 .. Name: ENSP00000403644/1-480 Len: 525 Check: 7512 Weight: 1.00 Name: ENSBTAP00000051814/1-380 Len: 525 Check: 1559 Weight: 1.00 Name: ENSTTRP00000008569/1-480 Len: 525 Check: 8753 Weight: 1.00 Name: bmy_12106T0/1-249 Len: 525 Check: 9490 Weight: 1.00 Name: BACU007396/1-525 Len: 525 Check: 6949 Weight: 1.00 // 1 50 ENSP00000403644/1-480 MNASEFRRRG KEMVDYMANY MEGIEGRQVY PDVEPGYLRP LIPAAAPQEP ENSBTAP00000051814/1-380 MNASEFRRRG KEMVDYVADY LEGIEGRQVF PDVDPGYLRP LIPTTAPQEP ENSTTRP00000008569/1-480 MNAHEFRRRG KEMVDYVADY LEGVEGRQVY PDVEPGYLRP LLPTAAPQEP bmy_12106T0/1-249 ---------- ---------- ---------- ---------- ---------- BACU007396/1-525 MNAHEFRRRG KEMVDYVADY LEGVEGRQVY PDVEPGYLRP LLPTAAPQEP 51 100 ENSP00000403644/1-480 DTFEDIINDV EKIIMPGVTH WHSPYFFAYF PTASSYPAML ADMLCGAIGC ENSBTAP00000051814/1-380 ETFEAIIEDI EKIIMPGVTH WHSPYFFAYF PTASSYPAML ADMLCGAIGC ENSTTRP00000008569/1-480 ETFEDIIKDV EKIIMPGVTH WHSPYFFAYF PTASSYPAML ADMLCGAIGC bmy_12106T0/1-249 ---------- ---------- ---------- ---------- ---------- BACU007396/1-525 ETFEDIIKDV EKIIMPGVTH WHSPYFFAYF PTASSYPAML ADMLCGAIGC 101 150 ENSP00000403644/1-480 IGFSWAASPA CTELETVMMD WLGKMLELPK AFLNEKAGEG GGVIQGSASE ENSBTAP00000051814/1-380 IGFSWAASPA CTELETVMMD WLGKMLQLPE AFLAGEAGEG GGVIQGTASE ENSTTRP00000008569/1-480 IGFSWAASPA CTELETVMMD WLGKMLQLPA VFLAGEAGEG GGVIQGSASE bmy_12106T0/1-249 ---------- ---------- ---------- ---------- ---------- BACU007396/1-525 IGFSWAASPA CTELETVMMD WLGKMLQLPG VFLAGEAGEG GGVIQGSASE 151 200 ENSP00000403644/1-480 ATLVALLAAR TKVIHRLQAA SPELTQAAIM EKLVAYSSDQ AHSSVERAGL ENSBTAP00000051814/1-380 ATLVALLAAR TKVTRHLQAA SPELTQAAIM EKLVAYASDQ AHSSVEKAGL ENSTTRP00000008569/1-480 ATLVALLAAR TKVTRRLQAA SPGLTQATIM EKLVAYASDQ AHSSVERAGL bmy_12106T0/1-249 ---------- ---------- ---------- ---------- ---------- BACU007396/1-525 ATLVALLAAR TKVTRCLQAA SPGLTQATIM EKLVAYASDQ AHSSVERAGL 201 250 ENSP00000403644/1-480 IGGVKLKAIP SDGNFAMRAS ALQEALERDK AAGLIPFFMV ATLGTTTCCS ENSBTAP00000051814/1-380 IGGVRLKAIP SDGKFAMRAS ALQEALERDK AAGLIPFFVV ATLGTTSCCS ENSTTRP00000008569/1-480 IGGVKLKAIP SDGKFAMRAS ALQEALERDK AEGLIPFFVV ATLGTTSCCS bmy_12106T0/1-249 ---------- ---------- ---------- --------VV ATLGTTSCCS BACU007396/1-525 IGGVKLKAIP SDGKFAMRAS ALQEALERDK AAGLIPFFVV ATLGTTSCCS 251 300 ENSP00000403644/1-480 FDNLLEVGPI CNKEDIWLHV DAAYAGSAFI CPEFRHLLNG VEFADSFNFN ENSBTAP00000051814/1-380 FDNLLEVGPI CHKEGLWLHV DAAYAGSAFI CPEFRHLLNG VEFADSFNFN ENSTTRP00000008569/1-480 FDNLLEVGPI CREEDVWLHV DAAYAGSAFI CPEFRHLLNG VEYAESFNFN bmy_12106T0/1-249 FDNLLEVGPI CHEEDVWLHV DAAYAGSAFI CPEFRHLLNG VEYADSFNFN BACU007396/1-525 FDNLLEVGPI CHEEDVWLHV DAAYAGSAFI CPEFRHLLNG VEYADSFNFN 301 350 ENSP00000403644/1-480 PHKWLLVNFD CSAMWVKKRT DLTGAFRLDP TYLKHSHQDS GLITDYRHWQ ENSBTAP00000051814/1-380 PHKWLLVNFD CSAMWVKKRT DLTGAFRLDP VYLRHSHQDS GLITDYRHWQ ENSTTRP00000008569/1-480 PHKWLLVNFD CSAMWVKKRT DLTGAFKLDP VYLKHSHQDS GLITDYRHWQ bmy_12106T0/1-249 PHKWLLVNFD CSAMWVKKRT DLTGAFKLDP VYLKHSHQDS GLITDYRHWQ BACU007396/1-525 PHKWLLVNFD CSAMWVKKRT DLTGAFKLDP VYLKHSHQDS GLITDYRHWQ 351 400 ENSP00000403644/1-480 IPLGRRFRSL KMWFVFRMYG VKGLQAYIRK HVQLSHEFES LVRQDPRFEI ENSBTAP00000051814/1-380 LPLGRRFRSL KMWFVFRMYG VKGLQAYIRK ---------- ---------- ENSTTRP00000008569/1-480 LPLGRRFRSL KMWFVFRMYG VKGLQAYIRK HVQLSHEFEA LVHQDPRFEI bmy_12106T0/1-249 LPLGRRFRSL KMWFVFRMYG VKGLQAYIRK HVQLSHEFEA LVHQDPRFEI BACU007396/1-525 LPLGRRFRSL KMWFVFRMYG VKGLQAYIRK HVQLSHEFEA LVHQDPRFEI 401 450 ENSP00000403644/1-480 CVEVILGLVC FRLKGSNKVN EALLQRINSA KKIHLVPCHL RDKFVLRFAI ENSBTAP00000051814/1-380 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008569/1-480 CAEVTLGLVC FRLKGSNRLN EALLERINSA RKIHLVPCHL RDQFVLRFAI bmy_12106T0/1-249 CAEVTLGLVC FRLKGSNKLN EALLERINSA RKIHLVPCHL RDQFVLRFAI BACU007396/1-525 CAEVTLGLVC FRLKGSNKLN EALLERINSA RKIHLVPCHL RGQFVLRFAV 451 500 ENSP00000403644/1-480 CSRTVESAHV QRAWEHIKEL AADVLRAERE ---------- ---------- ENSBTAP00000051814/1-380 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008569/1-480 CSRTVESAHV QLGLEHIRG- ATDLLGAQIE K--------- ---------- bmy_12106T0/1-249 CSRTVESAHV QLAWEHIRGL ATELLGAQKE EKAE-IKS-- ---------- BACU007396/1-525 CSRTVESAHV RLAWEHIRGL ATELLGAQRE EKAGYIKSSG HSSERKKELF 501 550 ENSP00000403644/1-480 ---------- ---------- ----- ENSBTAP00000051814/1-380 ---------- ---------- ----- ENSTTRP00000008569/1-480 ---------- ---------- ----- bmy_12106T0/1-249 ---------- ---------- ----- BACU007396/1-525 LFDKRYMLGE NKKDDNEYFG QVYPQ