KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:20 2014 Check: 00 .. Name: ENSP00000291823/1-616 Len: 750 Check: 2917 Weight: 1.00 Name: ENSBTAP00000051851/1-616 Len: 750 Check: 2375 Weight: 1.00 Name: bmy_11282T0/1-740 Len: 750 Check: 5240 Weight: 1.00 Name: ENSTTRP00000006720/1-610 Len: 750 Check: 1001 Weight: 1.00 Name: BACU001448/1-612 Len: 750 Check: 6903 Weight: 1.00 // 1 50 ENSP00000291823/1-616 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000051851/1-616 ---------- ---------- ---------- ---------- ---------- bmy_11282T0/1-740 PSRVPPLDGG GGITCHPTPH SSQGLRSPTT EPEPLSNAGT HSGGPGAPHP ENSTTRP00000006720/1-610 ---------- ---------- ---------- ---------- ---------- BACU001448/1-612 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000291823/1-616 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000051851/1-616 ---------- ---------- ---------- ---------- ---------- bmy_11282T0/1-740 KPGGLRGRGA PPGRLALRPR GLGIVREVGV NLAGRGTSAV LFPPLGGPRG ENSTTRP00000006720/1-610 ---------- ---------- ---------- ---------- ---------- BACU001448/1-612 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000291823/1-616 ---------- ---------- -------MST IQSETDCYDI IEVLGKGTFG ENSBTAP00000051851/1-616 ---------- ---------- -------MAT IQSETDCYDI IEVLGKGTFG bmy_11282T0/1-740 QRRGGRPRKQ SPWGGGGGRA VSGGRGTMAT IQSETDCYDI IEVLGKGTFG ENSTTRP00000006720/1-610 ---------- ---------- -------MAT IQSETDCYDI IEVLGKGTFG BACU001448/1-612 ---------- ---------- -------MAT IQSETDCYDI IEVLGKGTFG 151 200 ENSP00000291823/1-616 EVAKGWRRST GEMVAIKILK NDAYRNRIIK NELKLLHCMR GLDPEEAHVI ENSBTAP00000051851/1-616 EVAKGWRRST GEMVAIKILK NDAYRNRIIK NELKLLRCMR GLDPEEAHII bmy_11282T0/1-740 EVAKGWRRST GEMVAIKILK NDAYRNRIIK NELKLLRCMR GLDPEEAHVI ENSTTRP00000006720/1-610 EVAKGWRRST GEMVAIKILK NDAYRNRIIK NELKLLRCMR GLDPEEAHVI BACU001448/1-612 EVAKGWRRST GEMVAIKILK NDAYRNRIIK NELKLLRCMR GLDPEEAHVI 201 250 ENSP00000291823/1-616 RFLEFFHDAL KFYLVFELLE QNLFEFQKEN NFAPLPARHI RTVTLQVLTA ENSBTAP00000051851/1-616 RFLEFFHDAL KFYLVFELLE QNLFEFQKEN NFAPLPARHI RTVTLQVLRA bmy_11282T0/1-740 RFLEFFHDAL KFYLVFELLE QNLFEFQKEN NFAPLPARHI RTVTLQVLRA ENSTTRP00000006720/1-610 RFLEFFHDAL KFYLVFELLE QNLFEFQKEN NFEPLPARHI RTVTLQVLRA BACU001448/1-612 RFLEFFHDAL KFYLVFELLE QNLFEFQKEN NFAPLPARHI RTVTLQVLRA 251 300 ENSP00000291823/1-616 LARLKELAII HADLKPENIM LVDQTRCPFR VKVIDFGSAS IFSEVRYVKE ENSBTAP00000051851/1-616 LARLKELAII HADLKPENIM LVDQTRCPFR VKVIDFGSAS IFSEVRYVKE bmy_11282T0/1-740 LARLKELAII HADLKPENIM LVDQTRCPFR VKVIDFGSAS IFSEVRYVKE ENSTTRP00000006720/1-610 LARLKELAII HADLKPENIM LVDQTRCPFR VKVIDFGSAS IFSEVRYVKG BACU001448/1-612 LARLKELAII HADLKPENIM LVDQTRCPFR VKVIDFGSAS IFSEVRYVKE 301 350 ENSP00000291823/1-616 PYIQSRFYRA PEILLGLPFC EKVDVWSLGC VMAELHLGWP LYPGNNEYDQ ENSBTAP00000051851/1-616 PYIQSRFYRA PEILLGLPFC EKVDVWSLGC VMAELHLGWP LYPGNNEYDQ bmy_11282T0/1-740 PYIQSRFYRA PEILLGLPFC EKVDVWSLGC VMAELHLGWP LYPGNNEYDQ ENSTTRP00000006720/1-610 PYIQSRFYRA PEILLGLPFC EKVDVWSLGC VMAELHLGWP LYPGNNEYDQ BACU001448/1-612 PYIQSRFYRA PEILLGLPFC EKVDVWSLGC VMAELHLGWP LYPGNNEYDQ 351 400 ENSP00000291823/1-616 VRYICETQGL PKPHLLHAAC KAHHFFKRNP HPDAANPWQL KSSADYLAET ENSBTAP00000051851/1-616 VRYICETQGL PKPHLLHAAR KAHHFFKRNP HPDAANPWQL KSLADYLAET bmy_11282T0/1-740 VRYICETQGL PKPHVLHAAC KAHHFFKRNP HPDATNPWQL KSSADYLAET ENSTTRP00000006720/1-610 VRYICETQGL PKPHVLHAAC KAHHFFKRNP HPDAANPWQL KSSADYLAET BACU001448/1-612 VRYICETQGL PKPHMLHAAC KAHHFFKRNP HPDATNPWQL KSSADYLAET 401 450 ENSP00000291823/1-616 KVRPLERRKY MLKSLDQIET VNGGSVASRL TFPDREALAE HADLKSMVEL ENSBTAP00000051851/1-616 KVRPLERRKY MLKSLDQIET VNGVGAASRL TFPDREVLAE HADLKSMVEL bmy_11282T0/1-740 KVRPLERRKY MLKSLDQIEM VNGGGAARRL TFPDREALAE HADLKSMVEL ENSTTRP00000006720/1-610 KVRPLERRKY MLKSLDQIEV VNGSRAVRRL TFPDREALAE HADLKSMVEL BACU001448/1-612 KVRPLERRKY TLKSLDQIET VNGGGAARQL TFPDREALAE HADLKSMVEL 451 500 ENSP00000291823/1-616 IKRMLTWESH ERISPSAALR HPFVSMQQLR SAHETTHYYQ LSLRSYRLSL ENSBTAP00000051851/1-616 IKRMLTWESH ERISPSAALR HPFVSMQQLR STHETTRYYQ LSLRSCRLSL bmy_11282T0/1-740 IKRMLTWESH ERISPSAALR HPFVSMQQLR SAHETTHYYQ LSLHGCRLSL ENSTTRP00000006720/1-610 IKRMLTWESH ERISPSAALR HPFVSMQQLR SAHETTRYYQ LSLHSCRLSL BACU001448/1-612 IKRMLTWESH ERISPSAALR HPFVSMQQLR SAHETTRYYQ LSLHGCRLSL 501 550 ENSP00000291823/1-616 QVEGKPPTPV VAA-EDGTPY YCLAEEKEAA GMGSVAGSSP FFREEKAPGM ENSBTAP00000051851/1-616 QVEGKPPTSV LAAAEDGPPY YRLAEEEAAM GLGSTGGSGP FFREEKAPGM bmy_11282T0/1-740 QVEGKTPMSV VAAMEDGPPY YGPAEEEETV SL----GSGP LFREEKAPGM ENSTTRP00000006720/1-610 QVEGKTPMSA VDAAEDRPPY YGLTEEEETV GL----GSGP LFREEKAPGV BACU001448/1-612 QGEGKTPVSV VAAVEDGPPY HGPAEEEETV SL----GSGP LFREEKALGM 551 600 ENSP00000291823/1-616 QRAIDQLDDL SLQEAGHGLW GETCTNAVSD MMVPLKAAIT GHHVPDSGPE ENSBTAP00000051851/1-616 QRAIDQLDDL SLQEVGRGLW GETHADVVPD VLAPLKAAAV GRRLPESSPE bmy_11282T0/1-740 QKAIDQLDDL SLQEAGCGLW GETRTDIVPD VLAPLKAAAA GRWVPDSGPE ENSTTRP00000006720/1-610 QKAIDQLDDL SLQEAGSGLW GETRTDVVPD VLAPLKAAAA GRWVPDSGPE BACU001448/1-612 QKAIDQLDDL SLQEAGRGLW GETRTDVVPD VLAPLKAAAA GRWVPDSGPE 601 650 ENSP00000291823/1-616 PILAFYSSRL AGRHKARKPP AGSKSDSNFS NLIRLSQVSP EDDRPCRGSS ENSBTAP00000051851/1-616 PILAFYGTRL VGRHKVRKAP VGSKSDSNFS NLIRLSQASP EDDAPCRASG bmy_11282T0/1-740 PILAFYGSRL AGRHKARKPP AGSKSNSNFS NLIRLSQASP EEDAPCRGGG ENSTTRP00000006720/1-610 PILAFYGSRL AGHRKAHKPP TGSK--SNFS NLIRLSQASP EEDAPCRGGG BACU001448/1-612 PILAFYGSRL AGRHKARKPP AGSKSNSNFS NLIRLSQASP EEDAPCRGGG 651 700 ENSP00000291823/1-616 WEEGEHLGAS AEPLAILQRD EDGPNIDNMT MEAERPDPEL FDPSSCPGEW ENSBTAP00000051851/1-616 WAEGERLGAS AEPPVIPQRD GDGPDIKDMT MDAESPGPEL FDPNSCPGEW bmy_11282T0/1-740 WAEGEWRGAS VEPPAIPQRD GDGPDIKDMT VDAEAVGQ-- ---LSHPQED ENSTTRP00000006720/1-610 CAEGERRGAS AELPAIPQWD RDGPDIKDMT VDAERPGHEF FDLSSCPGEW BACU001448/1-612 WAEGEWRGAS VEPPAIPQRD GDGPDIKDMT VDAERPGPEF FDLSSCPGEW 701 750 ENSP00000291823/1-616 LSEPDCT--L ESVRGPRAQG LPPRRSHQHG PPRGATSFLQ H--VTGHH-- ENSBTAP00000051851/1-616 LSEPDWT--L EGLRGPRVQG LPPHHAHPHG PPR-ATSFLQ H--VGGHH-- bmy_11282T0/1-740 VTEPQQTHLQ DTLRSQHTAF KPPKWDEGSG CTK-SSSGID KDAVGITRSP ENSTTRP00000006720/1-610 LGQPDWT--L EGVGGPRAQG LPPRHTHPHG PPR-ATSFVQ H--VGGHH-- BACU001448/1-612 LGQPDWT--L EGVGGPQAQG LPPRHTHPHG PPR-ATSFLQ H--VGGHH--