KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:21 2014 Check: 00 .. Name: ENSBTAP00000051892/1-162 Len: 491 Check: 1543 Weight: 1.00 Name: ENSP00000343331/1-481 Len: 491 Check: 1225 Weight: 1.00 Name: bmy_20509T0/1-242 Len: 491 Check: 9204 Weight: 1.00 Name: BACU000078/1-385 Len: 491 Check: 5929 Weight: 1.00 Name: ENSTTRP00000007010/1-431 Len: 491 Check: 690 Weight: 1.00 // 1 50 ENSBTAP00000051892/1-162 ---------- --MSRIRPGP WE-------- ---------- -----KNKAP ENSP00000343331/1-481 MLLKCLHNNL CQKYSAHAFQ FS-------- -PRNVLWLLV VCLRSDNKRP bmy_20509T0/1-242 ---------- ----MFHC-- ---------- --------LV MTIAVENKGP BACU000078/1-385 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007010/1-431 MLLNCLHNNL CAGATLHCGA WASHFLLRSP GSRHVLWALV VFPEPESKGP 51 100 ENSBTAP00000051892/1-162 CLEFSHLSLK DSFRDLFNPQ MEISLMLYTR KNPTCAESLF EKNDSLNINF ENSP00000343331/1-481 CLEFSQLSVK DSFRDLFIPR IETILMMYTR NNLNCAEPLF EQNNSLNVNF bmy_20509T0/1-242 CLKFSRLSLK DSFRDLFNPK MEIFLILYTR NNPSCAESLF EQDNSLNVNF BACU000078/1-385 ---------- ---------- MEIFLILYTR NNPSCAESLF EQDNSVNVKF ENSTTRP00000007010/1-431 CLTFSHLSLK DSFRDLFNPK MEIFLILYTR NNPSCAESLF EQDNSLNVNF 101 150 ENSBTAP00000051892/1-162 NTSKKAVWLI HGYRPLGSTP SWLQNFVRIL LNQDDMNIIV VDWNRGATTF ENSP00000343331/1-481 NTQKKTVWLI HGYRPVGSIP LWLQNFVRIL LNEEDMNVIV VDWSRGATTF bmy_20509T0/1-242 NPRKKTVWLI HGYRPMGSTP PWLQNFVRIL LDQDDINIIV VDWNRGAATF BACU000078/1-385 NPRKKTVWLI HGYRPMGSIP PWLQNFVRIL LDQDDINIIV VDWNRGATTF ENSTTRP00000007010/1-431 NTRKKTVWLI HGYRPTGSTP PWLQNFVRIL LDQDDINIIV VDWNRGATTF 151 200 ENSBTAP00000051892/1-162 LYVRAVKNTR KVAVSLSRYI QNLL---VSL E---FYGLYM ------LYNK ENSP00000343331/1-481 IYNRAVKNTR KVAVSLSVHI KNLLKHGASL DNFHFIGVSL GAHISGFVGK bmy_20509T0/1-242 FYSRAVKNTR KVAVSLSRYI QNLLKHGASL DNFHFIGVSL GAHISGFVGK BACU000078/1-385 FYSRAVKNTR KVAVSLSRYI QNLLKHGASL DNFHFIGVSL GAHISGFVGK ENSTTRP00000007010/1-431 LYSRAVKNTR KVAVSLSRYI QNLLGHGASL DNFHFIGVSL GAHISGFVGK 201 250 ENSBTAP00000051892/1-162 WW-------- ---------- ---------- ---------- ---------- ENSP00000343331/1-481 IFHGQLGRIT GLDPAGPRFS RKPPYSRLDY TDAKFVDVIH SDSNGLGIQE bmy_20509T0/1-242 IFHGQVGRIT GLDPAGPQFS GKPSKSKLDY TDANIVDVIH TDTNG----N BACU000078/1-385 IFHGQVGRIT GLDPAGPQFS GKPSEGKLDY TDANIVDVIH TDTNGLGIKE ENSTTRP00000007010/1-431 IFHGQVGRIT GLDPAGPQFS GKPSNGKLDY TDAHIVDVIH TDTNGLGIKE 251 300 ENSBTAP00000051892/1-162 -------FYN TTKR------ ---------- ---------- ---------- ENSP00000343331/1-481 PLGHI-DFYP NGGNKQPGCP KSIFSGIQFI KCNHQRAVHL FMASLETNCN bmy_20509T0/1-242 NVGFIAELFE NGKG------ ---------- ---------- ---------- BACU000078/1-385 PLGHI-DFYP NGGKKQPGCP KSIFS----- ---------- ---------- ENSTTRP00000007010/1-431 PLRHI-DFYP NGGKKQPGCP KSIFSGLEFI KCDHQRAVYL FMAALETSCN 301 350 ENSBTAP00000051892/1-162 ---------- ---------- ---------- ---------- ---------- ENSP00000343331/1-481 FISFPCRSYK DYKTSLCVDC DCFKEKSCPR LGYQAKLFKG VLKERMEGRP bmy_20509T0/1-242 ---------- DVDTG----- ---------- ---------- ---------- BACU000078/1-385 ---------- DYKTGSCVDC ADFKEKSCPK LGYQTELWKD VLKERIENRT ENSTTRP00000007010/1-431 FISFPCHSYK DYKTGSCVDC ADFKEKSCPK LGYQTELWXX XXXXXXXXXX 351 400 ENSBTAP00000051892/1-162 ---------- ---------- ---------- ---------- ---------- ENSP00000343331/1-481 LRTTVFLDTS GTYPFCTYYF VLSIIVPDKT MMDGSFSFKL LNQLGMIEEP bmy_20509T0/1-242 ---------- ---------- ---------- ---------- -------EEE BACU000078/1-385 LRTTVFLDTV GRNPFCTYYF VLSITVLDKT MKDGYITFKL LNQLGMVEEP ENSTTRP00000007010/1-431 XXXXXXXXXX XXXXXXXYYF VLSIIVLDKT MKDGCITFKL LNQLGMVEEP 401 450 ENSBTAP00000051892/1-162 ---------- ---------- ---------- ---------- ---------- ENSP00000343331/1-481 RLYEKNKPFY KLQEVKILAQ FYNDFVNISS IGLTYFQSSN LQCSTCTYKI bmy_20509T0/1-242 NL-------- ---------- ---------- ---------- ---------- BACU000078/1-385 RLYKKNRLFC KHQEFKFLAQ FLNDVVNISS ISLAYFQSSN QQCSTCKYTI ENSTTRP00000007010/1-431 RLFE------ ---------- ---------- ---------- ---------- 451 500 ENSBTAP00000051892/1-162 ---------- ---------- ---------- ---------- - ENSP00000343331/1-481 QRLMLKSLTY PERPPLCRYN IVLKDREEVF LNPNTCTPKN T bmy_20509T0/1-242 ---------- ---------- --IRESSG-- ---------- - BACU000078/1-385 QRLKLKSLTY PERPPLCTYN FVLKESEEIF LSPNTCAPNE I ENSTTRP00000007010/1-431 ---------- ---PPLCTYN FVLKENEEIF LSPNTCTPDE I