KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:23 2014 Check: 00 .. Name: ENSP00000367276/1-683 Len: 686 Check: 318 Weight: 1.00 Name: ENSBTAP00000051947/1-625 Len: 686 Check: 7193 Weight: 1.00 Name: ENSTTRP00000009126/1-684 Len: 686 Check: 4565 Weight: 1.00 Name: bmy_09786T0/1-615 Len: 686 Check: 1808 Weight: 1.00 Name: BACU015780/1-369 Len: 686 Check: 7984 Weight: 1.00 // 1 50 ENSP00000367276/1-683 MSTPAVPQDL QLPPSQRAQS AFKEQRRQKL KEHLLRRKTL FAYKQENEML ENSBTAP00000051947/1-625 MSTPAIPQDL QLNPSQRTQS AFREQRRQKL KEHLLKRKTS FACKQENQML ENSTTRP00000009126/1-684 MSTPAVPQDL QLPPSQRAQS AFREQRRQKL KEHLLKRKTF FAYKQENQIL bmy_09786T0/1-615 ---------- ---------- ---------- -------MTA GRTTEADRRY BACU015780/1-369 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000367276/1-683 SSSRDQRVVT SEDQVQEGTK VLKLKTKMAD KENMKRPAES KNNTVVGKHC ENSBTAP00000051947/1-625 LSDGDQRVRT SEGQIQEGKK VLKIKTEMAD KENVGRPTGI KNNLTVEKNC ENSTTRP00000009126/1-684 SSDRDQRVRI SEGQIQEETK VLELKAKMTD KENVGRPTGI KNSITMEKNC bmy_09786T0/1-615 PSGRDQRVRT SEGQIQEETK ILELKAKMAD KENVGRPTGI KNNITMEKKC BACU015780/1-369 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000367276/1-683 IPLKPSNELT NSTVVIDTHK PKDSNQTPHL LLTEDDPQSQ HMTLSQAFHL ENSBTAP00000051947/1-625 IPLKPSNELT NSTLATDPPN SEDNNQTLPL LPVKDDPQSQ HRTLSQTFHL ENSTTRP00000009126/1-684 IPLKPCNELT NSTTAVDTPN FEDNNQTLPL LPIKDDPQSQ HMTLSQAFHL bmy_09786T0/1-615 IPLKPSNELT NSTTAVDTPN FEDNNQTLPL LPIKDDPQSQ HMTLSQAFHL BACU015780/1-369 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000367276/1-683 KNNSKKKQMT TEKQKQDANM PKKPVLGSYR GQIVQSKINS FRKPLQVKDE ENSBTAP00000051947/1-625 KNNSKKKPVI TEKPKHDANV PKKPVLGAYR GQIVQSKINS FRKPLQVKDE ENSTTRP00000009126/1-684 KNNSKKKQMT TEKPKQDANM PKKPVLGSYR GQIVQSKINS FRKPLQVKDE bmy_09786T0/1-615 KNNSKKKQMT TEKPKQDANM PKKPVLGSYR GQIVQSKINS FRKPLQVKDE BACU015780/1-369 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000367276/1-683 SSAATKKLSA TIPKATKPQP VNTSSVTVKS NRSSNMTATT KFVSTTSQNT ENSBTAP00000051947/1-625 SSATTKKLPA TVSKATKPQP GDVSSITVKS DRASHMTSTT KFASTTSQIR ENSTTRP00000009126/1-684 SSAATKKLSA TVSKATKSQP VHASSVTVKS DRASHMTTAT KFVSTTSQSS bmy_09786T0/1-615 SSATTKKLSA TVSKATKSQP VPASSVTVKS DRASHMTTAT KFVSSTSQSS BACU015780/1-369 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000367276/1-683 QLVRPPIRSH HSNTRDTVKQ GISRTSANVT IRKGPHEKEL LQSKTALSSV ENSBTAP00000051947/1-625 HLVRPPIRSQ HNKAQDAMKP GNSRMSANVT VQKGPREKEL ---NTVLSGI ENSTTRP00000009126/1-684 QLVRPSIRSH HSNNQNTMKQ DISRTSASVT VRKGPREKEL LQLNTVSSII bmy_09786T0/1-615 QLVRPSIRSH HSNNQDTMKQ GISRTSASVT VRKGPREKEL LQLNTVSSII BACU015780/1-369 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000367276/1-683 KTSSSQGIIR NKTLSRSIAS EVIARPASLS NDKLMEKSEP VDQRRHTAGK ENSBTAP00000051947/1-625 KTSSSQDIKG DKTLSKSMAA GMVARPASSS NTKLIEKSKS AGQRSHTTVK ENSTTRP00000009126/1-684 KTSSSQDIKR NKTLSRSMTS EMVARPASSS NTKLIEKSKS IDQRRHTMVK bmy_09786T0/1-615 KTSSSQDIKR NKTLSRSMTS ETVARPASSS NTKLIEKSES IDQRRHTMVK BACU015780/1-369 ---------- -------MTS EMVARPASSS NTKLIEKSKS IDQRRHTMVK 351 400 ENSP00000367276/1-683 AIVDSRSAQP KETSEERKAR LSEWKAGKGR VLKRPPNSVV TQHEPAGQNE ENSBTAP00000051947/1-625 AAVDSRWTQP KETAEERKAR LSEWKAGKGR ILKRPPSSAV TRPEPETQNE ENSTTRP00000009126/1-684 AAIDSRWTQP RETAEERKAR LSEWKAGKGR VMKRPPSSVV TQPEPEAQNE bmy_09786T0/1-615 AAIDSRWTQP RETAEERKAR LSEWKAGKGR VMKRPPSSVV TQPEPEAQNE BACU015780/1-369 AAIDSRWTQP RETAEERKAR LSEWKAGKGR VMKRPPSSVV TQPEPEAQNE 401 450 ENSP00000367276/1-683 KPVGSFWTTM AEEDEQRLFT EKVNNTFSEC LNLINEGCPK EDILVTLNDL ENSBTAP00000051947/1-625 QPVGSFWTTM AEEDEQRLFT EKVNKTFSEC LNLINE---- ---------- ENSTTRP00000009126/1-684 KPVGSFWTTM AEEDEQRVFT EKVNKTFSEC LNLINEGCPK EEVLVTLNDL bmy_09786T0/1-615 KP-------- ---------- ---------- ------GCPK EEVLVTLNDL BACU015780/1-369 KPVGSFWTTM AEEDEQRLFT EKVNKTFSEC LNLINEGCPK QEVLVTLDDL 451 500 ENSP00000367276/1-683 IKNIPDAKKL VKYWICLALI EPITSPIENI IAIYEKAILA GAQPIEEMRH ENSBTAP00000051947/1-625 ---------- ---------- ---------- ---------- ---PIEEMRH ENSTTRP00000009126/1-684 IKNIPDAKKL VKYWICLARV EPLTSPIENV IAIYEKAILA GAQPIEEMRH bmy_09786T0/1-615 VKNIPDAKKL VKYWICLARV EPLTSPIENI IAIYEKAILA GAQPIEEMRH BACU015780/1-369 VKNIPDAKKL VKYWICLARV EPLTSPIENI IAIYEKAILA GAQPIEEVRH 501 550 ENSP00000367276/1-683 TIVDILTMKS QEKANLGENM EKSCASKEEV KEVSIEDTGV DVDPEKLEME ENSBTAP00000051947/1-625 TIVDILTRKS QEKLKFGENI EETSAAEEKI QEAHTDDTGV DLESGKLEME ENSTTRP00000009126/1-684 AIVDILTMKS QEKVKFGENI EEACATKEQI QEATTDDTSV NLGSEKPEIE bmy_09786T0/1-615 AIVDILTMKS QEKVKFGENI EEACATKEQI QEATIDDISV NLGSEKPEIE BACU015780/1-369 AIVDILTMKS QEKVKFGENI EEACATKEQI QEATIDDISV NLGSEKPEIE 551 600 ENSP00000367276/1-683 SKLHRNLLFQ DCEKEQDNKT KDPTHDVKTP NTETRTSCLI KYNVSTTPYL ENSBTAP00000051947/1-625 NNPPRN-VFQ DCEKEQDDKV KDPTSDVKTP STNTRAGCLI KYNVSTTPYL ENSTTRP00000009126/1-684 NKHPRNVVFQ GCEKEQDDKT KDPTSDVKTP NTETRAGCLI KYNVSTTPYL bmy_09786T0/1-615 NKHPRNVVFQ GCEKEQDDKT KDPTSDVKTP NTETRAGCLI KYNVSTTPYL BACU015780/1-369 NKHPRNVVFQ GCEKEQDDKT KDPTSDVKTP NTETRAGCLI KYNVSTTPYL 601 650 ENSP00000367276/1-683 QSVKKKVQFD GTNSAFKELK FLTPVRRSRR LQEKTSKLPD MLKDHYPCVS ENSBTAP00000051947/1-625 QSVKKKMQFD ETNSAYKELK FLTPVRRSRR LQEKTSKLPD MLKDHYPCVS ENSTTRP00000009126/1-684 QSVKKKMQFD ETNSAFKELK FLTPVRRSRR LQEKTSKLPD MLKDHFPCVS bmy_09786T0/1-615 QSVKKKMQFD ETNSAFKELK FLTPVRRSRR LQEKTSKLPD MLKDHYPCVS BACU015780/1-369 QSVKKKMQFD ETNSAFKELK FLTPVRRSRR LQEKTSKLPD MLKDHYPCVS 651 700 ENSP00000367276/1-683 SLEQLTELGR ETDAFVCRPN AALCRVYYEA DTT--- ENSBTAP00000051947/1-625 SLEQLTELGC ETDAFVCRPN TALCGMFSEP DPTEEE ENSTTRP00000009126/1-684 SLEQLTELGS ETDAFVCRPN AALCRLYSET DTTE-- bmy_09786T0/1-615 SLEQLTELGS ETDAFVCRPN AALCRLYLET DTTEEK BACU015780/1-369 SLEQLTELGS ETDAFVCRPN AALCRLYLEA DTTEEK