KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:23 2014 Check: 00 .. Name: BACU001720/1-94 Len: 495 Check: 6637 Weight: 1.00 Name: ENSP00000355523/1-487 Len: 495 Check: 1680 Weight: 1.00 Name: ENSBTAP00000051949/1-469 Len: 495 Check: 136 Weight: 1.00 Name: bmy_22313T0/1-276 Len: 495 Check: 6131 Weight: 1.00 Name: ENSTTRP00000003586/1-484 Len: 495 Check: 7900 Weight: 1.00 // 1 50 BACU001720/1-94 ---------- ---------- ---------- ---------- ---------- ENSP00000355523/1-487 MAQGNNYGQT SNGVADESPN MLVYRKMEDV IARMQDEKNG IPIRTVKSFL ENSBTAP00000051949/1-469 MAQGNNYGQT SNGVADESPN MLVYRKMEDV IARMQDEKNG IPIRTVKSFL bmy_22313T0/1-276 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003586/1-484 MAQGNNYGQT SNGVADESPN MLVYRKMEDV IARMQDEKNG IPIRTVKSFL 51 100 BACU001720/1-94 ---------- ---------- ---------- ---------- ---------- ENSP00000355523/1-487 SKIPSVFSGS DIVQWLIKNL TIEDPVEALH LGTLMAAHGY FFPISDHVLT ENSBTAP00000051949/1-469 SKIPSVFSGS DIVQWLIKNL TIEDPVEALH LGTLMAAHGY FFPISDHVLT bmy_22313T0/1-276 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003586/1-484 SKIPSVFSXX XXXXXXXXXX XXXXXXKTLH LGTLMAAHGY FFPISDHVLT 101 150 BACU001720/1-94 ---------- ---------- ---------- ---------- ---------- ENSP00000355523/1-487 LKDDGTFYRF QTPYFWPSNC WEPENTDYAV YLCKRTMQNK ARLELADYEA ENSBTAP00000051949/1-469 LKDDGTFYRF QTPYFWPSNC WEPENTDYAV YLCKRTMQNK ARLELADYEA bmy_22313T0/1-276 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003586/1-484 LKDDGTFYQF QTPYFWPSNC WEPENTDYAV YLCKRTMQNK ARLELADYEA 151 200 BACU001720/1-94 ---------- ---------- ---------- ---------- ---------- ENSP00000355523/1-487 ESLARLQRAF ARKWEFIFMQ AEAQAKVDKK RDKIERKILD SQERAFWDVH ENSBTAP00000051949/1-469 ESLARLQRAF ARKWEFIFMQ AEAQAKVDKK RDKIERKILD SQERAFWDVH bmy_22313T0/1-276 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003586/1-484 ESLARLQRAF ARKWEFIFMQ AEAQAKVDKK RDKIERKILD S-ERAFWDVH 201 250 BACU001720/1-94 ---------- ---------- ---------- ---------- ---------- ENSP00000355523/1-487 RPVPGCVNTT EVDIKKSSRM RNPHKTRKSV YGLQNDIRSH SPTHTPTPET ENSBTAP00000051949/1-469 RPVPGCVNTT EVDIKKSSRM RNPHKTRKSV YGLQNDIRSH SPTHTPTPET bmy_22313T0/1-276 ---------- ---------M RNPHKTRKSV YGLQNDIRSH SPTHTPTPET ENSTTRP00000003586/1-484 RPVPGCVNTT EVDIKKSSRM RNPHKTRKSV YGLQNDIRSH SPTHTPTPET 251 300 BACU001720/1-94 ---------- ---------- -----MSKVA DSLLSYTEQY VEYDPFLVPP ENSP00000355523/1-487 KPPTEDELQQ QIKYWQIQLD RHRLKMSKVA DSLLSYTEQY LEYDPFLLPP ENSBTAP00000051949/1-469 KPPTEDELQQ QIKYWQIQLD RHRLKMSKVA DSLLSYTEQY VEYDPFLAPP bmy_22313T0/1-276 KPPTEDELQQ QIKYWQIQLD RHRLKMSKVA DSLLSYTEQY VEYDPFLVPP ENSTTRP00000003586/1-484 KPPTEDELQQ QLKYWQIQLD RHRLKMSKVA DSLLSYTEQY VEYDPFLVPP 301 350 BACU001720/1-94 DPSNPWLSDD TTFWELEASK EPSQQRVKRW GFGMDEALKD PVGREQFLKF ENSP00000355523/1-487 DPSNPWLSDD TTFWELEASK EPSQQRVKRW GFGMDEALKD PVGREQFLKF ENSBTAP00000051949/1-469 DPSNPWLSDD TTFWELEASK EPSQQRVKRW GFGMDEALKD PVGREQFLKF bmy_22313T0/1-276 DPSNPWLSDD TTFWELEASK EPSQQRVKRW GFGMDEALKD PVGREQFLKF ENSTTRP00000003586/1-484 DPSN-WLS-- --FWELEASK EPSQQR---- -FGMDEALKD PVGKEQFLKF 351 400 BACU001720/1-94 LESEFSSENL R--------- --PVTIPPTS ---------- ---------- ENSP00000355523/1-487 LESEFSSENL RFWLAVEDLK KRPIKEVPSR VQEIWQEFLA PGAPSAINLD ENSBTAP00000051949/1-469 LESEFSSENL RFWLAVEDLK KRPIREVPSR VQEIWQEFLA PGAPSAINLD bmy_22313T0/1-276 LESEFSSENL RFWLAVEDLK KRPIREVPSR VQEIWQEFLA PGAPSAINLD ENSTTRP00000003586/1-484 LESEFSSENL RFWLAVEDLK KRPIREVPSR VQEIWQEFLA PGAPSAINLD 401 450 BACU001720/1-94 ---------- ---------- ---------- ---------- ---------- ENSP00000355523/1-487 SKSYDKTTQN VKEPGRYTFE DAQEHIYKLM KSDSYPRFIR SSAYQELLQA ENSBTAP00000051949/1-469 SKSYDKTTQN VKEPGRYTFE DAQEHIYKLM KSDSYPRFIR SSAYQELLQA bmy_22313T0/1-276 SKSYDKTTQN VKEPGRYTFE DAQEHIYKLM KSDSYPRFIR SSAYQELLQA ENSTTRP00000003586/1-484 SKSYDKTTQN VKEPGRYTFE DAQEHIYKLM KSDSYPRFIR SSAYQELLQA 451 500 BACU001720/1-94 ---------- ---------- ---------- ---------- ----- ENSP00000355523/1-487 KKKSGNSMDR RTSFEKFAQN VGKSL----- ---TSKRLTS LAQSY ENSBTAP00000051949/1-469 KKK------- ---------- -GKSL----- ---TSKRLTS LVQSY bmy_22313T0/1-276 KKKSEYSMDR RTSFENFAQN VGRNIPIFPC HKNCTPTLRA STNLL ENSTTRP00000003586/1-484 KKKSEYSMDR RTSFENFAQN VGRNIPIFPC HKNCTPTLRA STNLL