KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:25 2014 Check: 00 .. Name: ENSP00000300101/1-712 Len: 712 Check: 3558 Weight: 1.00 Name: ENSBTAP00000052021/1-707 Len: 712 Check: 8108 Weight: 1.00 Name: ENSTTRP00000012377/1-706 Len: 712 Check: 5400 Weight: 1.00 Name: bmy_03898T0/1-711 Len: 712 Check: 3533 Weight: 1.00 Name: BACU020035/1-711 Len: 712 Check: 2879 Weight: 1.00 // 1 50 ENSP00000300101/1-712 MGMRIKLQST NHPNNLLKEL NKCRLSETMC DVTIVVGSRS FPAHKAVLAC ENSBTAP00000052021/1-707 MGMRIKLQST NHPNNLLKEL NKCRLSETMC DVTIVVGSRS FPAHKAVLAC ENSTTRP00000012377/1-706 MGMRIKLQST NHPNNLLKEL NKCRLSETMC DVTIVVGSRS FPAHKAVLAC bmy_03898T0/1-711 MGMRIKLQST NHPNNLLKEL NKCRLSETMC DVTIVVGSRS FPAHKAVLAC BACU020035/1-711 MGMRIKLQST NHPNNLLKEL NKCRLSETMC DVTIVVGSRS FPAHKAVLAC 51 100 ENSP00000300101/1-712 AAGYFQNLFL NTGLDAARTY VVDFITPANF EKVLSFVYTS ELFTDLINVG ENSBTAP00000052021/1-707 AAGYFQNLFL NTGLDAARTY VVDFITPANF EKILSFVYTS ELFTDLINVG ENSTTRP00000012377/1-706 AAGYFQNLFL NTGLDAARTY VVDFITPANF EKILSFVYTS ELFTDLINVG bmy_03898T0/1-711 AAGYFQNLFL NTGLDAARTY VVDFITPANF EKILSFVYTS ELFTDLINVG BACU020035/1-711 AAGYFQNLFL NTGLDAARTY VVDFITPANF EKILSFVYTS ELFTDLINVG 101 150 ENSP00000300101/1-712 VIYEVAERLG MEDLLQACHS TFPDLESTAR AKPLTSTSES HSGTLSCPSA ENSBTAP00000052021/1-707 VIYEVAERLG MDDLLRACHS TFPDLESTAV AKPLTSTSEN HSGTPSCSSV ENSTTRP00000012377/1-706 VIYEVAERLG MEDLLRACHS TFPDLESTAV AKPLTSTSES HSSTLSCSSA bmy_03898T0/1-711 VIYEVAERLG MEDLLRACHS TFPDLESSAV AKPLTSTSES HSSTLSCSSA BACU020035/1-711 VIYEVAERLG MEDLLQACHS TFPDLESSAV AKPLTSTSES HSSTLSCSSA 151 200 ENSP00000300101/1-712 EPAHPLGELR GGGDYLGADR NYVLPSDAGG SYKEEEKNVA SDANHSLHLP ENSBTAP00000052021/1-707 EPPHPLGELR GSGEHFGPDR NYALPSDAGG NYKEEERNVT SDTNHSL--- ENSTTRP00000012377/1-706 EPAHPLGELR GGGEHFGPDR NYALPSDAGG NYKEEERNVT SDTNHSLPLP bmy_03898T0/1-711 EPAHPLGELR GAGEHFGPDR NYALPSDAGG NYKEEERNVT GDTNHSLPLX BACU020035/1-711 EPAHPLGELR GAGEHFGPDR NYALPSDAGG NYKEEERNVT GDTNHSLPLP 201 250 ENSP00000300101/1-712 QPPPPPPKTE DHDTPAPFTS IPSMMTQPLL GTVSTGIQTS TSSCQPYKVQ ENSBTAP00000052021/1-707 --QPLPPKTE DHDAPAPFTS VPSVVTQPVL GTVSTGIQTS TSSCQPYKVQ ENSTTRP00000012377/1-706 Q-QPLPPKTE DHDAPAPFTS VPNVVTQPVL GAVGMGVQTS TRSCQPYKVQ bmy_03898T0/1-711 Q-QPLPPKTE DHDAPAPFTP VPSVVTQPVL GTVSMGVQTS TSSCQPYKVQ BACU020035/1-711 Q-QPLPPKTE DHDAPAPFTP VPSVVTQPVL GTVSMGVQTS TSSCQPYKVQ 251 300 ENSP00000300101/1-712 SNGDFSKNSF LTPDNAVDIT TGTNSCLSNS EHSKDPGFGQ MDELQLEDLG ENSBTAP00000052021/1-707 SNGDFNKNSF FTPDSAVDIT TGTNSCLSNS DHSKDPSFGQ MDELQLEDLG ENSTTRP00000012377/1-706 SNGDFSKNSF FTPDNAIDIT TGTNSCLSNS DHSKDPSFGQ MDELQLEDLG bmy_03898T0/1-711 SNGDFSKNSF FXPDNAIDIT TGTNSCLSNS DHSKDPSFGQ MDELQLEDLG BACU020035/1-711 SNGDFSKNSF FTPDNAIDIT TGTNSCLSNS DHSKDPSFGQ MDELQLEDLG 301 350 ENSP00000300101/1-712 DDDLQFEDPA EDIGTTEEVI ELSDDSEDEL AFGENDNREN KAMPCQVCKK ENSBTAP00000052021/1-707 DDDLQFEDPT EEIGTAEEVI ELSDDSEDEL TFGESENREN KAMPCQVCKK ENSTTRP00000012377/1-706 DEDLQFEDPT EEIGTAEEVI ELSDDSEDEL TFGESDSREN KAMPCQVCKK bmy_03898T0/1-711 DDDLQFEDPT EEIGTAEEVI ELSDDSEDEL TFGESDNREN KAMPCQVCKK BACU020035/1-711 DDDLQFEDPA EEIGTAEEVI ELSDDSEDEL TFGESDNREN KAMPCQVCKK 351 400 ENSP00000300101/1-712 VLEPNIQLIR QHARDHVDLL TGNCKVCETH FQDRNSRVTH VLSHIGIFLF ENSBTAP00000052021/1-707 VLEPNIQLIR QHARDHVDLL TGNCKVCETH FQDRNSRVTH VLSHIGIFLF ENSTTRP00000012377/1-706 VLEPNIQLIR QHARDHVDLL TGNCKVCETH FQDRNSRVTH VLSHIGIFLF bmy_03898T0/1-711 VLEPNIQLIR QHARDHVDLL TGNCKVCETH FQDRNSRVTH VLSHIGIFLF BACU020035/1-711 VLEPNIQLIR QHARDHVDLL TGNCKVCETH FQDRNSRVTH VLSHIGIFLF 401 450 ENSP00000300101/1-712 SCDMCETKFF TQWQLTLHRR DGIFENNIIV HPNDPLPGKL GLFSGAASPE ENSBTAP00000052021/1-707 SCDMCETKFF TQWQLTLHRR DGIFENNIIV HPNDPLPGKL GLFAGAVSAE ENSTTRP00000012377/1-706 SCDMCETKFF TQWQLTLH-R DGF--ENIIV HPN-PLPGKL GLFSGAASP- bmy_03898T0/1-711 SCDMCETKFF TQWQLTLHRR DGIFENNIIV HPNDPLPGKL GLFSGAASAE BACU020035/1-711 SCDMCETKFF TQWQLTLHRR DGIFENNIIV HPNDPLPGKL GPFSGAASAE 451 500 ENSP00000300101/1-712 LKCAACGKVL AKDFHVVRGH ILDHLNLKGQ ACSVCDQRHL NLCSLMWHTL ENSBTAP00000052021/1-707 LKCAACGKAL AKDFHVVRGH ILDHLNLKGQ ACSVCDQRHL NLCSLMWHTL ENSTTRP00000012377/1-706 LQFVACEKAL AKDFHVVRDH ILDHMNLKGQ ACSVCDQRHL NLCSLMWHTL bmy_03898T0/1-711 LQCAACGKAL AKDFHVVRGH ILDHLNLKGQ ACSVCDQRHL NLCSLMWHTL BACU020035/1-711 LQCAACGKAL AKDFHVVRGH ILDHLNLKGQ ACSVCDQRHL NLCSLMWHTL 501 550 ENSP00000300101/1-712 SHLGISVFSC SVCANSFVDW HLLEKHMAVH QSLEDALFHC RLCSQSFKSE ENSBTAP00000052021/1-707 SHLGISVFSC SVCANSFVDW HLLEKHMAVH QSLEDALFRC HLCSQSFKSE ENSTTRP00000012377/1-706 SHLGISVFSC SVCANSFVDW PLLEKHMAVH QSLEDALFHC HLCSQSFKSK bmy_03898T0/1-711 SHLGISVFSC SVCANSFVDW PLLEKHMAVH QSLEDALFHC HLCSQSFKSE BACU020035/1-711 SHLGISVFSC SVCANSFVDW PLLEKHMAVH QSLEDALFHC HLCSQSFKSE 551 600 ENSP00000300101/1-712 AAYRYHVSQH KCNSGLDARP GFGLQHPALQ KRKLPAEEFL GEELALQGQP ENSBTAP00000052021/1-707 AAYRYHVSQH KCNSGLDTRP GFGLQNPALQ KRKLPAEEFL SEELALQGQP ENSTTRP00000012377/1-706 AAYRYHVSQH KCNSGLDARP GLGLQHPALQ KRKLPAEEFL NEELVLQGQP bmy_03898T0/1-711 AAYRYHVSQH KCNSGLDTRP GFGLQHPALQ KRKLPAEEFL NEELVLQGQP BACU020035/1-711 AAYRYHVSQH KCNSGLDTRP GFGLQHPALQ KRKLPAEEFL NEELVLQGQP 601 650 ENSP00000300101/1-712 GNSKYSCKVC GKRFAHTSEF NYHRRIHTGE KPYQCKVCHK FFRGRSTIKC ENSBTAP00000052021/1-707 GNSKYSCKVC GKRFAHTSEF NYHRRIHTGE KPYQCKVCHK FFRGRSTIKC ENSTTRP00000012377/1-706 GNSKYSCKVC GKRFAHTSEF NYHRRIHTGE KPYQCKVCHK FFRGRSTIKC bmy_03898T0/1-711 GNSKYSCKVC GKRFAHTSEF NYHRRIHTGE KPYQCKVCHK FFRGRSTIKC BACU020035/1-711 GNSKYSCKVC GKRFAHTSEF NYHRRIHTGE KPYQCKVCHK FFRGRSTIKC 651 700 ENSP00000300101/1-712 HLKTHSGALM YRCTVCGHYS STLNLMSKHV GVHKGSLPPD FTIEQTFMYI ENSBTAP00000052021/1-707 HLKTHSGALM YRCTVCGHYS STLNLMSKHV GVHKGSLPPD FTIEQTFMYI ENSTTRP00000012377/1-706 HLKTHSGALM YRCTVCGHYS STLNLMSKHV GVHKGSLPPD FTIEQTFMYI bmy_03898T0/1-711 HLKTHSGALM YRCTVCGHYS STLNLMSKHV GVHKGSLPPD FTIEQTFMYI BACU020035/1-711 HLKTHSGALM YRCTVCGHYS STLNLMSKHV GVHKGSLPPD FTIEQTFMYI 701 750 ENSP00000300101/1-712 IHSKEADKNP DS ENSBTAP00000052021/1-707 IHSKEAEKNP DS ENSTTRP00000012377/1-706 IHSKEAEKNL DS bmy_03898T0/1-711 IHSKEAEKNP DS BACU020035/1-711 IHSKEAEKNP DS