KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:26 2014 Check: 00 .. Name: ENSBTAP00000052036/1-283 Len: 294 Check: 1391 Weight: 1.00 Name: ENSP00000295896/1-292 Len: 294 Check: 8188 Weight: 1.00 Name: ENSTTRP00000012919/1-283 Len: 294 Check: 6504 Weight: 1.00 Name: bmy_03780T0/1-294 Len: 294 Check: 2923 Weight: 1.00 Name: BACU015098/1-170 Len: 294 Check: 9991 Weight: 1.00 // 1 50 ENSBTAP00000052036/1-283 MDRPHLCTPE RFKVAYERAG QYRRFQQPRK RSDSFKRKGI ERWHEAVSTN ENSP00000295896/1-292 MAQPQLYLPE PFKIAYRKVG QCRRFQQLKK KNGSFKRKGI ERWHRAVSTN ENSTTRP00000012919/1-283 MDHPHLYTPE PFKVAYGRVG RYRRFQQPRK RNGSFKRKGI ERWHRAVSTN bmy_03780T0/1-294 MDHPHLYTPE PFKVAYGKAG QYRRFQQPRK RNGSFKRKGI ERWHRAVSTN BACU015098/1-170 MDHPHLYTPE PFKVAYGKAG QYRRFQQPRK RNGSFKRKGI ERWHRAVSTN 51 100 ENSBTAP00000052036/1-283 L-KQNVLVPR EESSSVSDME FHKSQQNQKK NLVRKVKSVW GRLLSHTYRS ENSP00000295896/1-292 LLKQNVLVPK EESSSDSDMG FHESQQNQKS NLKTKVKTAF GRMLSYKYRS ENSTTRP00000012919/1-283 LVKQNVLVPK EESSNESDME FHESQQNQKR DLVKKVKTFG GRMLLHKYRS bmy_03780T0/1-294 LVKQNVLVPK EESSNESDME FHESQQNQKR DLVKKVKTFL GRMLSHKYRS BACU015098/1-170 LVKQNVLVPK EESSNESDME FHESQQNQKR DLVKKVKTSL GRMLSHKYRS 101 150 ENSBTAP00000052036/1-283 KPASVNEEGA PNHKETLLPN TQSLLLRIVK ELPSPKLFTK PRMRKVSQNA ENSP00000295896/1-292 KPACASQEGS TDHKEALLSN TQSLLPRIVK EFSSPKLFT- AKMRKLSENA ENSTTRP00000012919/1-283 KPASVSREGS TNPKETLLSN TQSLLPRIVK ELPSPKLFTK PRMRKLSQNX bmy_03780T0/1-294 KPASVSGEGS TNPKETLLSN TQSLLPRIVK ELPSPKLFTE SRMRKLSQDA BACU015098/1-170 KPASVSGEGS TNP------- ---------- ---------- ---------- 151 200 ENSBTAP00000052036/1-283 TTQLDAVQAE TEAITQGSTL LRARRTTAFI -CDIIPSGMQ KVPYSSKKRP ENSP00000295896/1-292 TIQLDVVEAE TEEITQGNTL LRARRTTKRL SVTSLPSGLQ KGPYSPKKRP ENSTTRP00000012919/1-283 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX -XXXXXXXXX XXPYSSKKRP bmy_03780T0/1-294 TIQLDVVEAE TEEITQGNTL LRARRTTKRL SVTSLPSGLQ KVPYSSKKRP BACU015098/1-170 ---------- ---------- ---------- ---------- KVPYSSKKRP 201 250 ENSBTAP00000052036/1-283 HFPVFKRKKH SMENILQKPD LTVGKLQMQV DDLIETVTDK SMKLLAQRHA ENSP00000295896/1-292 HFPALKKKKR GMENILRKSD LTVGKLQMQV DDLIETVTDK SMKLLAQRHA ENSTTRP00000012919/1-283 RFPAFKKKKH STENILRKSD LTVGKLQMQV DDLIEAVTDK SMKLLAQRHA bmy_03780T0/1-294 HFPAFKKKKH STENILRKSD LTVGKLQMQV DDLIETVTDK SMKLLAQRHA BACU015098/1-170 HFPAFKKKKH SMENILRKSD LTVVKLQMQ- ------VVDK GFYFGVSKAS 251 300 ENSBTAP00000052036/1-283 ELQHCEFLGD EVLKSSKQFQ RMSKRTMRKY KLKNV----- ---- ENSP00000295896/1-292 ELQQCEFLGD EILQSSKQFQ RISKRTMRKY KLKNMTTKGP GDS- ENSTTRP00000012919/1-283 ELQQCEFLGD EILQSSKQFQ RISKRTMRKY KVKN------ ---- bmy_03780T0/1-294 ELQQCEFLGD EILQSSKQFQ RISKRTMRKY KLKNVCFPCT WCCF BACU015098/1-170 EGQA------ ---------- ---------- ---------- ----