KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:01:27 2014 Check: 00 .. Name: ENSTTRP00000002758/1-619 Len: 954 Check: 3240 Weight: 1.00 Name: ENSBTAP00000052098/1-851 Len: 954 Check: 4217 Weight: 1.00 Name: bmy_12236T0/1-850 Len: 954 Check: 8195 Weight: 1.00 Name: BACU009113/1-824 Len: 954 Check: 9355 Weight: 1.00 // 1 50 ENSTTRP00000002758/1-619 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052098/1-851 MSLSEGQVHR FLDQNPGFAD QYFGRKLSPE DVANACEDGC PEGCTSFREL bmy_12236T0/1-850 MSLSEEQVQA FLDQNPGFAD QYFGRKLSPE AVASACEDGC PAGCTRFQEL BACU009113/1-824 MSLSEEQVQA FLDQNPGFAD QYFGRKLSPE AAASACGDGC PAGCTSFQEL 51 100 ENSTTRP00000002758/1-619 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052098/1-851 CQVEESAALF ELVQDMQENV NMERVVFKIL RRLCSILHAD RCSLFMYRQR bmy_12236T0/1-850 CQ-------- ---------- ---------- ---------- ---------- BACU009113/1-824 CQVEESAALF ELVQDMQESV NMERVVFKIL RRLCAILHAD RCSLFMYRQR 101 150 ENSTTRP00000002758/1-619 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052098/1-851 NGVAELATRL FSVQPDSVLE DCLVPPDSEI VFPLDIGVVG HVAQTKKMVN bmy_12236T0/1-850 ---------- ---------- ---------- ---------- ---------- BACU009113/1-824 NGMAELATRL FSVQPGSVLE DCLVPPDSEI VFPLDIGVVG HVAQTKKTVN 151 200 ENSTTRP00000002758/1-619 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052098/1-851 VQDVMECPHF SSFADELTDY VTRNILATPI MNGKDVVAVI MAVNKLDGPC bmy_12236T0/1-850 ------CPHF SSFADELTDY VTRSILATPI MNGKDVVAVI MAVNKLDGPC BACU009113/1-824 VKDVTECPHF SSFADELTDY VTRSILATPI MNGKDVVAVI MAVNKLDGPC 201 250 ENSTTRP00000002758/1-619 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052098/1-851 FTSEDEDVFL KYLNFGTLNL KIYHLSYLHN CETRRG---- ---------- bmy_12236T0/1-850 FTSEDEDVFL KYLNFGTLNL KIYHLSYLHN CETRRGQVPA RAASQGVATT BACU009113/1-824 FTSEDEGVFL KYLNFGTLNL KIYHLSYLHN CETRRG---- ---------- 251 300 ENSTTRP00000002758/1-619 -------VLL WSANKVFEEL TDIERQFHKA FYTVRAYLNC DRYSVGLLDM ENSBTAP00000052098/1-851 ------QVLL WSANKVFEEL TDIERQFHKA FYTVRAYLNC DRYSVGLLDM bmy_12236T0/1-850 HRYVTPQVLL WSANKVFEEL TDIERQFHKA FYTVRAYLNC DRYSVGLLDM BACU009113/1-824 ------QVLL WSANKVFEEL TDIERQFHKA FYTVRAYLNC DRYSVGLLDM 301 350 ENSTTRP00000002758/1-619 TKEKEFFDVW PVLMGEAPPY SGPRTPDGRE IVFYKVIDYI LHGKEDIKVI ENSBTAP00000052098/1-851 TKEKEFFDVW PVLMGEAQAY SGPRTPDGRE ILFYKVIDYI LHGKEDIKVI bmy_12236T0/1-850 TKEKEFFDVW PVLMGEAQPY SGPRTPDGRE IVFYKVIDYI LHGKEDIKVI BACU009113/1-824 TKEKEFFDVW PVLMGEAQPY SGPRTPDGRE IVFYKVIDYI LHGKEDIKVI 351 400 ENSTTRP00000002758/1-619 PSPPADHWAL ASGLPTYVAE SGFICNIMNA QADEMFKFQE GPLDDSGWVI ENSBTAP00000052098/1-851 PSPPADHWAL ASGLPTYVAE SGFICNIMNA PADEMFNFQE GPLDDSGWIV bmy_12236T0/1-850 PSPPADHWAL ASGLPTYVAE SGFICNIMNA PADEMFKFQE GPLDDSGWII BACU009113/1-824 PSPPADHWAL ASGLPTYVAE SGFICNIMNA PADEMFKFQE GPLDDSGWII 401 450 ENSTTRP00000002758/1-619 KNVLSMPIVN KKEEIVGVAT FYNRKDGKPF DEQDELLME- ---------- ENSBTAP00000052098/1-851 KNVLSMPIVN KK-EIVGVAT FYNRKDGKPF DEQDEVLME- ---------- bmy_12236T0/1-850 KNVLSMPIVN KKEEIVGVAT FYNRKDGKPF DEQDEVLMEV STCHRRAPEA BACU009113/1-824 KNVLSMPIVN KKEEIVGVAT FYNRKDGKPF DEQDEVLME- ---------- 451 500 ENSTTRP00000002758/1-619 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052098/1-851 ---------- ---------- ---------- ---------- ---------- bmy_12236T0/1-850 TPVWWGHRLL RALTRHETPG RAERSRSGGW RPAHRELPVR RRAPVAGDAR BACU009113/1-824 ---------- ---------- ---------- ---------- ---------- 501 550 ENSTTRP00000002758/1-619 --SLTQFLGW SALNADTYDK MNRLENRKDI AQDMVLYHVR CDRDEIQLIL ENSBTAP00000052098/1-851 --SLTQFLGW SVLNTDTYDK MNKLENRKDI AQDMVLYHVR CDREEIQLIL bmy_12236T0/1-850 LQSLTQFLGW SVLNTDTYDK MNKLENRKDI AQDMVLYHVR CDKDEIQLVL BACU009113/1-824 ------FLGW SVLNTDTYDK MNKLENRKDI AQDMVLYHVR CDKDEIQLIL 551 600 ENSTTRP00000002758/1-619 PTRERLGKEP AECEEDELGR ILXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000052098/1-851 PTRERLGKEP ADCEEDELGK ILKEVLPGPA KFDIYEFHFS DLECTELELV bmy_12236T0/1-850 PTRERLGKEP ADCEEDELGK ILKQELPGPT KFDIYEFHFS DLECTELELV BACU009113/1-824 PTRERLGKEP ADCEEDELGK ILKQELPGPT KFDIYEFHFS DLECTELELV 601 650 ENSTTRP00000002758/1-619 XXXXXXXXXX XXXXXXXXXX XVLVRFLFSV SKGYRRITYH NWRHGFNVAQ ENSBTAP00000052098/1-851 KCGIQMYYEL GVVRKFQIPQ EEVWGQAMSA QNGQCGLAKH TRQEGSWRPV bmy_12236T0/1-850 KCGIQMYYEL GVVRKFQIPQ EVLVRFLFSV SKGYRRITYH NWRHGFNVAQ BACU009113/1-824 KCGIQMYYEL GVVRKFQIPQ EVLVRFLFSV SKGYRRITYH NWRHGFNVAQ 651 700 ENSTTRP00000002758/1-619 TMFTLLMTGK LKSYYTDLEA FAMMTAGLCH DIDHRGTNNL YQMXXXXXXX ENSBTAP00000052098/1-851 DRRAVGRAGT W-AFHTAVSW KCVAGTGHCG AWTPCLTSRN LCDRSQNPLA bmy_12236T0/1-850 TMFTLLMTGK LKSYYTDLEA FAMVTAGLCH DIDHRGTNNL YQMKSQDPLA BACU009113/1-824 TMFTLLMTGK LKSYYTDLEA FAMVTAGLCH DIDHRGTNNL YQMKSQDPLA 701 750 ENSTTRP00000002758/1-619 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000052098/1-851 KLHGSSILER HHLEFGKFLL SEETLNIYQN LNRRQHEHVI HLMDIAIIAT bmy_12236T0/1-850 KLHGSSILER HHLEFGKFLL SEETLNIYQN LNRRQHEHVI HLMDIAIIAT BACU009113/1-824 KLHGSSILER HHLEFGKFLL SEETLNIYQN LNRRQHEHVI HLMDIAIIAT 751 800 ENSTTRP00000002758/1-619 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXAMMMTAC ENSBTAP00000052098/1-851 DLALYFKKRT MFQKIVDESK NYEDRKSWVE YLSLETTRKE IVMAMMMTAC bmy_12236T0/1-850 DLALYFKKRT MFQKIVDESQ NYEDRSSWVE YLSLETTRKE IVMAMMMTAC BACU009113/1-824 DLALYFKKRT MFQKIVDESQ NYEDRSSWVE YLSLETTRKE IVMAMMMTAC 801 850 ENSTTRP00000002758/1-619 DLSAITKPWE VQSKVALLVA AEFWEQGDLE RTVLDQQPIX XXXXXXXXXX ENSBTAP00000052098/1-851 DLSAITKPWE VQSKVALLVA AEFWEQGDLE RTVLDQQPIP MMDRNKAAEL bmy_12236T0/1-850 DLSAITKPWE VQSKVALLVA AEFWEQGDLE RTVLDQQPIP MMDRNKAAEL BACU009113/1-824 DLSAITKPWE VQSKVALLVA AEFWEQGDLE RTVLDQQPI- ---------- 851 900 ENSTTRP00000002758/1-619 XXXXXXXXXX XXXXXXXEFS RFHEEILPMF DRLQNNRKEW KTLADEYEVK ENSBTAP00000052098/1-851 PKLQVGFIDF VCTFVYKEFS RFHEEILPMF DRLQNNRKEW KALADEYEAK bmy_12236T0/1-850 PKLQVGFIDF VCTFVYKEFS RFHEEILPMF DRLQNNRKEW KTLADEYEAK BACU009113/1-824 ---------- -------EFS RFHEEILPMF DRLQNNRKEW KTLADEYEAK 901 950 ENSTTRP00000002758/1-619 VKALEEEQRK EAERTAAKK- ---------- --AGTEVCNG GPAPQSST-- ENSBTAP00000052098/1-851 VKALEEDQKK E---TTAKK- ---------- --VGTEICNG GPAPRSST-- bmy_12236T0/1-850 VKALEEEQRK AAERTAAKKG LRSTPAAAKT AQPGLGLQGA GARQQSSTWR BACU009113/1-824 VKALEEEQRK AAERTAAKK- ---------- --VGTEVCNG GPAPQSST-- 951 1000 ENSTTRP00000002758/1-619 CCIL ENSBTAP00000052098/1-851 CRIL bmy_12236T0/1-850 KARL BACU009113/1-824 CCIL