KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:28 2014 Check: 00 .. Name: bmy_02799T0/1-398 Len: 674 Check: 1167 Weight: 1.00 Name: BACU004632/1-515 Len: 674 Check: 6403 Weight: 1.00 Name: ENSP00000421566/1-666 Len: 674 Check: 5891 Weight: 1.00 Name: ENSTTRP00000007466/1-623 Len: 674 Check: 3252 Weight: 1.00 Name: ENSBTAP00000052124/1-623 Len: 674 Check: 3620 Weight: 1.00 // 1 50 bmy_02799T0/1-398 -------MSR RSCSTLILIP NQT------- ---------- ---------- BACU004632/1-515 MWCSDLKDGT GSSFSLQRAN YQDFQLKNLR IIEPNEATHS GHPGVETDSR ENSP00000421566/1-666 -------MAA SRKPPRVRVN HQDFQLRNLR IIEPNEVTHS GDTGVETDGR ENSTTRP00000007466/1-623 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052124/1-623 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_02799T0/1-398 HPPAVNSISL WRNSSPAFAE RQL------- ---------Q SEYIAPCDCR BACU004632/1-515 MAPKVTS-EL LRQLRQAMRN LEYVTEPIQA YIIPSGDAHQ SEYIAPCDCR ENSP00000421566/1-666 MPPKVTS-EL LRQLRQAMRN SEYVTEPIQA YIIPSGDAHQ SEYIAPCDCR ENSTTRP00000007466/1-623 MAPKVTS-EL LRQLRQAMRN LEYVTEPIQA YIIPSGDAHQ SEYIAPCDCR ENSBTAP00000052124/1-623 MAPKITS-EL LRQLRQAMRN LEYVTEPIQA YIIPSGDAHQ SEYIAPCDCR 101 150 bmy_02799T0/1-398 RAFVSGFDGS AGTAIVTEEH AAMWTDGRYF LQAAKQMDSN WTLMKMGLKD BACU004632/1-515 RAFVSGFDGS AGTAIVTEEH AAMWTDGRYF LQAAKQMDSN WTLMKMGLKD ENSP00000421566/1-666 RAFVSGFDGS AGTAIITEEH AAMWTDGRYF LQAAKQMDSN WTLMKMGLKD ENSTTRP00000007466/1-623 RAFVSGFDGS AGTAIVTEEH AAMWTDGRYF LQAAKQMDSN WTLMKMGLKD ENSBTAP00000052124/1-623 RAFVSGFDGS AGTAIVTEEH AAMWTDGRYF LQAAKQMDSN WTLMKMGLKD 151 200 bmy_02799T0/1-398 TPTQEDWLVS VLPEGSRVGV DPLIIPTDYW KKMAKVLRSA GHHLIPVKEN BACU004632/1-515 TPTQEDWLVS VLPEGSRVGV DPLIIPTDYW KKMAKVLRSA GHHLIPVKEN ENSP00000421566/1-666 TPTQEDWLVS VLPEGSRVGV DPLIIPTDYW KKMAKVLRSA GHHLIPVKEN ENSTTRP00000007466/1-623 TPTQEDWLVS VLPEGSRVGV DPLIIPTDYW KKMAKVLRSA GHHLIPVKEN ENSBTAP00000052124/1-623 TPTQEDWLVS VLPEGSRVGV DPLIIPTDYW KKMAKVLRSA GHHLIPVKDN 201 250 bmy_02799T0/1-398 LVDKIWTDRP ERPCKPLITL GLDYTGISWK DKVVDLRLKM AERNVVWFVV BACU004632/1-515 LVDKIWTDRP ERPCKPLITL GLDYTGISWK DKVVDLRLKM AERNVVWFVV ENSP00000421566/1-666 LVDKIWTDRP ERPCKPLLTL GLDYTGISWK DKVADLRLKM AERNVMWFVV ENSTTRP00000007466/1-623 LVDKIWTDRP ERPCKPLITL GLDYTGISWK DKVVDLRLKM AERNVVWFVV ENSBTAP00000052124/1-623 LVDKIWTDRP ERPCKPLITL GLDYTGISWK DKVADLRLKM AERNVVWFVV 251 300 bmy_02799T0/1-398 TALDEIAWLF NLRGSDVEHN PVFFSYAVIG LETIMLFIDG DRTDAPSVKE BACU004632/1-515 TALDEIAWLF NLRGSDVEHN PVFFSYAVIG LETIMLFIDG DRTDVPSVKE ENSP00000421566/1-666 TALDEIAWLF NLRGSDVEHN PVFFSYAIIG LETIMLFIDG DRIDAPSVKE ENSTTRP00000007466/1-623 TALDEIAWLF NLRGSDVEHN PVFFSYAIIG LETIMLFIDG DRTDAPSVKE ENSBTAP00000052124/1-623 TALDEIAWLF NLRGSDVEHN PVFFSYAILG LETIMLFIDG DRIDAPIVKE 301 350 bmy_02799T0/1-398 HLLLDLGLEA EYRIQVLPYK SILSELKTLC ASLSPREKVW VSDKASYAVS BACU004632/1-515 HLLLDLGLEA EYRIQVLPYK SILSELKTLC ASLSPREKVW VSDKASYAVS ENSP00000421566/1-666 HLLLDLGLEA EYRIQVHPYK SILSELKALC ADLSPREKVW VSDKASYAVS ENSTTRP00000007466/1-623 HLLLDLGLEA EYRIQVLPYK SILSELKTLC ASLSPREKVW VSDKASYAVS ENSBTAP00000052124/1-623 HLLLDLGLEA EYRIQVLPYK SILSELKILC ASLSPREKVW VSDKASYAVS 351 400 bmy_02799T0/1-398 EAIPKDHRCC MPYTPICIAK AVKNSAESEG MRRAHIKDAV ALCELFNWLE BACU004632/1-515 EAIPKDHRCC MPYTPICIAK AVKNSAESEG MRRAHIKDAV ALCELFNWLE ENSP00000421566/1-666 ETIPKDHRCC MPYTPICIAK AVKNSAESEG MRRAHIKDAV ALCELFNWLE ENSTTRP00000007466/1-623 EAIPKDHRCC MPYTPICIAK AVKNSAESEG MRRAHIKDAV ALCELFNWLE ENSBTAP00000052124/1-623 EAIPKDHRCC MPYTPICIAK AVKNSAESEG MRRAHIKDAV ALCELFNWLE 401 450 bmy_02799T0/1-398 KEVPKGGVTE ISAADKAEEF RRQQGDFVDL SFPTISSTGP NGAIIHYA-- BACU004632/1-515 KEVPKGGVTE ISAADKAEEF RRQQADFVDL SFPTISSTGP NGAIIHYAPV ENSP00000421566/1-666 KEVPKGGVTE ISAADKAEEF RRQQADFVDL SFPTISSTGP NGAIIHYAPV ENSTTRP00000007466/1-623 KEVPKGGVTE ISAADKAEEF RRQQADFVDL SFPTISSTGP NGAIIHYAPV ENSBTAP00000052124/1-623 KEVPKGGVTE ISAANKAEEF RRQQADFVDL SFPTISSTGP NGAIIHYAPV 451 500 bmy_02799T0/1-398 ---------- ---------- ---------- ---------- ---------- BACU004632/1-515 PETNRTLSLD EVYLIDSGAQ YKDGTTDVTR TMHFGTPTAY EK-------- ENSP00000421566/1-666 PETNRTLSLD EVYLIDSGAQ YKDGTTDVTR TMHFGTPTAY EKECFTYVLK ENSTTRP00000007466/1-623 PETNRTLSLD EVYLIDSGAQ YKDGTTDVTR TMHFGTPTAY EKECFTCVLK ENSBTAP00000052124/1-623 PETNRTLSLD EVYLIDSGAQ YKDGTTDVTR TMHFGTPTAY EKECFTYVLK 501 550 bmy_02799T0/1-398 ---------- ---------- ---------- ---------- ---------- BACU004632/1-515 ---------- ---------- ---------- ---------- -------VRE ENSP00000421566/1-666 GHIAVSAAVF PTGTKGHLLD SFARSALWDS GLDYLHGTGH GVGSFLNVHE ENSTTRP00000007466/1-623 GHIAVSAAVF PTGTKGHLLD SFARSALWDS GLDYLHGTGH GVGSFLNVHE ENSBTAP00000052124/1-623 GHIAVSAAVF PTGTKGHLLD SFARSALWDS GLDYLHGTGH GVGSFLNVHE 551 600 bmy_02799T0/1-398 ---------- ---------- ---------- ---------- ---------- BACU004632/1-515 ---------- ---------- ---------- ---------- ---------- ENSP00000421566/1-666 GPCGISYKTF SDEPLEAGMI VTDEPGYYED GAFGIRIENV VLVVPVKTKY ENSTTRP00000007466/1-623 GPCGISYKTF SDEPLEAGMI VTDEPGYYED GAFGIRIENV VLVVPVKTKY ENSBTAP00000052124/1-623 GPCGISYKTF SDEPLEAGMI VTDEPGYYED GAFGIRIENV VLVVPVKTKY 601 650 bmy_02799T0/1-398 ---------- ---------- ---------- ---------- ---------- BACU004632/1-515 --NSRGPLC- ---------- ------SLTV LSCE------ ---KDCIHK- ENSP00000421566/1-666 NFNNRGSLTF EPLTLVPIQT KMIDVDSLTD KECDWLNNYH LTCRDVIGKE ENSTTRP00000007466/1-623 NFSNRGSLTF DPLTLVPIQT KMIDVDSLTD KECDWLNNYH LTCRDVIGKE ENSBTAP00000052124/1-623 NFNNRGSLTF EPLTLVPIQT KMIDVDSLTD KECDWLNSYH LTCRDVIGKE 651 700 bmy_02799T0/1-398 ---------- ---------- ---- BACU004632/1-515 ---------- ---------- ---- ENSP00000421566/1-666 LQKQGRQEAL EWLIRETQPI SKQH ENSTTRP00000007466/1-623 LQKQGRQEAL EWLIRETQPI SKQH ENSBTAP00000052124/1-623 LQKQGRQEAL EWLIRETQPI SKQP