KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:01:31 2014 Check: 00 .. Name: ENSP00000412388/1-976 Len: 1023 Check: 7086 Weight: 1.00 Name: ENSBTAP00000052147/1-975 Len: 1023 Check: 5493 Weight: 1.00 Name: bmy_14822T0/1-1022 Len: 1023 Check: 761 Weight: 1.00 Name: BACU016120/1-525 Len: 1023 Check: 1975 Weight: 1.00 // 1 50 ENSP00000412388/1-976 ---------- ---------- ---------- ---------- -------MTR ENSBTAP00000052147/1-975 ---------- ---------- ---------- ---------- -------MTR bmy_14822T0/1-1022 MPCLDPMGPL QDLGPDTALG EDCTSSPASR AKAPKGRVSC SLETSFKMTR BACU016120/1-525 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000412388/1-976 TDPPDLLVST VYQDIKVATP GPASKCSPCE RSVARPAEPA PFNKRHCRSF ENSBTAP00000052147/1-975 TDPPDLLVST VYQDIKVAAP GPVSRPPPCE RPMARPAAPA PFNKRHCRSF bmy_14822T0/1-1022 TDPPDLLVST VYEDIKVAAP GPVSRPPPCE RPMARPAAPA PFNKRHCRSF BACU016120/1-525 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000412388/1-976 DFLEALDGPA METLPEPPPP ESAVPRARTR EAEPRRRARS KSAPRAPPGL ENSBTAP00000052147/1-975 DFLEGLDGVA MEARPEAPPP EPAAPRARSR DGETRRRARS KSAPRAPPNL bmy_14822T0/1-1022 DFLETLDGEA MEARPEPPPP EPAAPRARSR DGEPRRRARS KSAPRAAPGL BACU016120/1-525 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000412388/1-976 TPAPASPPVL PRRGREAQRA ARAEASPRRE PAYPALRALA NELHPIKLQP ENSBTAP00000052147/1-975 APAPASPPVL PRRGREAQRT ARADASPRRE PAYPALRALA NELHPIKLQP bmy_14822T0/1-1022 APAPASPPVP PRRGREAQRA APADASPRRE PAYPALRALA NELHPIKLQP BACU016120/1-525 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000412388/1-976 QRGGPGRVAP LCAAAGRCAP PEPPAGPAPH VRCRLDIKPD DAVLQHATRG ENSBTAP00000052147/1-975 QRGGPGRIAP LCAAANRCAP AEPPAGPAPH VRCRLDIKPD EAVLQHAARG bmy_14822T0/1-1022 QRGGPGRMAP LCAAANRCAL AEPPAGPAPH VRCRLDVKPD DAVLQHAARG BACU016120/1-525 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000412388/1-976 SRSCGPTEAA HWARPAPQFH GLTVPGPRHM ALSRTPTPSD SYCADPRAFY ENSBTAP00000052147/1-975 SRPCGPPEPA PWPRAAPQLH GLTVPGPRHV ALSRTPTPSD SYCTDPRALY bmy_14822T0/1-1022 SRPCGPTETA PWPRAAPQLH GLTVPGPRHV GLSLTPTPSD SYCADPRALY BACU016120/1-525 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000412388/1-976 CDGPLPGPRD YAERRSLPFT TPPGPTQFFY TEEPQGFRGS FAASPGPTFD ENSBTAP00000052147/1-975 CDGPLPGPRD YAERRSVPFT TPPGPTQFFY TEEPEGHPGG FMASPGPPFD bmy_14822T0/1-1022 CDGPLPGSRD HAERRSLPFT TPPGPTQFFY TEEPEGHPGG FMASPGPPFD BACU016120/1-525 ---------- ---------- ---------- ---------- -MASPGPPFD 351 400 ENSP00000412388/1-976 AYYPRPYPSE ELSGPSPRRM GGYYAGEVRT FPIQEPPSRS YYGEAPRAYG ENSBTAP00000052147/1-975 GYYPRPFLPE EPPGPSPRRG SGYYAGEART FPVQEPPSRS YYGEAPRAYG bmy_14822T0/1-1022 SYYPRPFLSE EPPGPNPRRG GVYYAGEVRT FPVQEPPSRS YYGEVPRAYG BACU016120/1-525 SYYPRPFLSE EPPGPSPRRG GVYYAGEVRT FPVQEPPSRS YYGEAPRAYG 401 450 ENSP00000412388/1-976 LPYGPRYVPE EPRAHSTARP FYTEDFGRYR ERDVLARTYP HPRSSPAWAD ENSBTAP00000052147/1-975 PPCGPRYAPE EPRARPAARA FYTEDFGRYR NREALTRTYP HPRGSPAWGD bmy_14822T0/1-1022 PPCGPRYAPE EPRAHPAARL FYTEDFGRYR SRDALTRTYP HPRGSPAWGD BACU016120/1-525 PPCGPRYAPE EPRAPPAARP FYTEDFGRYR SRDALTRTYP HPRGSPAWGD 451 500 ENSP00000412388/1-976 WGPRPYRTLQ VVPPSDPDPL LASWHGGTGT SPPRLATDSR HYSRSWDNIL ENSBTAP00000052147/1-975 WGPRPYRTLQ VAPPPDPGPL LASWHGGTGT SPPRLATDSR HYSRSWDNIL bmy_14822T0/1-1022 WGPRPYRTLQ VAPPPDPGPL LASWHGGTGT SPPRLATDSR HYSRSWDNIL BACU016120/1-525 WGPRPYRTLQ VAPPPDPGPL LASWHGGTGT SPPRLATDSR HYSRSWDNIL 501 550 ENSP00000412388/1-976 APGPRREDPL GRGRSYENLL GREVREPRGV SPEGRRPPVV VNLSTSPRRY ENSBTAP00000052147/1-975 ASGPRREDPL GRGRSYENLL GHEAREPRGT SPEGRRPPVV VNLSTSPRRY bmy_14822T0/1-1022 APAPRREDPL GRGRSYENLL GREAQDPRGT SPEGRRPPVI VNLSTSPRRY BACU016120/1-525 APAPRREDPL GRGRSYENLL GREAQDPRGT SPEGRRPPVI VNLSTSPRRY 551 600 ENSP00000412388/1-976 AALSLSETSL TEKGRAGEGL GRNWYVTPEI TITDNDLRAT ERPSARAWEL ENSBTAP00000052147/1-975 AALSLSETSL SEKGRVGEGP GRNWYVTPEI TITDNDLRAA ERPAARSWEM bmy_14822T0/1-1022 AALSLSETSL SEKGRMGEGL ARNWYVTPEI TITDNDLRAA ERPSARSWEL BACU016120/1-525 AALSLSETSL SEKGRMGEGL ARN------- ---------- ---------- 601 650 ENSP00000412388/1-976 PGGRTRPPPH AAPDGPTSGR QRSLEQLDEL ITDLVIDSRP TAGQASEPAA ENSBTAP00000052147/1-975 PGSRPRQSQP AAPDGPASGR QRSLEQLDEL ITDLVIDSRS PAGQALEPTS bmy_14822T0/1-1022 PGSRPRPPPP AAPDGPASGR QRSLEQLDEL ITDLVIDSRP PAGQAPEPAS BACU016120/1-525 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000412388/1-976 DCLGPQLRRL LDSRPAGSGA PALAPPRSPP ASAGSAEEPA APGEAADASP ENSBTAP00000052147/1-975 DGLGRQLRRL LDSRPSGPGG PALA-PRSPP ASAGSAEEPA GQGQAADASP bmy_14822T0/1-1022 DGLGRQLRRL LDSRPSGAGV PTRA-PRSPP LSAGSAEEPA GPGQAADASP BACU016120/1-525 ---------- ---------- ---------- ----CAEEPA GPGQAADASP 701 750 ENSP00000412388/1-976 EPSADEDDLM TCSNARCRRT ETMFNACLYF KSCHSCYTYY CSRLCRREDW ENSBTAP00000052147/1-975 EPSADEDDLM TCSNARCGRT ETMFNACLYF KSCHSCYTYY CSRLCRREDW bmy_14822T0/1-1022 EPSADEDDLM TCSNVRCGRT ETMFNACLYF KSCHSCYTYY CSRLCRREDW BACU016120/1-525 EPSADEDDLM TCSNVRCGRT ETMFNACLYF KSCHSCYTYY CSRLCRREDW 751 800 ENSP00000412388/1-976 DAHKARCVYG RVGSVCRHVL QFCRDSGPVH RAFSRIARVG FLSRGRGVLF ENSBTAP00000052147/1-975 DAHKARCVYG RVGSVCRHVL QFCRDSGPVH RAFSRIARVG FLSRGRGVLF bmy_14822T0/1-1022 DAHKARCVYG RVGSVCRHVL QFCRDSGPVH RAFSRIARVG FLSRGRGVLF BACU016120/1-525 GAHKARCVYG RVGSVCRHVL QFCRDSGPVH RAFSRIARVG FLSRGRGVLF 801 850 ENSP00000412388/1-976 LGFPSPGSAD NFLRFGLEGL LLSPTYLSLR ELATHAAPLG SYARELAAAG ENSBTAP00000052147/1-975 LGFPSPGSAD NFLRFGLEGL LLSPTYLSLR ELATHAAPLG SYARELAAAG bmy_14822T0/1-1022 LGFPSPGSAD NFLRFGLEGL LLSPTYLSLR ELATHAAPLG SYARELAAAG BACU016120/1-525 LGFPSPGSAD NFLRFGLEGL LLSPTYLSLR ELATHAAPLG SYARELAAAG 851 900 ENSP00000412388/1-976 RLYEPAECFL LSVSVAVGPG TAPPGTPALP APAPRSHGPT VRKFAKVALA ENSBTAP00000052147/1-975 RLYEPAECFL LSVSVAVGPG ATPPGAPARP VPAPRSPGPT VRKFAKVALA bmy_14822T0/1-1022 RLYEPAECFL LSVSVAVGPG AALPGAPARP APAPRSPGPT VRKFAKVALA BACU016120/1-525 RLYEPA---- ---------- ---------- ---------- ---------- 901 950 ENSP00000412388/1-976 AGSPARPPPA RSREPDMETL ILTPPPGTAG LDQDGEAGRR AREVAFIHIQ ENSBTAP00000052147/1-975 AGSPARPPPA RGREPDMETL ILTPPPGTAG LDQDGEAGRR AREVAFIHIQ bmy_14822T0/1-1022 AGSPARPPPA RGREPDMETL ILTPPPGTAG LDQDGEAGRR AREVAFIHIQ BACU016120/1-525 --GPARPPPA RGREPDMETL ILTPPPGTAG LDQDGEAGRR AREVAFIHIQ 951 1000 ENSP00000412388/1-976 RELRLRGVFL RHEFPRVYEQ LCEFVEANRR FTPTTIYPTD RRTGRPFMCM ENSBTAP00000052147/1-975 RELRLRGVFL RHEFPRVYEQ LCEFVEANRR FTPTTIYPTD RRTGRPFMCM bmy_14822T0/1-1022 RELRLRGVFL RHEFPRVYEQ LCEFVEANRR FTPTTIYPTD RRTGRPFMCM BACU016120/1-525 RELRLRGVFL RHEFPRVYEQ LCEFVEANRR FTPTTIYPTD RRTGRPFMCM 1001 1050 ENSP00000412388/1-976 IMAASEPRAL DWVASANLLD DIM ENSBTAP00000052147/1-975 IMAASEPRAL DWVASANLLD DIM bmy_14822T0/1-1022 IMAASEPRAL DWVASANLLD DIM BACU016120/1-525 IMAASEPRAL DWVASANLLD DIM