KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:01:31 2014 Check: 00 .. Name: ENSP00000304250/1-367 Len: 373 Check: 8457 Weight: 1.00 Name: ENSBTAP00000052170/1-373 Len: 373 Check: 968 Weight: 1.00 Name: bmy_13365T0/1-370 Len: 373 Check: 3379 Weight: 1.00 Name: BACU012715/1-305 Len: 373 Check: 1366 Weight: 1.00 // 1 50 ENSP00000304250/1-367 MGTVLSLSPA SSAKGRRPGG LPEEKKKAPP AGDEALGGYG APPVGKGGKG ENSBTAP00000052170/1-373 MGTVLSLSPA SSAKGRRPGG LPEEKKKAPP AGDEALGGYG APPAGKGGKG bmy_13365T0/1-370 MGTVLSLSPA SSAKGRRPGG LPEEKKKAPP SGDEALGGYG APPVGKGGKG BACU012715/1-305 MGTVLSLSPA SSAKGRRPGG LPEEKKKAPP SGDEALGGYG APPVGKGGKG 51 100 ENSP00000304250/1-367 ESRLKRPSVL ISALTWKRLV AASAKKKKGS KKVTPKPAST GPDPLVQQRN ENSBTAP00000052170/1-373 ESRLKRPSVL ISALTWKRLV AASAKKKKGS KKVTPKPAST GPDPLVQQRN bmy_13365T0/1-370 ESRLKRPSVL ISALTWKRLV AASAKKKKGS KKVTPKPAST GADSLVQQRN BACU012715/1-305 ESRLKRPSVL ISALTWKRLV AASAKKKKGS KKVTPKPAST GADSLVQQRN 101 150 ENSP00000304250/1-367 RENLLRKGRD PPDGGGTAKP LAVPVPTVPA AAATCEPPSG GSAAAQPPGS ENSBTAP00000052170/1-373 RENLLRKGRD PPDGGGAAKP LAVPVPTVPA AAATCEPPSG SSAGVPPPGS bmy_13365T0/1-370 RENLLRKGRD PPDGGGAAKP LAVPVPTVPA AAATCEPPSG GSAVAPPPGS BACU012715/1-305 RENLLRKGRD PPDGGGAAX- ---------- ---------- ---------- 151 200 ENSP00000304250/1-367 GGGKPPPPPP PAPQVAPPVP GGSPRRVIVQ ASTGELLRCL GDFVCRRCYR ENSBTAP00000052170/1-373 GGGKPPPPPP PAPQAAPPVP GGSPRRVIVQ ASTGELLRCL GDFVCRRCYR bmy_13365T0/1-370 GGGKPPPPPP PAPQAAPPVP GGSPRRVIVQ ASTGELLRCL GDFVCRRCYR BACU012715/1-305 ---------- ---------- ---------- ----ELLRCL GDFVCRRCYR 201 250 ENSP00000304250/1-367 LKELSPGELV GWFRGVDRSL LLQGWQDQAF ITPANLVFVY LLCRESLRGD ENSBTAP00000052170/1-373 LKELSPGELV GWFRGVDRSL LLQGWQDQAF ITPANLVFVY LLCRESLRGD bmy_13365T0/1-370 LKELSPGELV GWFRGVDRSL LLQGWQDQAF ITPANLVFVY LLCRESLRGD BACU012715/1-305 LKELSPGELV GWFRGVDRSL LLQGWQDQAF ITPANLVFVY LLCRESLRGD 251 300 ENSP00000304250/1-367 ELASAAELQA AFLTCLYLAY SYMGNEISYP LKPFLVEPDK ERFWQRCLRL ENSBTAP00000052170/1-373 ELASAAELQA AFLTCLYLAY SYMGNEISYP LKPFLVEPDK ERFWQRCLRL bmy_13365T0/1-370 ELASAAELQA AFLTCLYLAY SYMGNEISYP LKPFLVEPDK ERFWQRCLRL BACU012715/1-305 ELASAAELQA AFLTCLYLAY SYMGNEISYP LKPFLVEPDK ERFWQRCLRL 301 350 ENSP00000304250/1-367 IQRLSPQMLR LNADPHFFTQ VFQDLKNEGE AAASGGGPPS GGAPAA---- ENSBTAP00000052170/1-373 IQRLSPQMLR LNADPHFFTQ VFQDLKNEGE ASASAGGPPN GGAPAAPSTS bmy_13365T0/1-370 IQRLSPQMLR LNADPHFFTQ VFQDLKNEGE AAAGAGGPPS GGAPAA---S BACU012715/1-305 IQRLSPQMLR LNADPHFFTQ VFQDLKNEGE AAAGAGGPPS GGAPAA---S 351 400 ENSP00000304250/1-367 --SSAARDSC AAGTKHWTMN LDR ENSBTAP00000052170/1-373 SSSSAARDSC ATGAKHWTMN LDR bmy_13365T0/1-370 SSSSAARDSC ATGAKHWTMN LDR BACU012715/1-305 SSSSAARDSC ATGAKHWTMN LDR