KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:34 2014 Check: 00 .. Name: bmy_14244T0/1-277 Len: 509 Check: 3554 Weight: 1.00 Name: ENSBTAP00000052186/1-397 Len: 509 Check: 7452 Weight: 1.00 Name: ENSP00000379658/1-452 Len: 509 Check: 9678 Weight: 1.00 Name: BACU016997/1-451 Len: 509 Check: 6434 Weight: 1.00 Name: ENSTTRP00000000741/1-452 Len: 509 Check: 444 Weight: 1.00 // 1 50 bmy_14244T0/1-277 MSPEGTEGA- ---------- ---------- ---------- ---------- ENSBTAP00000052186/1-397 LQP------- ---------- ---------- ---------- ---------- ENSP00000379658/1-452 MSETPAQCSI KQERISYTPP ESPVPSYASS TPLHVPVPRA LRMEEDSIRL BACU016997/1-451 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000741/1-452 MSETPAQCSI KQERISYTPP ESPVPSYTSS TPLHVPVPRA LRMEEDSIRL 51 100 bmy_14244T0/1-277 --------AV CHTDKYHRWR TWIRT--PLM HVDQKVNHVS FAPVLL---- ENSBTAP00000052186/1-397 --------MF WSRDDVAQWL KWAENEFSLR PIDSNTFEMN GKALLLLTKE ENSP00000379658/1-452 PAHLRLQPIY WSRDDVAQWL KWAENEFSLR PIDSNTFEMN GKALLLLTKE BACU016997/1-451 --------MY WSRDDVAQWL KWAENEFSLR PIDSNTFEMN GKALLLLTKE ENSTTRP00000000741/1-452 PAHLRLQPMY WSRDDVAQWL KWAENEFSLR PIDSSTFEMN GKALLLLTKE 101 150 bmy_14244T0/1-277 ---------G VCLW------ ----TPSVFA ALFCIHGGGV F--------- ENSBTAP00000052186/1-397 DFRYRSPHSG DVLYELLQHI LKQRKPRILF SPFFHPGNSI HTQQEVILHQ ENSP00000379658/1-452 DFRYRSPHSG DVLYELLQHI LKQRKPRILF SPFFHPGNSI HTQPEVILHQ BACU016997/1-451 DFRYRSPHSG DVLYELLQHI LKQRKPRILF SPFFHPGNSI HTQPEVILHQ ENSTTRP00000000741/1-452 DFRYRSPHSG DVLYELLQHI LKQRKPRILF SPFFHPGNSI HTQPEVILHQ 151 200 bmy_14244T0/1-277 ---------- --REIIRRTV IEFSKLEWLA FVGESLTYDR PTSGTGGER- ENSBTAP00000052186/1-397 NHEEDNGVQR TSRPSAENVH QNPPTIELLH RSRSPITTNH RPSPDPEQRP ENSP00000379658/1-452 NHEEDNCVQR TPRPSVDNVH HNPPTIELLH RSRSPITTNH RPSPDPEQRP BACU016997/1-451 NHEEDNCVQR TPRPSVENVH HNPPTIELLH RSRSPITTNH RPSPDPEQRP ENSTTRP00000000741/1-452 NHEEDNCVQR TPRPSVENVH HNPPTIELLH RSRSPITTNH RPSPDPEQRP 201 250 bmy_14244T0/1-277 ------RKLK KGSPGDAVFS KPCWLCVNCP SFYSLCSISL YN-------- ENSBTAP00000052186/1-397 LRSPLDNMIR RLSPAERAQG PRLHQENNHQ EPYPLSVSPM ENNHCPPSSE ENSP00000379658/1-452 LRSPLDNMIR RLSPAERAQG PRPHQENNHQ ESYPLSVSPM ENNHCPASSE BACU016997/1-451 LRSPLDNMIR RLSPAERAQG PRLHQENNHQ ESYPLSVSPM ENNHCPPSSE ENSTTRP00000000741/1-452 LRSPLDNMIR RLSPAERAQG PRLHQENNHQ ESYPLSVSPM ENNHCPPSSE 251 300 bmy_14244T0/1-277 ---------- ESLR------ --ITLPIQVH PKGVMK---- ---------- ENSBTAP00000052186/1-397 PHPRPSSPRQ EGTRVIQLMP SPIMHPLILN PRHSVDFKQP RLSEDGLHRE ENSP00000379658/1-452 SHPKPSSPRQ ESTRVIQLMP SPIMHPLILN PRHSVDFKQS RLSEDGLHRE BACU016997/1-451 PHQKPASPRQ ESTRVIQLMP SPIMHPLILN PRHSVDFKQS RLSEDGLHRE ENSTTRP00000000741/1-452 PHQKPSSPRQ ESTRVIQLMP SPIMHPLILN PRHSVDFKQS RLSEDGLHRE 301 350 bmy_14244T0/1-277 ---------- ---------- ---------- PLG------- ---------- ENSBTAP00000052186/1-397 GKPINLSHRE DLAYMNHIMV SVSPPEEHAV PIGRIA---- ---------- ENSP00000379658/1-452 GKPINLSHRE DLAYMNHIMV SVSPPEEHAM PIGRIA---- ---------- BACU016997/1-451 GKPINLSHRE DLAYMNHIMV SVSPPEEHAM PIGRIADPRG IDSSFTGSRI ENSTTRP00000000741/1-452 GKPINLSHRE DLAYMNHIMV SVSPPEEHAM PIGRIA---- ---------- 351 400 bmy_14244T0/1-277 ---------- ---------- ---------- ---------- ---DCRLLWD ENSBTAP00000052186/1-397 ---------- ---------- ---------- ---------- ---DCRLLWD ENSP00000379658/1-452 ---------- ---------- ---------- ---------- ---DCRLLWD BACU016997/1-451 HWVTHVQCKV LSLLDSHKSP SDLYKAAFRW ENVAFQMSPE GTEDCRLLWD ENSTTRP00000000741/1-452 ---------- ---------- ---------- ---------- ---DCRLLWD 401 450 bmy_14244T0/1-277 YVYQLLSDSR YENFIRWEDK ESKIFRIVDP NGLARLWGNH KNRTNMTYEK ENSBTAP00000052186/1-397 YVYQLLSDSR YENFIRWEDK ESKIFRIVDP NGLARLWGNH KNRTNMTYEK ENSP00000379658/1-452 YVYQLLSDSR YENFIRWEDK ESKIFRIVDP NGLARLWGNH KNRTNMTYEK BACU016997/1-451 YVYQLLSDSR YENFIRWEDK ESKIFRIVDP NGLARLWGNH KNRTNMTYEK ENSTTRP00000000741/1-452 YVYQLLSDSR YENFIRWEDK ESKIFRIVDP NGLARLWGNH KNRTNMTYEK 451 500 bmy_14244T0/1-277 MSRALRHYYK LNIIRKEPGQ RLLFRFMKTP DEIMSGRTDR LEHLESQELD ENSBTAP00000052186/1-397 MSRALRHYYK LNIIRKEPGQ RLLFRFMKTP DEIMSGRTDR LEHLESQELD ENSP00000379658/1-452 MSRALRHYYK LNIIRKEPGQ RLLFRFMKTP DEIMSGRTDR LEHLESQELD BACU016997/1-451 MSRALRHYYK LNIIRKEPGQ RLLFRFMKTP DEIMSGRTDR LEHLESQELD ENSTTRP00000000741/1-452 MSRALRHYYK LNIIRKEPGQ RLLFRFMKTP DEIMSGRTDR LEHLESQELD 501 550 bmy_14244T0/1-277 EQIYQEDEC ENSBTAP00000052186/1-397 EQIYQEDEC ENSP00000379658/1-452 EQIYQEDEC BACU016997/1-451 EQIYQEDEC ENSTTRP00000000741/1-452 EQIYQEDEC