KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 18:01:34 2014 Check: 00 ..
Name: ENSP00000420588/1-246 Len: 291 Check: 3457 Weight: 1.00
Name: ENSBTAP00000052192/1-246 Len: 291 Check: 1292 Weight: 1.00
Name: ENSTTRP00000008768/1-242 Len: 291 Check: 5016 Weight: 1.00
Name: bmy_17642T0/1-285 Len: 291 Check: 7700 Weight: 1.00
Name: BACU006367/1-240 Len: 291 Check: 3895 Weight: 1.00
//
1 50
ENSP00000420588/1-246 ---------- ---------- ---------- ---------- -----MAFLR
ENSBTAP00000052192/1-246 ---------- ---------- ---------- ---------- -----MALLR
ENSTTRP00000008768/1-242 ---------- ---------- ---------- ---------- -----MALLR
bmy_17642T0/1-285 ALRVAGLIAD LVDSSWVPVV LVGVVLLCPG AVRDWGLVSA SSADAMALLR
BACU006367/1-240 ---------- ---------- ---------- ---------- -----MALLR
51 100
ENSP00000420588/1-246 SMWGVLSALG RSGAELCTGC GSRLRSPFSF VYLPRWFSSV LASCPKKPVS
ENSBTAP00000052192/1-246 GVWGVLNALG KSGADLCAGC GSRLRSPFSF AYVPKWFSSS LSGYPKKPMT
ENSTTRP00000008768/1-242 GVWGVLSALG KSGADLCAGC GSRLRSPLSF ANVRRWFSSN FIGYPKKPMT
bmy_17642T0/1-285 GVWGVLSALG KSGADLCAGC GSRLRSPLSF ANVPRWFSSN VIGYPKKPMT
BACU006367/1-240 GVWGVLSALG KSGADLCKGC GSRLRSPLSF ANVPRWFSSN FIGYPKKPMT
101 150
ENSP00000420588/1-246 SYLRFSKEQL PIFKAQNPDA KTTELIRRIA QRWRELPDSK KKIYQDAYRA
ENSBTAP00000052192/1-246 SYVRFSKEQL PIFKAQNPDA KNSELIKKIA KLWRELPDSE KKIYEDAYRA
ENSTTRP00000008768/1-242 SYVRFSKEQL PIFKAQNPDA KNSELIKKIA ELWRELPDAE KKMYEDAYRT
bmy_17642T0/1-285 SYVRFSKEQL PIFKAQNPDA KISELIKKIA ELWRELPDAE KKIYEDAYRT
BACU006367/1-240 SYVRFSKEQL PIFKAQNPDA KNSELIKKIA ELWRELPDAE KKIYEDAYRT
151 200
ENSP00000420588/1-246 EWQVYKEEIS RFKEQLTPSQ IMSLEKEIMD KHLKRKAMTK KKELTLLGKP
ENSBTAP00000052192/1-246 DWQVYKEEIN RIQEQLTPSQ MVSLEKEIMQ KRLKKKALIK KRELTMLGKP
ENSTTRP00000008768/1-242 DWQAYKEEIN RIKEQLTPSQ LVSLEKEIMQ KRLKKKALIK KRETM----K
bmy_17642T0/1-285 DWQAYKEEIN RIQEQLTPSQ MVSLEKEIMQ KRLKKKALIK KRELTMLGKP
BACU006367/1-240 DWQAYKEEIN RIQEQLTPSQ IVSLEKEIMQ KRLKKKALIK KRELTMLGKP
201 250
ENSP00000420588/1-246 KRPRSAYNVY VAERFQEAKG DSPQEKLKTV KENWKNLSDS EKELYIQHAK
ENSBTAP00000052192/1-246 KRPRSAYNIF IAERFQEARD GTSQVKLKAI NENWKNLSNS QKQVYIQLAK
ENSTTRP00000008768/1-242 KRPRSAYNIK IAERFQEAKD GTSQVKLKTI NESWKNLSSS QKQVYIQLAK
bmy_17642T0/1-285 KRPRSAYNIF IAERFQEAKD GTSQVKLKTV NESWKNLSSS QKQVYIQLAK
BACU006367/1-240 KRPRSAYNIF IAERFQEAKD GTSQVKLKAV NESWKNLSSS QKQVYIQLAK
251 300
ENSP00000420588/1-246 EDETRYHNEM KSWEEQMIEV GRKDLLRRTI KKQRKYGAEE C
ENSBTAP00000052192/1-246 DDKIRYYNEM KSWEEQMMEV GREDLIRRSI KYPAKNDPEK F
ENSTTRP00000008768/1-242 DDKVRYYNEM KSWEEQMVEV GRDDLVRRSV NTQQNSDPEK Y
bmy_17642T0/1-285 DDKVRYXNEM KSWEEQMVEV GRDDLVRRSV KYTAK----- -
BACU006367/1-240 DDKVRYYNEM KSWEEQMVEV GRDDLVRRSV KYTAK----- -