KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:01:36 2014 Check: 00 .. Name: ENSP00000378920/1-759 Len: 1692 Check: 1016 Weight: 1.00 Name: ENSBTAP00000052325/1-763 Len: 1692 Check: 762 Weight: 1.00 Name: bmy_05982T0/1-992 Len: 1692 Check: 8653 Weight: 1.00 Name: BACU002418/1-1467 Len: 1692 Check: 9108 Weight: 1.00 // 1 50 ENSP00000378920/1-759 MGLADA---- ---------- ---------- ---------- ---------- ENSBTAP00000052325/1-763 MGLSEA---- ---------- ---------- ---------- ---------- bmy_05982T0/1-992 MGLSEALGGG ATGLEDLCEP AMPRVSEDRP RTHSTASSNG DIQVRGPFQV BACU002418/1-1467 MGLSEA---- ---------- ---------- ---------- ---------- 51 100 ENSP00000378920/1-759 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052325/1-763 ---------- ---------- ---------- ---------- ---------- bmy_05982T0/1-992 SSCPSGGNLT VGQSFSQIRT FLTGEAFPSR GELPSRGFSC EERLAWFAGF BACU002418/1-1467 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000378920/1-759 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052325/1-763 ---------- ---------- ---------- ---------- ---------- bmy_05982T0/1-992 LPCVCSQTAC AGLVGQLDKD SDWTGIGWRR VGAGRRGLGG TVSLEPRLVN BACU002418/1-1467 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000378920/1-759 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052325/1-763 ---------- ---------- ---------- ---------- ---------- bmy_05982T0/1-992 TQGWTEVWIV FILLPLCGGL WPSKSLPPAK VQGLQEPAGG LDLPRSWDLE BACU002418/1-1467 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000378920/1-759 ---------- ---------- ---------S GPRDTQALLS ATQAMDLRRR ENSBTAP00000052325/1-763 ---------- ---------- ---------P GERDTQALLS RTQAMELRRR bmy_05982T0/1-992 KSGGRLCGPR WRSRGGWARS ALTVSLASPP RQRDTQALLS TTQAMELRRR BACU002418/1-1467 ---------- ---------- ---------P GQRDAQALLS TMQAMELRRR 251 300 ENSP00000378920/1-759 DYHMERPLLN QEHLEELGRW GSAPRTHQWR TWLQCSRARA YALLLQHLPV ENSBTAP00000052325/1-763 DYHVERPLLN QEQLEELGSR SPAQVTLQWR TWFRCSRARA QALLLQYLPV bmy_05982T0/1-992 DYHVERPLLN QEQLEELGSR SSATGTLQWR TWFRCSHARA RALLLQYFPV BACU002418/1-1467 DYHVERPLLN QEQLEELGSR SSATGTLQWR TWFRCSHARA QALLLQYFPV 301 350 ENSP00000378920/1-759 LVWLPRYPVR DWLLGDLLSG LSVAIMQLPQ GLAYALLAGL PPVFGLYSSF ENSBTAP00000052325/1-763 LAWLPQYSVR DWLLGDLLSG LSVAIMQLPQ GLAYALLAGL PPVFGLYSSF bmy_05982T0/1-992 LAWLPQYPVR DWLLGDLLSG LSVAIMQLPQ GLAYALLAGL PPVFGLYSSF BACU002418/1-1467 LAWLPQYPVR DWLLGDLLSG LSVAIMQLPQ GLAYALLAGL PPVFGLYSSF 351 400 ENSP00000378920/1-759 YPVFIYFLFG TSRHISVGTF AVMSVMVGSV TESLAPQAL- ---NDSMINE ENSBTAP00000052325/1-763 YPVFVYFLFG TSRHISVGTF AVMSVMVGSV MESLAPDDAF LLGLNSTLDV bmy_05982T0/1-992 YPVFIYFLFG TSRHISVGTF AVMSVMVGSV TESLAPDEAF LQASNSTVDV BACU002418/1-1467 YPVFIYFLFG TSRHISVGTF AVMSVMVGSV TESLAPDEAF LQASNSTVDV 401 450 ENSP00000378920/1-759 TARDAARVQV ASTLSVLVGL FQVGLGLIHF GFVVTYLSEP LVRGYTTAAA ENSBTAP00000052325/1-763 AARDATRVQL ASTLSVLVGL FQVGLGMVHF GFVVTYLSEP LVRAYTTAAS bmy_05982T0/1-992 AARDAARVQV ASTLSVLVGL FQVGLGLVHF GFVVTYLSEP LVRAYTTAAS BACU002418/1-1467 AARDAARVQV ASTLSVLVGL FQVGLGLVHF GFVVTYLSEP LVRAYTTAAS 451 500 ENSP00000378920/1-759 VQVFVSQLKY VFGLHLSSHS GPLSLIYTVL EVCWKLPQSK VGTVVTAAVA ENSBTAP00000052325/1-763 VHVFVSQLKY VFGLHLSSRS GPLSLIYTVL EVCWKLPQMV VGTMVTAIVA bmy_05982T0/1-992 VQVFVSQLKY VFGLHLSSRS GPLSLIYTVL EVCWKLPQTV VGTMVTAVVA BACU002418/1-1467 VQVFVSQLKY VFGLHLSSRS GPLSLIYTVL EVCWKLPQTV VGTMVTAVVA 501 550 ENSP00000378920/1-759 GVVLVVVKLL NDKLQQQLPM PIPGELLTLI GATGISYGMG LKHRFEVDVV ENSBTAP00000052325/1-763 GVVLVLVKLL NEKLRRHLPM PLPGELLTLI GATGISYGVG LKQAFGVDIV bmy_05982T0/1-992 GVVLVLVKLL NDKLRRQLPM PLPGELLTLI GATGISYGVG LQHRFGVDVV BACU002418/1-1467 GVVLVLVKLL NDKLRRQLPM PLPGELLTLI GATGISYGVG LQHRFGVDVV 551 600 ENSP00000378920/1-759 GNIPAGLVPP VAPNTQLFSK LVGSAFTIAV VGFAIAISLG KIFALRHGYR ENSBTAP00000052325/1-763 GKIPTGLVPP MAPRPQLFAK LLGNAFAIAV VGFAIAISLG KIFALRHGYR bmy_05982T0/1-992 GKIPAGLVPP VAPSPQLFAR LVGNAFAIAV VGFAIAISLG KIFALRHGYR BACU002418/1-1467 GKIPAGLVPP VAPSPQLFAR LVGNAFAIAV VGFAIAISLG KIFALRHGYR 601 650 ENSP00000378920/1-759 VDSNQELVAL GLSNLIGGIF QCFPVSCSMS RSLVQESTGG NSQVAGAISS ENSBTAP00000052325/1-763 VYSNQELVAL GLSNLLGGIF QCFPVSCSMS RSLVQESTGG NTQVAGAISS bmy_05982T0/1-992 VDSNQELVAL GLSNLIGGIF QCFPVSCSMS RSLVQESTGG NTQVAGAISS BACU002418/1-1467 VDSNQELVAL GLSNLIGGIF QCFPVSCSMS RSLVQESTGG NTQVAGAISS 651 700 ENSP00000378920/1-759 LFILLIIVKL GELFHDLPKA VLAAIIIVNL KGMLRQLSDM RSLWKANRAD ENSBTAP00000052325/1-763 LFILIIIVKL GELFQDLPKA VLAAVVIVNL KGMVMQCTDV VSLWKANRMD bmy_05982T0/1-992 LFILIIIVKL GELFQDLPKA VLAAAIIVNL KGMLMQFTDI CSLWKANRVD BACU002418/1-1467 LFILIIIVKL GELFQDLPKA VLAAAIIVNL KGMLMQFTDI RSLWKANRVD 701 750 ENSP00000378920/1-759 LLIWLVTFTA TILLNLDLGL VVAVIFSLLL VVVRTQMPHY SVLGQVPDTD ENSBTAP00000052325/1-763 LLIWVVTFVA TILLNLDLGL AVAVVFSLML VVVRTQMPHY SVLGQVPDTD bmy_05982T0/1-992 LLIWLVTFVA TILLNLDLGL AVAVVFSLLL VVVRTQLPHY SVLGQVPDTD BACU002418/1-1467 LLIWLVTFVA TILLNLDLGL AVAVVFSLLL VVVRTQLPHY SVLGQVPDTD 751 800 ENSP00000378920/1-759 IYRDVAEYSE AKEVRGVKVF RSSATVYFAN AEFYSDALKQ RCGVDVDFLI ENSBTAP00000052325/1-763 IYRDVAEYSG AREVPGVKVF RSSVTVYFAN AELYSDSLKQ RCGVDVDYLL bmy_05982T0/1-992 IYRDVAEYSE AREVPGVKVF RSSATMYFAN AELYSDTLKQ RCGVNVDHLI BACU002418/1-1467 IYRDVAEYSE AREVPGVKVF RSSATMYFAN AELYSDTLKQ RCGVNVDHLI 801 850 ENSP00000378920/1-759 SQKKKLLKKQ EQLKLKQLQK EEKLRKQ--- -----AASPK GASVSINVNT ENSBTAP00000052325/1-763 SQKKKLLRKQ E-LKLKQLQK ENKLPKQ--- -----AAASK GTSVSINVNP bmy_05982T0/1-992 SQKKKLLRKQ E-LKLKRLQK ENKLPKQAGA LLTPPAAASK GTSISINVNT BACU002418/1-1467 SQKKKLLRKQ E-LKLKRLQK ENKLPKQAGA LLTPPAAASK GTSISINVNT 851 900 ENSP00000378920/1-759 SLEDMRS-NN VEDCKMMQVS SGDKMEDATA NGQEDSKAPD GSTLKALGLP ENSBTAP00000052325/1-763 TVMDIESNND VEGSKAREAS AGTELEDTGA WAPEDAKASD ISSLKALGLP bmy_05982T0/1-992 SVTDIES-ND VEGSKAK-VS AGTELEDTAA RGQEDAKAPD MSSLKTLGLP BACU002418/1-1467 SVTDIES-ND VEGSKAKQVS AGTELEDTAA RGQEDAKAPD MSSLKTLGLP 901 950 ENSP00000378920/1-759 QPDFHSLILD LGALSFVDTV CLKSLKNIFH DFREIEVEVY MAACHSPVVS ENSBTAP00000052325/1-763 QPDFHTLILD LSSFSFVDTV CLKSLKNIFR DFREIEVEVY MAACHAPVIT bmy_05982T0/1-992 QPDFHSLILD LSSLSFVDTV CLKSLKNIFR DFREIEVEVY MAACHSPVVT BACU002418/1-1467 QPDFHSLILD LSSLSFVDTV CLKSLKNIFR DFREIEVEVY MAACHSPVVT 951 1000 ENSP00000378920/1-759 QLEAGHFFDA SITKKHLFAS VHDAVTFALQ HPRPVPDSPV SVTRL----- ENSBTAP00000052325/1-763 QLEDGHFFDA SITKQHLFAS VHDAVLFALQ HRRSGPVNPV LVTKL----- bmy_05982T0/1-992 QLEAGHFFDA SITKQHLFAS VHDAVIFALQ HPRSSPVNPV LVTKL----- BACU002418/1-1467 QLEVGHFFDA SITKQHLFAS VHDAVIFALQ HPRSSPVNPV LAPRFRPLVL 1001 1050 ENSP00000378920/1-759 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052325/1-763 ---------- ---------- ---------- ---------- ---------- bmy_05982T0/1-992 ---------- ---------- ---------- ---------- ---------- BACU002418/1-1467 AAAMLHAQSF LPWLLLLAMP VRTHTWSRPL WYQVGLDLQP WGCQPNSLEG 1051 1100 ENSP00000378920/1-759 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052325/1-763 ---------- ---------- ---------- ---------- ---------- bmy_05982T0/1-992 ---------- ---------- ---------- ---------- ---------- BACU002418/1-1467 CKGSLGCPGH WMGLGVNRIY PVAGVTVATT MMLMLSRAVM QRRRSQATKS 1101 1150 ENSP00000378920/1-759 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052325/1-763 ---------- ---------- ---------- ---------- ---------- bmy_05982T0/1-992 ---------- ---------- ---------- ---------- ---------- BACU002418/1-1467 EHPQVTANPC APWKRRAPIS DRALLLGVLH MLDALLVHIE GHLQRLATQQ 1151 1200 ENSP00000378920/1-759 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052325/1-763 ---------- ---------- ---------- ---------- ---------- bmy_05982T0/1-992 ---------- ---------- ---------- ---------- ---------- BACU002418/1-1467 RTQIKETPAQ SGASTPIEAS VPIDGWGAAE RQVCGTAPAP RAPLRPLYAC 1201 1250 ENSP00000378920/1-759 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052325/1-763 ---------- ---------- ---------- ---------- ---------- bmy_05982T0/1-992 ---------- ---------- ---------- ---------- ---------- BACU002418/1-1467 VARLSVHWRQ KMAASAVCRA AGAGTRVLVR SCRSQPALLR SPVLRGIATY 1251 1300 ENSP00000378920/1-759 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052325/1-763 ---------- ---------- ---------- ---------- ---------- bmy_05982T0/1-992 ---------- ---------- ---------- ---------- ---------- BACU002418/1-1467 AQALQSVPET QVSQLDNGLR VASEQSSQPT CTVGVWIDAG SRYETEKNNG 1301 1350 ENSP00000378920/1-759 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052325/1-763 ---------- ---------- ---------- ---------- ---------- bmy_05982T0/1-992 ---------- ---------- ---------- ---------- ---------- BACU002418/1-1467 AGYFVEHLAF KGTKNRPGSA LEKEVESMGA HLNAYSTREH TAYYIKALSK 1351 1400 ENSP00000378920/1-759 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052325/1-763 ---------- ---------- ---------- ---------- ---------- bmy_05982T0/1-992 ---------- ---------- ---------- ---------- ---------- BACU002418/1-1467 DLPKAVELLA DIVQNCSLED SQVEKERDVI LQELQENDAS MRDVVFDYLH 1401 1450 ENSP00000378920/1-759 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052325/1-763 ---------- ---------- ---------- ---------- ---------- bmy_05982T0/1-992 ---------- ---------- ---------- ---------- ---------- BACU002418/1-1467 ATAFQGTPLA QAVEGSSENV RKLSRADLTE YLSRHYKASR MVLAAAGGVE 1451 1500 ENSP00000378920/1-759 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052325/1-763 ---------- ---------- ---------- ---------- ---------- bmy_05982T0/1-992 ---------- ---------- ---------- ---------- ---------- BACU002418/1-1467 HRQLLDLAQK HFCSLSGTYA EDAVPTLTPC RFTGSEIRHR DDALPLAHVA 1501 1550 ENSP00000378920/1-759 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052325/1-763 ---------- ---------- ---------- ---------- ---------- bmy_05982T0/1-992 ---------- ---------- ---------- ---------- ---------- BACU002418/1-1467 IAVEGPGWAN PDNVALQVAN AIIGHYDCTY GGGTHLSSPL AAVAATKKLC 1551 1600 ENSP00000378920/1-759 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052325/1-763 ---------- ---------- ---------- ---------- ---------- bmy_05982T0/1-992 ---------- ---------- ---------- ---------- ---------- BACU002418/1-1467 QSFQTFNICY AETGLLGAHF VCDHMSIDDM MFFLQGQWMR LCTSATESEV 1601 1650 ENSP00000378920/1-759 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052325/1-763 ---------- ---------- ---------- ---------- ---------- bmy_05982T0/1-992 ---------- ---------- ---------- ---------- ---------- BACU002418/1-1467 VRGKNILRNA LVSHLDGTTP VCEDIGRSLL TYGRRIPLAE WESRIAEVDA 1651 1700 ENSP00000378920/1-759 ---------- ---------- ---------- ---------- -- ENSBTAP00000052325/1-763 ---------- ---------- ---------- ---------- -- bmy_05982T0/1-992 ---------- ---------- ---------- ---------- -- BACU002418/1-1467 SIVREVCSKY FYDQCPAVAG LGPIEQLPDY NRIRSGMFWL RF