KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:37 2014 Check: 00 .. Name: ENSP00000360436/1-477 Len: 477 Check: 6430 Weight: 1.00 Name: ENSBTAP00000052332/1-363 Len: 477 Check: 6646 Weight: 1.00 Name: ENSTTRP00000007982/1-477 Len: 477 Check: 7646 Weight: 1.00 Name: bmy_00017T0/1-477 Len: 477 Check: 897 Weight: 1.00 Name: BACU019450/1-477 Len: 477 Check: 9592 Weight: 1.00 // 1 50 ENSP00000360436/1-477 MTSKFLLVSF ILAALSLSTT FSLQPDQQKV LLVSFDGFRW DYLYKVPTPH ENSBTAP00000052332/1-363 ---------- ---------- -------PKV LLVSFDGFRW DYLYRVPTPH ENSTTRP00000007982/1-477 MTSNLLWVSF LLAALTLSIT FSLQPDQPKV LLVSFDGFRW DYLYRVPTPH bmy_00017T0/1-477 MTSKLLWVSF ILAALTLSIT FSLQPDQPKV LLVSFDGLRW DYLYRVPTPH BACU019450/1-477 MTSKLLWVSF ILAALTLSIT FSLQPDQPKV LLVSFDGLRW DYLYRVPTPH 51 100 ENSP00000360436/1-477 FHYIMKYGVH VKQVTNVFIT KTYPNHYTLV TGLFAENHGI VANDMFDPIR ENSBTAP00000052332/1-363 FHYIMKYGVQ VQQVTNIFIT KTYPNHYTLV TGLFAENHGI VANDMYDPIL ENSTTRP00000007982/1-477 FHHVKEYGVH VKQVTNIFIT KTYPNHYTLI TGLFAENHGI VANDMFDPVL bmy_00017T0/1-477 FHHVXKYGVH VKQVTNIFIT KTYPNHYTLV TGLFAENHGV VANDMFDPVL BACU019450/1-477 FHHVIKYGVH VKQVTNIFIT KTYPNHYTLV TGLFAENHGI VANDMFDPVL 101 150 ENSP00000360436/1-477 NKSFSLDHMN IYDSKFWEEA TPIWITNQRA GHTSGAAMWP GTDVKIHKRF ENSBTAP00000052332/1-363 NKSFSLDDMD IYDSEFWEEA TPIWITNQRA GHTSGAAMWP GTDVKIHGSF ENSTTRP00000007982/1-477 NKSFSLDNMN IYDSEFWEEA TPIWITNQRA GHTSGAAMWP GTDVKIHKSF bmy_00017T0/1-477 NKSFSLDNMN IYDSEFWEEA TPIWITNQRA GHTSGAAMWP GTDVKIHKSF BACU019450/1-477 NKSFSLDNMN IYDSEFWEEA TPIWITNQRA GHTSGAAMWP GTDVKIHKSF 151 200 ENSP00000360436/1-477 PTHYMPYNES VSFEDRVAKI IEWFTSKEPI NLGLLYWEDP DDMGHHLGPD ENSBTAP00000052332/1-363 PTHYMPYNDS VSFEDRVAKI IEWFTSKEPI SLGLLYWEEP DDMGHQLGPD ENSTTRP00000007982/1-477 PTYYMPYNES VSFEERVAKI IEWFTSKEPI NLGLLYWEEP DDMGHLLGPD bmy_00017T0/1-477 PTYYMPYNES VSFEERVAKI IEWFTSKEPI NLGLLYWEEP DDMGHHLGPD BACU019450/1-477 PTYYMPYNES VSFEERVAKI IDWFTSKEPI NLGLLYWEEP DDMGHHLGPD 201 250 ENSP00000360436/1-477 SPLMGPVISD IDKKLGYLIQ MLKKAKLWNT LNLIITSDHG MTQCSEERLI ENSBTAP00000052332/1-363 SPLMGPVISD IDHKLGYLIQ MLKKAKLWNV LNLIITSDHG MTQCSQERII ENSTTRP00000007982/1-477 SPLMGPVISD IDQRLGYLIR MLKKAKLWNV LNLIITSDHG MTQCSEERII bmy_00017T0/1-477 SPLMGPVISD IDQKLGYLIR MLKKAKLWNI LNLIITSDHG MTQCSEERII BACU019450/1-477 SPLMGPVISD IDQKLGYLIR MLKKAKLWNI LNLIITSDHG MTQCSEERII 251 300 ENSP00000360436/1-477 ELDQYLDKDH YTLIDQSPVA AILPKEGKFD EVYEALTHAH PNLTVYKKED ENSBTAP00000052332/1-363 ELDQYLDREH YTLIDQSPVA AILPREGKFD EVYEALAQAH PNLTVYKKEE ENSTTRP00000007982/1-477 ELDQYLDKDH YTLIDKSPVA AILPKEGRFD EVYEALAHAH PNLTVYKKEE bmy_00017T0/1-477 ELDQYLDKDH YTLIDQSPVA AVLPKEGKFD EVYEALAHAH PNLTVYKKEE BACU019450/1-477 ELDQYLDKDH YTLIDQSPVA AVLPKEGKFD EVYEALAHAH PNLTVYKKEE 301 350 ENSP00000360436/1-477 VPERWHYKYN SRIQPIIAVA DEGWHILQNK SDDFLLGNHG YDNALADMHP ENSBTAP00000052332/1-363 VPERWHYKHN SRIQPILAVA DDGWHILRNK S-EVKLGNHG YDNALAEMHP ENSTTRP00000007982/1-477 IPDRWHYKHN SRIQPILAVA DEGWYILRNK SDDFLLGNHG YDNALAEMHP bmy_00017T0/1-477 IPERWHYKYN SRIQPVLAVA DEGWYILRNK SDDFLLGNHG YDNALAEMHP BACU019450/1-477 IPERWHYKYN SRIQPVLAVA DEGWYILRNK SDDFLLGNHG YDNALAEMHP 351 400 ENSP00000360436/1-477 IFLAHGPAFR KNFSKEAMNS TDLYPLLCHL LNITAMPHNG SFWNVQDLLN ENSBTAP00000052332/1-363 IFLAHGPAFR KNFTKAAMNS TDLYPLLCHL LNITALPHNG S--------- ENSTTRP00000007982/1-477 MFLAHGPAFR KNFTKEAMNS TDLYPLLCHL LNITAVPHNG SLRNVQDLLS bmy_00017T0/1-477 IFLAHGPAFR KNFTKEAMNS TDLYPLLCHL LNITAVPHNG SLRNVQDLLS BACU019450/1-477 IFLAHGPAFR KNFTKEAMNS TDLYPLLCHL LNITAVPHNG SLRNVQDLLS 401 450 ENSP00000360436/1-477 SAMPRVVPYT QSTILLPGSV KPAEYDQEGS YPYFIGVSLG SIIVIVFFVI ENSBTAP00000052332/1-363 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007982/1-477 SPTPRASPYT QSPPLLHGSV KPRENEQEEP YAYFIGVSLG SIIVIVFLII bmy_00017T0/1-477 SPTPRASPYT QSPPLLHGSV KPRENEQEEP YAYFIGVSLG STIVIVFLII BACU019450/1-477 SPTPRASPYT QSPPLLHGSV KPRENEQEEP YASFIGVSLG SIIVIVFLII 451 500 ENSP00000360436/1-477 FIKHLIHSQI PALQDMHAEI AQPLLQA ENSBTAP00000052332/1-363 ---------- ---------- ------- ENSTTRP00000007982/1-477 FIKHLIRSQI PALPDFQAEI SQPLLQA bmy_00017T0/1-477 FIKHLIRSQI PALPDFQAEI SQPLLQA BACU019450/1-477 FIKHLTRSQI PALPDFQAEI SQPLLQA